RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 PRPF40AO75400 957 aaKnown RBP25.73■■□□□ 1.71
CNTFR-202ENST00000378980 TRIM28Q13263 835 aaKnown RBP25.73■■□□□ 1.71
CNTFR-202ENST00000378980 STARD3NLO95772 234 aa25.72■■□□□ 1.71
CNTFR-202ENST00000378980 KIF6Q6ZMV9 814 aa25.72■■□□□ 1.71
CNTFR-202ENST00000378980 CHAMP1Q96JM3 812 aa25.72■■□□□ 1.71
CNTFR-202ENST00000378980 PANK2Q9BZ23 570 aa25.72■■□□□ 1.71
CNTFR-202ENST00000378980 ZNF330Q9Y3S2 320 aaPredicted RBP25.72■■□□□ 1.71
CNTFR-202ENST00000378980 EYA2O00167 538 aa25.72■■□□□ 1.71
CNTFR-202ENST00000378980 DNAJC2Q99543 621 aaKnown RBP25.72■■□□□ 1.71
CNTFR-202ENST00000378980 WDR33Q9C0J8 1336 aaKnown RBP25.71■■□□□ 1.71
CNTFR-202ENST00000378980 ZNF609O15014 1411 aa25.71■■□□□ 1.71
CNTFR-202ENST00000378980 CIAO1O76071 339 aa25.71■■□□□ 1.71
CNTFR-202ENST00000378980 RNF20Q5VTR2 975 aa25.71■■□□□ 1.71
CNTFR-202ENST00000378980 LARP6Q9BRS8 491 aaKnown RBP25.71■■□□□ 1.71
CNTFR-202ENST00000378980 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.71■■□□□ 1.71
CNTFR-202ENST00000378980 NDUFB9Q9Y6M9 179 aa25.71■■□□□ 1.71
CNTFR-202ENST00000378980 TAF5LO75529 589 aa25.7■■□□□ 1.7
CNTFR-202ENST00000378980 LARGE1O95461 756 aa25.7■■□□□ 1.7
CNTFR-202ENST00000378980 KAT6BQ8WYB5 2073 aa25.7■■□□□ 1.7
CNTFR-202ENST00000378980 PSMA5P28066 241 aa25.69■■□□□ 1.7
CNTFR-202ENST00000378980 LRRC24Q50LG9 513 aa25.69■■□□□ 1.7
CNTFR-202ENST00000378980 ZNF594Q96JF6 807 aaPredicted RBP25.69■■□□□ 1.7
CNTFR-202ENST00000378980 ZSCAN31Q96LW9 406 aaPredicted RBP25.69■■□□□ 1.7
CNTFR-202ENST00000378980 GPT2Q8TD30 523 aa25.68■■□□□ 1.7
CNTFR-202ENST00000378980 SH2B1Q9NRF2 756 aaPredicted RBP25.68■■□□□ 1.7
CNTFR-202ENST00000378980 HMG20BQ9P0W2 317 aa25.68■■□□□ 1.7
CNTFR-202ENST00000378980 ANKRD36CQ5JPF3 1778 aa25.68■■□□□ 1.7
CNTFR-202ENST00000378980 PCCAP05165 728 aaPredicted RBP25.68■■□□□ 1.7
CNTFR-202ENST00000378980 CAVIN1Q6NZI2 390 aaKnown RBP25.68■■□□□ 1.7
CNTFR-202ENST00000378980 NEUROD6Q96NK8 337 aa25.68■■□□□ 1.7
CNTFR-202ENST00000378980 PALLDQ8WX93 1383 aa25.67■■□□□ 1.7
CNTFR-202ENST00000378980 MAP3K15Q6ZN16 1313 aa25.67■■□□□ 1.7
CNTFR-202ENST00000378980 NCLP19338 710 aaKnown RBP25.67■■□□□ 1.7
CNTFR-202ENST00000378980 USPL1Q5W0Q7 1092 aa25.67■■□□□ 1.7
CNTFR-202ENST00000378980 DDX46Q7L014 1031 aaKnown RBP25.67■■□□□ 1.7
CNTFR-202ENST00000378980 KBTBD3Q8NAB2 608 aa25.67■■□□□ 1.7
CNTFR-202ENST00000378980 SPEF2Q9C093 1822 aa25.67■■□□□ 1.7
CNTFR-202ENST00000378980 TSGA10IPQ3SY00 556 aa25.67■■□□□ 1.7
CNTFR-202ENST00000378980 PLA2G12BQ9BX93 195 aa25.67■■□□□ 1.7
CNTFR-202ENST00000378980 ZNF445P59923 1031 aa25.66■■□□□ 1.7
CNTFR-202ENST00000378980 TIMM10P62072 90 aa25.66■■□□□ 1.7
CNTFR-202ENST00000378980 SMC3Q9UQE7 1217 aa25.66■■□□□ 1.7
CNTFR-202ENST00000378980 DOT1LQ8TEK3 1739 aa25.66■■□□□ 1.7
CNTFR-202ENST00000378980 EXOC5O00471 708 aa25.65■■□□□ 1.7
CNTFR-202ENST00000378980 SLC4A9Q96Q91 983 aa25.65■■□□□ 1.7
CNTFR-202ENST00000378980 TCHHQ07283 1943 aa25.65■■□□□ 1.7
CNTFR-202ENST00000378980 CYP19A1P11511 503 aaPredicted RBP25.65■■□□□ 1.7
CNTFR-202ENST00000378980 GIGYF2Q6Y7W6 1299 aaKnown RBP25.65■■□□□ 1.7
CNTFR-202ENST00000378980 ZBTB38Q8NAP3 1195 aaPredicted RBP25.65■■□□□ 1.7
CNTFR-202ENST00000378980 PUS3Q9BZE2 481 aaKnown RBP25.65■■□□□ 1.7
CNTFR-202ENST00000378980 CCDC9Q9Y3X0 531 aaKnown RBP25.65■■□□□ 1.7
CNTFR-202ENST00000378980 SH3TC1Q8TE82 1336 aa25.64■■□□□ 1.7
CNTFR-202ENST00000378980 CCDC57Q2TAC2 916 aa25.64■■□□□ 1.7
CNTFR-202ENST00000378980 ZSCAN23Q3MJ62 389 aa25.64■■□□□ 1.7
CNTFR-202ENST00000378980 MCMDC2Q4G0Z9 681 aa25.64■■□□□ 1.7
CNTFR-202ENST00000378980 CCDC83Q8IWF9 413 aa25.64■■□□□ 1.7
CNTFR-202ENST00000378980 RTN4Q9NQC3 1192 aaKnown RBP25.64■■□□□ 1.7
CNTFR-202ENST00000378980 FBXO3Q9UK99 471 aa25.64■■□□□ 1.7
CNTFR-202ENST00000378980 TAF6LQ9Y6J9 622 aa25.64■■□□□ 1.7
CNTFR-202ENST00000378980 A0A1B0GUL7 405 aa25.64■■□□□ 1.69
CNTFR-202ENST00000378980 CHGBP05060 677 aa25.64■■□□□ 1.69
CNTFR-202ENST00000378980 BLOC1S2Q6QNY1 142 aa25.64■■□□□ 1.69
CNTFR-202ENST00000378980 TICAM2Q86XR7 235 aa25.64■■□□□ 1.69
CNTFR-202ENST00000378980 FAM89AQ96GI7 184 aa25.64■■□□□ 1.69
CNTFR-202ENST00000378980 PAG1Q9NWQ8 432 aa25.64■■□□□ 1.69
CNTFR-202ENST00000378980 ME3Q16798 604 aa25.63■■□□□ 1.69
CNTFR-202ENST00000378980 ALDH8A1Q9H2A2 487 aaPredicted RBP25.63■■□□□ 1.69
CNTFR-202ENST00000378980 MBD3O95983 291 aa25.62■■□□□ 1.69
CNTFR-202ENST00000378980 RPS6KB1P23443 525 aa25.62■■□□□ 1.69
CNTFR-202ENST00000378980 ST3GAL1Q11201 340 aa25.62■■□□□ 1.69
CNTFR-202ENST00000378980 COL9A3Q14050 684 aaPredicted RBP25.62■■□□□ 1.69
CNTFR-202ENST00000378980 SEC62Q99442 399 aaKnown RBP25.62■■□□□ 1.69
CNTFR-202ENST00000378980 NRAPQ86VF7 1730 aa25.62■■□□□ 1.69
CNTFR-202ENST00000378980 NUP98P52948 1817 aa25.62■■□□□ 1.69
CNTFR-202ENST00000378980 MYH3P11055 1940 aa25.62■■□□□ 1.69
CNTFR-202ENST00000378980 GOLIM4O00461 696 aa25.62■■□□□ 1.69
CNTFR-202ENST00000378980 STX6O43752 255 aa25.62■■□□□ 1.69
CNTFR-202ENST00000378980 CSF1RP07333 972 aa25.62■■□□□ 1.69
CNTFR-202ENST00000378980 ZSCAN22P10073 491 aaPredicted RBP25.62■■□□□ 1.69
CNTFR-202ENST00000378980 SYT1P21579 422 aa25.62■■□□□ 1.69
CNTFR-202ENST00000378980 CEP126Q9P2H0 1117 aa25.62■■□□□ 1.69
CNTFR-202ENST00000378980 TPCN1Q9ULQ1 816 aa25.62■■□□□ 1.69
CNTFR-202ENST00000378980 CDHR2Q9BYE9 1310 aa25.61■■□□□ 1.69
CNTFR-202ENST00000378980 HLFQ16534 295 aa25.61■■□□□ 1.69
CNTFR-202ENST00000378980 CCDC129Q6ZRS4 1044 aa25.61■■□□□ 1.69
CNTFR-202ENST00000378980 U3KPZ7 1027 aaPredicted RBP25.61■■□□□ 1.69
CNTFR-202ENST00000378980 KRT32Q14532 448 aa25.6■■□□□ 1.69
CNTFR-202ENST00000378980 ANKRD1Q15327 319 aa25.6■■□□□ 1.69
CNTFR-202ENST00000378980 HSP90AB3PQ58FF7 597 aa25.6■■□□□ 1.69
CNTFR-202ENST00000378980 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.6■■□□□ 1.69
CNTFR-202ENST00000378980 GJB2P29033 226 aa25.6■■□□□ 1.69
CNTFR-202ENST00000378980 NSFL1CQ9UNZ2 370 aaKnown RBP25.6■■□□□ 1.69
CNTFR-202ENST00000378980 NLRP10Q86W26 655 aa25.59■■□□□ 1.69
CNTFR-202ENST00000378980 SYTL4Q96C24 671 aaPredicted RBP25.59■■□□□ 1.69
CNTFR-202ENST00000378980 RBM27Q9P2N5 1060 aaKnown RBP25.59■■□□□ 1.69
CNTFR-202ENST00000378980 ZBTB1Q9Y2K1 713 aa25.59■■□□□ 1.69
CNTFR-202ENST00000378980 IFIT1P09914 478 aaKnown RBP25.59■■□□□ 1.69
CNTFR-202ENST00000378980 HELLSQ9NRZ9 838 aa25.59■■□□□ 1.69
CNTFR-202ENST00000378980 PHLPP1O60346 1717 aa25.57■■□□□ 1.68
CNTFR-202ENST00000378980 IFIT5Q13325 482 aaKnown RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms