RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 PASKQ96RG2 1323 aa24.41■■□□□ 1.5
TMEM88B-201ENST00000378821 EPHX2P34913 555 aa24.41■■□□□ 1.5
TMEM88B-201ENST00000378821 EIF6P56537 245 aaKnown RBP24.41■■□□□ 1.5
TMEM88B-201ENST00000378821 GOLGA2Q08379 1002 aa24.41■■□□□ 1.5
TMEM88B-201ENST00000378821 RIC3Q7Z5B4 369 aa24.41■■□□□ 1.5
TMEM88B-201ENST00000378821 PNMA8AQ86V59 439 aaPredicted RBP24.4■■□□□ 1.5
TMEM88B-201ENST00000378821 ZBTB38Q8NAP3 1195 aaPredicted RBP24.4■■□□□ 1.5
TMEM88B-201ENST00000378821 LTBP1Q14766 1721 aa24.4■■□□□ 1.5
TMEM88B-201ENST00000378821 CCER2I3L3R5 266 aa24.39■■□□□ 1.49
TMEM88B-201ENST00000378821 PPIP5K2O43314 1243 aa24.39■■□□□ 1.49
TMEM88B-201ENST00000378821 ITGBL1O95965 494 aaPredicted RBP24.39■■□□□ 1.49
TMEM88B-201ENST00000378821 MPNDQ8N594 471 aa24.39■■□□□ 1.49
TMEM88B-201ENST00000378821 CCDC191Q8NCU4 936 aa24.39■■□□□ 1.49
TMEM88B-201ENST00000378821 DUOX1Q9NRD9 1551 aa24.38■■□□□ 1.49
TMEM88B-201ENST00000378821 AOC3Q16853 763 aa24.38■■□□□ 1.49
TMEM88B-201ENST00000378821 DPP8Q6V1X1 898 aaPredicted RBP24.38■■□□□ 1.49
TMEM88B-201ENST00000378821 NIM1KQ8IY84 436 aa24.38■■□□□ 1.49
TMEM88B-201ENST00000378821 TSR2Q969E8 191 aaKnown RBP24.38■■□□□ 1.49
TMEM88B-201ENST00000378821 CREBZFQ9NS37 354 aa24.38■■□□□ 1.49
TMEM88B-201ENST00000378821 IRS4O14654 1257 aaPredicted RBP24.37■■□□□ 1.49
TMEM88B-201ENST00000378821 SCNN1DP51172 638 aa24.37■■□□□ 1.49
TMEM88B-201ENST00000378821 KIAA2012Q0VF49 1180 aa24.37■■□□□ 1.49
TMEM88B-201ENST00000378821 ZNF428Q96B54 188 aa24.37■■□□□ 1.49
TMEM88B-201ENST00000378821 METTL22Q9BUU2 404 aaPredicted RBP24.37■■□□□ 1.49
TMEM88B-201ENST00000378821 ZNRF3Q9ULT6 936 aa24.37■■□□□ 1.49
TMEM88B-201ENST00000378821 COL4A1P02462 1669 aa24.37■■□□□ 1.49
TMEM88B-201ENST00000378821 DDX58O95786 925 aaKnown RBP24.35■■□□□ 1.49
TMEM88B-201ENST00000378821 PCCAP05165 728 aaPredicted RBP24.35■■□□□ 1.49
TMEM88B-201ENST00000378821 HSP90B1P14625 803 aaKnown RBP24.35■■□□□ 1.49
TMEM88B-201ENST00000378821 CELF1Q92879 486 aaKnown RBP24.35■■□□□ 1.49
TMEM88B-201ENST00000378821 MYD88Q99836 296 aa24.35■■□□□ 1.49
TMEM88B-201ENST00000378821 SALL2Q9Y467 1007 aaPredicted RBP24.35■■□□□ 1.49
TMEM88B-201ENST00000378821 GJA3Q9Y6H8 435 aa24.35■■□□□ 1.49
TMEM88B-201ENST00000378821 CXCL9Q07325 125 aa24.34■■□□□ 1.49
TMEM88B-201ENST00000378821 TWISTNBQ3B726 338 aaPredicted RBP24.33■■□□□ 1.49
TMEM88B-201ENST00000378821 EAPPQ56P03 285 aaPredicted RBP24.33■■□□□ 1.49
TMEM88B-201ENST00000378821 RTL5Q5HYW3 569 aaPredicted RBP24.33■■□□□ 1.49
TMEM88B-201ENST00000378821 KSR2Q6VAB6 950 aa24.33■■□□□ 1.49
TMEM88B-201ENST00000378821 WDR63Q8IWG1 891 aa24.33■■□□□ 1.49
TMEM88B-201ENST00000378821 CWC25Q9NXE8 425 aaPredicted RBP24.33■■□□□ 1.49
TMEM88B-201ENST00000378821 MIER1Q8N108 512 aa24.32■■□□□ 1.48
TMEM88B-201ENST00000378821 CACNA1FO60840 1977 aa24.32■■□□□ 1.48
TMEM88B-201ENST00000378821 LMOD1P29536 600 aaPredicted RBP24.31■■□□□ 1.48
TMEM88B-201ENST00000378821 EPS15P42566 896 aa24.31■■□□□ 1.48
TMEM88B-201ENST00000378821 RPS8P62241 208 aaKnown RBP24.31■■□□□ 1.48
TMEM88B-201ENST00000378821 MAP3K2Q9Y2U5 619 aa24.31■■□□□ 1.48
TMEM88B-201ENST00000378821 PI4KAP2A4QPH2 592 aa24.3■■□□□ 1.48
TMEM88B-201ENST00000378821 IGKV5-2P06315 115 aa24.3■■□□□ 1.48
TMEM88B-201ENST00000378821 USP50Q70EL3 339 aaPredicted RBP24.3■■□□□ 1.48
TMEM88B-201ENST00000378821 CNTROBQ8N137 903 aa24.3■■□□□ 1.48
TMEM88B-201ENST00000378821 PI4KAP1Q8N8J0 262 aa24.3■■□□□ 1.48
TMEM88B-201ENST00000378821 STK31Q9BXU1 1019 aa24.3■■□□□ 1.48
TMEM88B-201ENST00000378821 GPRC5DQ9NZD1 345 aa24.3■■□□□ 1.48
TMEM88B-201ENST00000378821 PCNTO95613 3336 aa24.3■■□□□ 1.48
TMEM88B-201ENST00000378821 CDHR2Q9BYE9 1310 aa24.3■■□□□ 1.48
TMEM88B-201ENST00000378821 PDE8AO60658 829 aa24.29■■□□□ 1.48
TMEM88B-201ENST00000378821 IFFO2Q5TF58 517 aa24.29■■□□□ 1.48
TMEM88B-201ENST00000378821 CLEC11AQ9Y240 323 aa24.29■■□□□ 1.48
TMEM88B-201ENST00000378821 FANCIQ9NVI1 1328 aa24.29■■□□□ 1.48
TMEM88B-201ENST00000378821 YDJCA8MPS7 323 aa24.28■■□□□ 1.48
TMEM88B-201ENST00000378821 MAP1SQ66K74 1059 aaPredicted RBP24.28■■□□□ 1.48
TMEM88B-201ENST00000378821 PODXL2Q9NZ53 605 aa24.28■■□□□ 1.48
TMEM88B-201ENST00000378821 POLLQ9UGP5 575 aa24.28■■□□□ 1.48
TMEM88B-201ENST00000378821 TMEM88BA6NKF7 163 aa24.27■■□□□ 1.48
TMEM88B-201ENST00000378821 SLC4A2P04920 1241 aa24.27■■□□□ 1.48
TMEM88B-201ENST00000378821 GPSM2P81274 684 aa24.27■■□□□ 1.48
TMEM88B-201ENST00000378821 WASHC4Q2M389 1173 aa24.27■■□□□ 1.48
TMEM88B-201ENST00000378821 CIAPIN1Q6FI81 312 aa24.27■■□□□ 1.48
TMEM88B-201ENST00000378821 G2E3Q7L622 706 aa24.27■■□□□ 1.48
TMEM88B-201ENST00000378821 NSFL1CQ9UNZ2 370 aaKnown RBP24.27■■□□□ 1.48
TMEM88B-201ENST00000378821 VAMP4O75379 141 aa24.26■■□□□ 1.47
TMEM88B-201ENST00000378821 TNIP1Q15025 636 aa24.26■■□□□ 1.47
TMEM88B-201ENST00000378821 CCDC152Q4G0S7 254 aa24.26■■□□□ 1.47
TMEM88B-201ENST00000378821 SEC31BQ9NQW1 1179 aa24.26■■□□□ 1.47
TMEM88B-201ENST00000378821 ADARB2Q9NS39 739 aaKnown RBP24.26■■□□□ 1.47
TMEM88B-201ENST00000378821 CNTNAP1P78357 1384 aa24.26■■□□□ 1.47
TMEM88B-201ENST00000378821 MYH3P11055 1940 aa24.24■■□□□ 1.47
TMEM88B-201ENST00000378821 NEURL1BA8MQ27 555 aa24.24■■□□□ 1.47
TMEM88B-201ENST00000378821 GMPSP49915 693 aaPredicted RBP24.24■■□□□ 1.47
TMEM88B-201ENST00000378821 TBC1D16Q8TBP0 767 aa24.24■■□□□ 1.47
TMEM88B-201ENST00000378821 PGAP2Q9UHJ9 254 aa24.24■■□□□ 1.47
TMEM88B-201ENST00000378821 RAD17O75943 681 aa24.23■■□□□ 1.47
TMEM88B-201ENST00000378821 NEXNQ0ZGT2 675 aa24.23■■□□□ 1.47
TMEM88B-201ENST00000378821 JARID2Q92833 1246 aaPredicted RBP24.23■■□□□ 1.47
TMEM88B-201ENST00000378821 RTL9Q8NET4 1388 aa24.22■■□□□ 1.47
TMEM88B-201ENST00000378821 ZNF521Q96K83 1311 aa24.22■■□□□ 1.47
TMEM88B-201ENST00000378821 H7C1W4 665 aa24.22■■□□□ 1.47
TMEM88B-201ENST00000378821 FLIIQ13045 1269 aa24.22■■□□□ 1.47
TMEM88B-201ENST00000378821 EYA3Q99504 573 aa24.22■■□□□ 1.47
TMEM88B-201ENST00000378821 C6orf229H3BNL8 230 aa24.21■■□□□ 1.47
TMEM88B-201ENST00000378821 CTSWP56202 376 aa24.21■■□□□ 1.47
TMEM88B-201ENST00000378821 CWF19L2Q2TBE0 894 aaKnown RBP24.21■■□□□ 1.47
TMEM88B-201ENST00000378821 TTLL11Q8NHH1 800 aa24.21■■□□□ 1.47
TMEM88B-201ENST00000378821 SPINK5Q9NQ38 1064 aaPredicted RBP24.21■■□□□ 1.47
TMEM88B-201ENST00000378821 MKRN1Q9UHC7 482 aaKnown RBP24.21■■□□□ 1.47
TMEM88B-201ENST00000378821 EXOSC9Q06265 439 aaKnown RBP24.2■■□□□ 1.46
TMEM88B-201ENST00000378821 DPF2Q92785 391 aa24.2■■□□□ 1.46
TMEM88B-201ENST00000378821 TRPM7Q96QT4 1865 aa24.19■■□□□ 1.46
TMEM88B-201ENST00000378821 RASSF10A6NK89 507 aa24.19■■□□□ 1.46
TMEM88B-201ENST00000378821 ZC3H15Q8WU90 426 aaKnown RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms