RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 PDE8AO60658 829 aa21.16■□□□□ 0.98
THUMPD2-201ENST00000378727 SMIM5Q71RC9 77 aa21.16■□□□□ 0.98
THUMPD2-201ENST00000378727 GREM2Q9H772 168 aa21.16■□□□□ 0.98
THUMPD2-201ENST00000378727 IFIT5Q13325 482 aaKnown RBP21.15■□□□□ 0.98
THUMPD2-201ENST00000378727 PARP10Q53GL7 1025 aa21.15■□□□□ 0.98
THUMPD2-201ENST00000378727 DBNDD2Q9BQY9 259 aa21.15■□□□□ 0.98
THUMPD2-201ENST00000378727 NIP7Q9Y221 180 aaKnown RBP eCLIP21.15■□□□□ 0.98
THUMPD2-201ENST00000378727 SCN7AQ01118 1682 aa21.15■□□□□ 0.98
THUMPD2-201ENST00000378727 UTP14AQ9BVJ6 771 aaKnown RBP21.14■□□□□ 0.98
THUMPD2-201ENST00000378727 BCL11BQ9C0K0 894 aaPredicted RBP21.14■□□□□ 0.98
THUMPD2-201ENST00000378727 GPR108Q9NPR9 543 aa21.14■□□□□ 0.98
THUMPD2-201ENST00000378727 SH3TC1Q8TE82 1336 aa21.14■□□□□ 0.97
THUMPD2-201ENST00000378727 RPS6KA4O75676 772 aa21.14■□□□□ 0.97
THUMPD2-201ENST00000378727 CLEC4GQ6UXB4 293 aa21.14■□□□□ 0.97
THUMPD2-201ENST00000378727 BOLA2Q9H3K6 86 aa21.14■□□□□ 0.97
THUMPD2-201ENST00000378727 FBXO3Q9UK99 471 aa21.14■□□□□ 0.97
THUMPD2-201ENST00000378727 DDX60Q8IY21 1712 aaKnown RBP21.14■□□□□ 0.97
THUMPD2-201ENST00000378727 FAM177BA6PVY3 158 aa21.13■□□□□ 0.97
THUMPD2-201ENST00000378727 ITGA6P23229 1130 aa21.13■□□□□ 0.97
THUMPD2-201ENST00000378727 EVI5LQ96CN4 794 aa21.13■□□□□ 0.97
THUMPD2-201ENST00000378727 ZNF652Q9Y2D9 606 aa21.13■□□□□ 0.97
THUMPD2-201ENST00000378727 ZNF609O15014 1411 aa21.13■□□□□ 0.97
THUMPD2-201ENST00000378727 NTSR2O95665 410 aa21.13■□□□□ 0.97
THUMPD2-201ENST00000378727 ATP5JP18859 108 aa21.13■□□□□ 0.97
THUMPD2-201ENST00000378727 AK7Q96M32 723 aa21.12■□□□□ 0.97
THUMPD2-201ENST00000378727 LAMB2P55268 1798 aa21.12■□□□□ 0.97
THUMPD2-201ENST00000378727 HCLS1P14317 486 aaPredicted RBP21.11■□□□□ 0.97
THUMPD2-201ENST00000378727 KRT27Q7Z3Y8 459 aa21.11■□□□□ 0.97
THUMPD2-201ENST00000378727 AMIGO3Q86WK7 504 aa21.11■□□□□ 0.97
THUMPD2-201ENST00000378727 C4BP0C0L5 1744 aa21.11■□□□□ 0.97
THUMPD2-201ENST00000378727 GNPATO15228 680 aa21.11■□□□□ 0.97
THUMPD2-201ENST00000378727 TIMM10P62072 90 aa21.11■□□□□ 0.97
THUMPD2-201ENST00000378727 TAF7LQ5H9L4 462 aa21.11■□□□□ 0.97
THUMPD2-201ENST00000378727 BCL2L12Q9HB09 334 aa21.11■□□□□ 0.97
THUMPD2-201ENST00000378727 EP400Q96L91 3159 aa21.1■□□□□ 0.97
THUMPD2-201ENST00000378727 ANKRD18BA2A2Z9 1011 aa21.1■□□□□ 0.97
THUMPD2-201ENST00000378727 SGSM2O43147 1006 aa21.1■□□□□ 0.97
THUMPD2-201ENST00000378727 RIC1Q4ADV7 1423 aa21.1■□□□□ 0.97
THUMPD2-201ENST00000378727 RGL2O15211 777 aa21.09■□□□□ 0.97
THUMPD2-201ENST00000378727 FAM196AQ6ZSG2 479 aa21.09■□□□□ 0.97
THUMPD2-201ENST00000378727 SNX21Q969T3 373 aa21.09■□□□□ 0.97
THUMPD2-201ENST00000378727 NEUROD6Q96NK8 337 aa21.09■□□□□ 0.97
THUMPD2-201ENST00000378727 ANO2Q9NQ90 1003 aa21.09■□□□□ 0.97
THUMPD2-201ENST00000378727 CEP126Q9P2H0 1117 aa21.09■□□□□ 0.97
THUMPD2-201ENST00000378727 NARFQ9UHQ1 456 aa21.09■□□□□ 0.97
THUMPD2-201ENST00000378727 RIPOR2Q9Y4F9 1068 aa21.09■□□□□ 0.97
THUMPD2-201ENST00000378727 LRRC4BQ9NT99 713 aa21.09■□□□□ 0.97
THUMPD2-201ENST00000378727 LRP5O75197 1615 aa21.08■□□□□ 0.97
THUMPD2-201ENST00000378727 A0A1B0GUL7 405 aa21.08■□□□□ 0.97
THUMPD2-201ENST00000378727 CWC27Q6UX04 472 aaKnown RBP21.08■□□□□ 0.97
THUMPD2-201ENST00000378727 USPL1Q5W0Q7 1092 aa21.08■□□□□ 0.96
THUMPD2-201ENST00000378727 EDC3Q96F86 508 aaKnown RBP21.08■□□□□ 0.96
THUMPD2-201ENST00000378727 SRP68Q9UHB9 627 aaKnown RBP21.08■□□□□ 0.96
THUMPD2-201ENST00000378727 RTCBQ9Y3I0 505 aaKnown RBP21.08■□□□□ 0.96
THUMPD2-201ENST00000378727 CD2BP2O95400 341 aaKnown RBP21.07■□□□□ 0.96
THUMPD2-201ENST00000378727 LDHAL6AQ6ZMR3 332 aa21.07■□□□□ 0.96
THUMPD2-201ENST00000378727 DIAPH3Q9NSV4 1193 aa21.07■□□□□ 0.96
THUMPD2-201ENST00000378727 C4AP0C0L4 1744 aa21.07■□□□□ 0.96
THUMPD2-201ENST00000378727 TBC1D9BQ66K14 1250 aa21.06■□□□□ 0.96
THUMPD2-201ENST00000378727 HAUS7Q99871 368 aa21.06■□□□□ 0.96
THUMPD2-201ENST00000378727 RBM6P78332 1123 aaKnown RBP21.06■□□□□ 0.96
THUMPD2-201ENST00000378727 ZNF772Q68DY9 489 aaPredicted RBP21.06■□□□□ 0.96
THUMPD2-201ENST00000378727 HSCBQ8IWL3 235 aa21.06■□□□□ 0.96
THUMPD2-201ENST00000378727 NDUFB9Q9Y6M9 179 aa21.06■□□□□ 0.96
THUMPD2-201ENST00000378727 RABEP1Q15276 862 aa21.05■□□□□ 0.96
THUMPD2-201ENST00000378727 ARHGEF1Q92888 912 aaKnown RBP21.05■□□□□ 0.96
THUMPD2-201ENST00000378727 ANP32EQ9BTT0 268 aa21.05■□□□□ 0.96
THUMPD2-201ENST00000378727 EPB41L2O43491 1005 aaKnown RBP21.05■□□□□ 0.96
THUMPD2-201ENST00000378727 TRIM37O94972 964 aa21.05■□□□□ 0.96
THUMPD2-201ENST00000378727 FSD1Q9BTV5 496 aa21.05■□□□□ 0.96
THUMPD2-201ENST00000378727 LSG1Q9H089 658 aaKnown RBP21.05■□□□□ 0.96
THUMPD2-201ENST00000378727 AKAP2Q9Y2D5 859 aa21.05■□□□□ 0.96
THUMPD2-201ENST00000378727 COL24A1Q17RW2 1714 aa21.04■□□□□ 0.96
THUMPD2-201ENST00000378727 BICDL1Q6ZP65 573 aa21.04■□□□□ 0.96
THUMPD2-201ENST00000378727 VGLL2Q8N8G2 317 aa21.04■□□□□ 0.96
THUMPD2-201ENST00000378727 RUFY2Q8WXA3 655 aa21.04■□□□□ 0.96
THUMPD2-201ENST00000378727 CNNM1Q9NRU3 951 aa21.04■□□□□ 0.96
THUMPD2-201ENST00000378727 PALD1Q9ULE6 856 aa21.04■□□□□ 0.96
THUMPD2-201ENST00000378727 CASZ1Q86V15 1759 aa21.04■□□□□ 0.96
THUMPD2-201ENST00000378727 ADORA1P30542 326 aa21.03■□□□□ 0.96
THUMPD2-201ENST00000378727 ERFEQ4G0M1 354 aa21.03■□□□□ 0.96
THUMPD2-201ENST00000378727 METTL24Q5JXM2 366 aa21.03■□□□□ 0.96
THUMPD2-201ENST00000378727 FAM227BQ96M60 508 aa21.03■□□□□ 0.96
THUMPD2-201ENST00000378727 DNAJC2Q99543 621 aaKnown RBP21.03■□□□□ 0.96
THUMPD2-201ENST00000378727 SEC31BQ9NQW1 1179 aa21.03■□□□□ 0.96
THUMPD2-201ENST00000378727 RTL9Q8NET4 1388 aa21.03■□□□□ 0.96
THUMPD2-201ENST00000378727 HIP1O00291 1037 aa21.03■□□□□ 0.96
THUMPD2-201ENST00000378727 ZPR1O75312 459 aa21.03■□□□□ 0.96
THUMPD2-201ENST00000378727 NMIQ13287 307 aaPredicted RBP21.03■□□□□ 0.96
THUMPD2-201ENST00000378727 RAD50Q92878 1312 aa21.03■□□□□ 0.96
THUMPD2-201ENST00000378727 HSP90B1P14625 803 aaKnown RBP21.02■□□□□ 0.96
THUMPD2-201ENST00000378727 XAGE2Q96GT9 111 aa21.02■□□□□ 0.96
THUMPD2-201ENST00000378727 CCDC152Q4G0S7 254 aa21.01■□□□□ 0.95
THUMPD2-201ENST00000378727 UBR3Q6ZT12 1888 aa21.01■□□□□ 0.95
THUMPD2-201ENST00000378727 COL4A1P02462 1669 aa21.01■□□□□ 0.95
THUMPD2-201ENST00000378727 SPEF2Q9C093 1822 aa21.01■□□□□ 0.95
THUMPD2-201ENST00000378727 HSPA4P34932 840 aa21.01■□□□□ 0.95
THUMPD2-201ENST00000378727 IL17RAQ96F46 866 aa21.01■□□□□ 0.95
THUMPD2-201ENST00000378727 ANTXR1Q9H6X2 564 aa21.01■□□□□ 0.95
THUMPD2-201ENST00000378727 A0A0D9SFI3 127 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms