RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 LMBR1LQ6UX01 489 aa18.77■□□□□ 0.6
RPP40-202ENST00000380051 SSH3Q8TE77 659 aa18.77■□□□□ 0.6
RPP40-202ENST00000380051 SRGAP3O43295 1099 aa18.77■□□□□ 0.59
RPP40-202ENST00000380051 CTSWP56202 376 aa18.77■□□□□ 0.59
RPP40-202ENST00000380051 POLA2Q14181 598 aa18.77■□□□□ 0.59
RPP40-202ENST00000380051 NLRP3Q96P20 1036 aa18.77■□□□□ 0.59
RPP40-202ENST00000380051 MTFR1LQ9H019 292 aa18.77■□□□□ 0.59
RPP40-202ENST00000380051 CASZ1Q86V15 1759 aa18.76■□□□□ 0.59
RPP40-202ENST00000380051 PNMA6EA0A0J9YXQ4 647 aa18.76■□□□□ 0.59
RPP40-202ENST00000380051 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
RPP40-202ENST00000380051 TTLL11Q8NHH1 800 aa18.76■□□□□ 0.59
RPP40-202ENST00000380051 MYH3P11055 1940 aa18.76■□□□□ 0.59
RPP40-202ENST00000380051 DDX60Q8IY21 1712 aaKnown RBP18.75■□□□□ 0.59
RPP40-202ENST00000380051 NRXN2Q9P2S2 1712 aa18.75■□□□□ 0.59
RPP40-202ENST00000380051 LAMB2P55268 1798 aa18.75■□□□□ 0.59
RPP40-202ENST00000380051 IGHDP01880 384 aa18.75■□□□□ 0.59
RPP40-202ENST00000380051 SF3B3Q15393 1217 aaKnown RBP18.75■□□□□ 0.59
RPP40-202ENST00000380051 RIC1Q4ADV7 1423 aa18.75■□□□□ 0.59
RPP40-202ENST00000380051 PSDA5PKW4 1024 aaPredicted RBP18.74■□□□□ 0.59
RPP40-202ENST00000380051 CCDC152Q4G0S7 254 aa18.74■□□□□ 0.59
RPP40-202ENST00000380051 CHMP3Q9Y3E7 222 aa18.74■□□□□ 0.59
RPP40-202ENST00000380051 ABCC12Q96J65 1359 aa18.74■□□□□ 0.59
RPP40-202ENST00000380051 ABCB7O75027 752 aa18.73■□□□□ 0.59
RPP40-202ENST00000380051 ZBTB7AO95365 584 aa18.73■□□□□ 0.59
RPP40-202ENST00000380051 DCTPP1Q9H773 170 aa18.73■□□□□ 0.59
RPP40-202ENST00000380051 CCDC57Q2TAC2 916 aa18.72■□□□□ 0.59
RPP40-202ENST00000380051 CENPQQ7L2Z9 268 aaPredicted RBP18.72■□□□□ 0.59
RPP40-202ENST00000380051 CCDC24Q8N4L8 307 aa18.72■□□□□ 0.59
RPP40-202ENST00000380051 GCC1Q96CN9 775 aa18.72■□□□□ 0.59
RPP40-202ENST00000380051 BRIP1Q9BX63 1249 aa18.72■□□□□ 0.59
RPP40-202ENST00000380051 RTL9Q8NET4 1388 aa18.72■□□□□ 0.59
RPP40-202ENST00000380051 POLD1P28340 1107 aa18.71■□□□□ 0.59
RPP40-202ENST00000380051 RFX5P48382 616 aaPredicted RBP18.71■□□□□ 0.59
RPP40-202ENST00000380051 IFIT5Q13325 482 aaKnown RBP18.71■□□□□ 0.59
RPP40-202ENST00000380051 ANKRD18BA2A2Z9 1011 aa18.71■□□□□ 0.59
RPP40-202ENST00000380051 KLRG2A4D1S0 409 aaPredicted RBP18.71■□□□□ 0.59
RPP40-202ENST00000380051 GREM2Q9H772 168 aa18.71■□□□□ 0.59
RPP40-202ENST00000380051 COPRSQ9NQ92 184 aa18.71■□□□□ 0.59
RPP40-202ENST00000380051 ATF5Q9Y2D1 282 aaPredicted RBP18.71■□□□□ 0.59
RPP40-202ENST00000380051 NOP58Q9Y2X3 529 aaKnown RBP18.71■□□□□ 0.59
RPP40-202ENST00000380051 KDM2BQ8NHM5 1336 aa18.7■□□□□ 0.58
RPP40-202ENST00000380051 ITGA6P23229 1130 aa18.7■□□□□ 0.58
RPP40-202ENST00000380051 PDE6BP35913 854 aa18.7■□□□□ 0.58
RPP40-202ENST00000380051 FAM161AQ3B820 660 aa18.7■□□□□ 0.58
RPP40-202ENST00000380051 HSP90AB4PQ58FF6 505 aa18.7■□□□□ 0.58
RPP40-202ENST00000380051 SMC5Q8IY18 1101 aa18.7■□□□□ 0.58
RPP40-202ENST00000380051 CCDC85AQ96PX6 553 aaPredicted RBP18.7■□□□□ 0.58
RPP40-202ENST00000380051 SURF6O75683 361 aaKnown RBP18.69■□□□□ 0.58
RPP40-202ENST00000380051 PTPN12Q05209 780 aaKnown RBP18.69■□□□□ 0.58
RPP40-202ENST00000380051 C3orf67Q6ZVT6 689 aa18.69■□□□□ 0.58
RPP40-202ENST00000380051 FBXO3Q9UK99 471 aa18.69■□□□□ 0.58
RPP40-202ENST00000380051 PDZRN3Q9UPQ7 1066 aa18.69■□□□□ 0.58
RPP40-202ENST00000380051 CRY2Q49AN0 593 aa18.68■□□□□ 0.58
RPP40-202ENST00000380051 RAB11FIP3O75154 756 aa18.67■□□□□ 0.58
RPP40-202ENST00000380051 G3BP1Q13283 466 aaKnown RBP eCLIP18.67■□□□□ 0.58
RPP40-202ENST00000380051 TAF7LQ5H9L4 462 aa18.67■□□□□ 0.58
RPP40-202ENST00000380051 DDX46Q7L014 1031 aaKnown RBP18.67■□□□□ 0.58
RPP40-202ENST00000380051 CDC5LQ99459 802 aaKnown RBP18.67■□□□□ 0.58
RPP40-202ENST00000380051 SGIP1Q9BQI5 828 aa18.66■□□□□ 0.58
RPP40-202ENST00000380051 PA2G4Q9UQ80 394 aaKnown RBP18.66■□□□□ 0.58
RPP40-202ENST00000380051 CIAO1O76071 339 aa18.65■□□□□ 0.58
RPP40-202ENST00000380051 ERC1Q8IUD2 1116 aa18.65■□□□□ 0.58
RPP40-202ENST00000380051 KLHDC4Q8TBB5 520 aa18.65■□□□□ 0.58
RPP40-202ENST00000380051 RPGRQ92834 1020 aaKnown RBP18.65■□□□□ 0.58
RPP40-202ENST00000380051 RBM17Q96I25 401 aaKnown RBP18.65■□□□□ 0.58
RPP40-202ENST00000380051 SEC31BQ9NQW1 1179 aa18.65■□□□□ 0.58
RPP40-202ENST00000380051 EXOC6BQ9Y2D4 811 aa18.65■□□□□ 0.58
RPP40-202ENST00000380051 TNRC6CQ9HCJ0 1690 aaKnown RBP18.65■□□□□ 0.58
RPP40-202ENST00000380051 ANKRD31Q8N7Z5 1873 aa18.65■□□□□ 0.58
RPP40-202ENST00000380051 EYA2O00167 538 aa18.65■□□□□ 0.58
RPP40-202ENST00000380051 HOXA10P31260 410 aaPredicted RBP18.65■□□□□ 0.58
RPP40-202ENST00000380051 IGHMBP2P38935 993 aaKnown RBP18.65■□□□□ 0.58
RPP40-202ENST00000380051 ZNF594Q96JF6 807 aaPredicted RBP18.65■□□□□ 0.58
RPP40-202ENST00000380051 SPON1Q9HCB6 807 aa18.65■□□□□ 0.58
RPP40-202ENST00000380051 PTGER2P43116 358 aa18.64■□□□□ 0.57
RPP40-202ENST00000380051 OS9Q13438 667 aaPredicted RBP18.64■□□□□ 0.57
RPP40-202ENST00000380051 ANKRD18AQ8IVF6 992 aa18.64■□□□□ 0.57
RPP40-202ENST00000380051 CRAMP1Q96RY5 1269 aa18.64■□□□□ 0.57
RPP40-202ENST00000380051 C10orf71Q711Q0 1435 aa18.63■□□□□ 0.57
RPP40-202ENST00000380051 SRGNP10124 158 aa18.63■□□□□ 0.57
RPP40-202ENST00000380051 NPR1P16066 1061 aa18.63■□□□□ 0.57
RPP40-202ENST00000380051 IL15P40933 162 aaPredicted RBP18.63■□□□□ 0.57
RPP40-202ENST00000380051 RPS8P62241 208 aaKnown RBP18.63■□□□□ 0.57
RPP40-202ENST00000380051 LDHAL6AQ6ZMR3 332 aa18.63■□□□□ 0.57
RPP40-202ENST00000380051 KIF1BPQ96EK5 621 aa18.63■□□□□ 0.57
RPP40-202ENST00000380051 MPHOSPH8Q99549 860 aa18.63■□□□□ 0.57
RPP40-202ENST00000380051 SIL1Q9H173 461 aa18.63■□□□□ 0.57
RPP40-202ENST00000380051 H0YIN7 160 aa18.62■□□□□ 0.57
RPP40-202ENST00000380051 ALDH1B1P30837 517 aa18.62■□□□□ 0.57
RPP40-202ENST00000380051 GRAPQ13588 217 aa18.62■□□□□ 0.57
RPP40-202ENST00000380051 ANKRD45Q5TZF3 282 aa18.62■□□□□ 0.57
RPP40-202ENST00000380051 GRAPLQ8TC17 118 aaPredicted RBP18.62■□□□□ 0.57
RPP40-202ENST00000380051 MASTLQ96GX5 879 aa18.62■□□□□ 0.57
RPP40-202ENST00000380051 LRRCC1Q9C099 1032 aa18.62■□□□□ 0.57
RPP40-202ENST00000380051 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
RPP40-202ENST00000380051 NUCB1Q02818 461 aa18.61■□□□□ 0.57
RPP40-202ENST00000380051 ATG9AQ7Z3C6 839 aa18.61■□□□□ 0.57
RPP40-202ENST00000380051 C2CD5Q86YS7 1000 aa18.61■□□□□ 0.57
RPP40-202ENST00000380051 RHPN1Q8TCX5 695 aa18.61■□□□□ 0.57
RPP40-202ENST00000380051 CELF1Q92879 486 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms