RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 TTLL6Q8N841 843 aa15.03■□□□□ -0
PCNA-201ENST00000379143 ZNF622Q969S3 477 aaKnown RBP eCLIP15.03■□□□□ -0
PCNA-201ENST00000379143 HDAC5Q9UQL6 1122 aa15.03■□□□□ -0
PCNA-201ENST00000379143 CASP7P55210 303 aa15.02■□□□□ -0
PCNA-201ENST00000379143 SF3B3Q15393 1217 aaKnown RBP15.02■□□□□ -0
PCNA-201ENST00000379143 DALRD3Q5D0E6 543 aaKnown RBP15.02■□□□□ -0
PCNA-201ENST00000379143 CLUAP1Q96AJ1 413 aa15.02■□□□□ -0
PCNA-201ENST00000379143 RBM17Q96I25 401 aaKnown RBP15.02■□□□□ -0
PCNA-201ENST00000379143 PLA2G12BQ9BX93 195 aa15.02■□□□□ -0
PCNA-201ENST00000379143 UTYO14607 1347 aa15.02□□□□□ -0.01
PCNA-201ENST00000379143 CCDC152Q4G0S7 254 aa15.01□□□□□ -0.01
PCNA-201ENST00000379143 JARID2Q92833 1246 aaPredicted RBP15.01□□□□□ -0.01
PCNA-201ENST00000379143 CRAMP1Q96RY5 1269 aa15.01□□□□□ -0.01
PCNA-201ENST00000379143 MYH3P11055 1940 aa15□□□□□ -0.01
PCNA-201ENST00000379143 CTSWP56202 376 aa15□□□□□ -0.01
PCNA-201ENST00000379143 DDX46Q7L014 1031 aaKnown RBP15□□□□□ -0.01
PCNA-201ENST00000379143 USP44Q9H0E7 712 aa15□□□□□ -0.01
PCNA-201ENST00000379143 BCS1LQ9Y276 419 aa15□□□□□ -0.01
PCNA-201ENST00000379143 GNAI3P08754 354 aa14.99□□□□□ -0.01
PCNA-201ENST00000379143 NBPF7P0C2Y1 421 aaPredicted RBP14.99□□□□□ -0.01
PCNA-201ENST00000379143 C3orf67Q6ZVT6 689 aa14.99□□□□□ -0.01
PCNA-201ENST00000379143 ARFGEF1Q9Y6D6 1849 aa14.98□□□□□ -0.01
PCNA-201ENST00000379143 UBTFL1P0CB47 393 aaPredicted RBP14.98□□□□□ -0.01
PCNA-201ENST00000379143 PRPF40BQ6NWY9 871 aaKnown RBP14.98□□□□□ -0.01
PCNA-201ENST00000379143 TMEM57Q8N5G2 664 aa14.98□□□□□ -0.01
PCNA-201ENST00000379143 TTLL11Q8NHH1 800 aa14.98□□□□□ -0.01
PCNA-201ENST00000379143 TNNQ9UQP3 1299 aa14.98□□□□□ -0.01
PCNA-201ENST00000379143 RTL9Q8NET4 1388 aa14.98□□□□□ -0.01
PCNA-201ENST00000379143 BBOX1O75936 387 aa14.97□□□□□ -0.01
PCNA-201ENST00000379143 CSF1RP07333 972 aa14.97□□□□□ -0.01
PCNA-201ENST00000379143 GRAPQ13588 217 aa14.97□□□□□ -0.01
PCNA-201ENST00000379143 PDE3AQ14432 1141 aa14.97□□□□□ -0.01
PCNA-201ENST00000379143 SOGA3Q5TF21 947 aa14.97□□□□□ -0.01
PCNA-201ENST00000379143 TMC4Q7Z404 712 aa14.97□□□□□ -0.01
PCNA-201ENST00000379143 GRAPLQ8TC17 118 aaPredicted RBP14.97□□□□□ -0.01
PCNA-201ENST00000379143 CACNA1SQ13698 1873 aa14.96□□□□□ -0.01
PCNA-201ENST00000379143 FOXO4P98177 505 aa14.96□□□□□ -0.01
PCNA-201ENST00000379143 ITPRIPQ8IWB1 547 aa14.96□□□□□ -0.01
PCNA-201ENST00000379143 TMX4Q9H1E5 349 aaPredicted RBP14.96□□□□□ -0.01
PCNA-201ENST00000379143 GPBP1L1Q9HC44 474 aaPredicted RBP14.96□□□□□ -0.01
PCNA-201ENST00000379143 WWC3Q9ULE0 1092 aa14.96□□□□□ -0.01
PCNA-201ENST00000379143 PLIN1O60240 522 aa14.95□□□□□ -0.02
PCNA-201ENST00000379143 RLBP1P12271 317 aa14.95□□□□□ -0.02
PCNA-201ENST00000379143 GRIPAP1Q4V328 841 aa14.95□□□□□ -0.02
PCNA-201ENST00000379143 CC2D2BQ6DHV5 1058 aa14.95□□□□□ -0.02
PCNA-201ENST00000379143 SUCLG2Q96I99 432 aa14.95□□□□□ -0.02
PCNA-201ENST00000379143 CDC5LQ99459 802 aaKnown RBP14.95□□□□□ -0.02
PCNA-201ENST00000379143 CHMP4BQ9H444 224 aaKnown RBP14.95□□□□□ -0.02
PCNA-201ENST00000379143 SLX4Q8IY92 1834 aa14.94□□□□□ -0.02
PCNA-201ENST00000379143 PPEF1O14829 653 aaPredicted RBP14.94□□□□□ -0.02
PCNA-201ENST00000379143 C21orf2O43822 256 aa14.94□□□□□ -0.02
PCNA-201ENST00000379143 HSPA6P17066 643 aa14.94□□□□□ -0.02
PCNA-201ENST00000379143 RRP1P56182 461 aaKnown RBP14.94□□□□□ -0.02
PCNA-201ENST00000379143 LMBR1LQ6UX01 489 aa14.94□□□□□ -0.02
PCNA-201ENST00000379143 PANK1Q8TE04 598 aa14.94□□□□□ -0.02
PCNA-201ENST00000379143 MEIS3Q99687 375 aa14.94□□□□□ -0.02
PCNA-201ENST00000379143 GREM2Q9H772 168 aa14.94□□□□□ -0.02
PCNA-201ENST00000379143 ANKRD18BA2A2Z9 1011 aa14.93□□□□□ -0.02
PCNA-201ENST00000379143 ITGA6P23229 1130 aa14.93□□□□□ -0.02
PCNA-201ENST00000379143 RPS8P62241 208 aaKnown RBP14.93□□□□□ -0.02
PCNA-201ENST00000379143 IFIT5Q13325 482 aaKnown RBP14.93□□□□□ -0.02
PCNA-201ENST00000379143 MVPQ14764 893 aaKnown RBP14.93□□□□□ -0.02
PCNA-201ENST00000379143 CCDC57Q2TAC2 916 aa14.93□□□□□ -0.02
PCNA-201ENST00000379143 RABL6Q3YEC7 729 aaPredicted RBP14.93□□□□□ -0.02
PCNA-201ENST00000379143 ANKRD18AQ8IVF6 992 aa14.93□□□□□ -0.02
PCNA-201ENST00000379143 C7orf43Q8WVR3 580 aa14.93□□□□□ -0.02
PCNA-201ENST00000379143 KAZALD1Q96I82 304 aa14.93□□□□□ -0.02
PCNA-201ENST00000379143 CCDC85AQ96PX6 553 aaPredicted RBP14.93□□□□□ -0.02
PCNA-201ENST00000379143 BICC1Q9H694 974 aaKnown RBP14.93□□□□□ -0.02
PCNA-201ENST00000379143 DDX19BQ9UMR2 479 aa14.93□□□□□ -0.02
PCNA-201ENST00000379143 CHMP3Q9Y3E7 222 aa14.93□□□□□ -0.02
PCNA-201ENST00000379143 ZBTB7BO15156 539 aaPredicted RBP14.92□□□□□ -0.02
PCNA-201ENST00000379143 GNAI2P04899 355 aa14.92□□□□□ -0.02
PCNA-201ENST00000379143 FAM161AQ3B820 660 aa14.92□□□□□ -0.02
PCNA-201ENST00000379143 CCDC93Q567U6 631 aa14.92□□□□□ -0.02
PCNA-201ENST00000379143 EPHA10Q5JZY3 1008 aa14.92□□□□□ -0.02
PCNA-201ENST00000379143 SP8Q8IXZ3 490 aa14.92□□□□□ -0.02
PCNA-201ENST00000379143 RTKN2Q8IZC4 609 aa14.92□□□□□ -0.02
PCNA-201ENST00000379143 SEC31BQ9NQW1 1179 aa14.92□□□□□ -0.02
PCNA-201ENST00000379143 ATP6V0A2Q9Y487 856 aa14.92□□□□□ -0.02
PCNA-201ENST00000379143 IGHMBP2P38935 993 aaKnown RBP14.92□□□□□ -0.02
PCNA-201ENST00000379143 ZNF526Q8TF50 670 aaPredicted RBP14.92□□□□□ -0.02
PCNA-201ENST00000379143 CELF1Q92879 486 aaKnown RBP14.92□□□□□ -0.02
PCNA-201ENST00000379143 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
PCNA-201ENST00000379143 COG6Q9Y2V7 657 aa14.92□□□□□ -0.02
PCNA-201ENST00000379143 LRRFIP2Q9Y608 721 aaKnown RBP14.92□□□□□ -0.02
PCNA-201ENST00000379143 TAF1P21675 1872 aa14.91□□□□□ -0.02
PCNA-201ENST00000379143 TAF7LQ5H9L4 462 aa14.91□□□□□ -0.02
PCNA-201ENST00000379143 ARHGAP27Q6ZUM4 889 aa14.91□□□□□ -0.02
PCNA-201ENST00000379143 ANKRD44Q8N8A2 993 aa14.91□□□□□ -0.02
PCNA-201ENST00000379143 MPHOSPH8Q99549 860 aa14.91□□□□□ -0.02
PCNA-201ENST00000379143 BSDC1Q9NW68 430 aaPredicted RBP14.91□□□□□ -0.02
PCNA-201ENST00000379143 LRRC37AA6NMS7 1700 aa14.9□□□□□ -0.02
PCNA-201ENST00000379143 C20orf194Q5TEA3 1177 aa14.9□□□□□ -0.02
PCNA-201ENST00000379143 LTBP3Q9NS15 1303 aa14.89□□□□□ -0.03
PCNA-201ENST00000379143 FER1L6Q2WGJ9 1857 aa14.89□□□□□ -0.03
PCNA-201ENST00000379143 FKBP4Q02790 459 aaKnown RBP eCLIP14.88□□□□□ -0.03
PCNA-201ENST00000379143 MTX1Q13505 466 aa14.88□□□□□ -0.03
PCNA-201ENST00000379143 MPNDQ8N594 471 aa14.88□□□□□ -0.03
PCNA-201ENST00000379143 PSMD1Q99460 953 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms