RNA–Protein interactions for RNA: ENST00000378601.7

DDB2-203, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 1,591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-203ENST00000378601 TFCP2Q12800 502 aa18.08■□□□□ 0.48
DDB2-203ENST00000378601 ADCK5Q3MIX3 580 aa18.08■□□□□ 0.48
DDB2-203ENST00000378601 USP48Q86UV5 1035 aa18.08■□□□□ 0.48
DDB2-203ENST00000378601 TSPY26PQ9H489 355 aa18.08■□□□□ 0.48
DDB2-203ENST00000378601 RBM27Q9P2N5 1060 aaKnown RBP18.08■□□□□ 0.48
DDB2-203ENST00000378601 NUP188Q5SRE5 1749 aa18.07■□□□□ 0.48
DDB2-203ENST00000378601 TAF5LO75529 589 aa18.07■□□□□ 0.48
DDB2-203ENST00000378601 CIAO1O76071 339 aa18.07■□□□□ 0.48
DDB2-203ENST00000378601 RPS6KB1P23443 525 aa18.07■□□□□ 0.48
DDB2-203ENST00000378601 IL15P40933 162 aaPredicted RBP18.07■□□□□ 0.48
DDB2-203ENST00000378601 UVSSAQ2YD98 709 aa18.07■□□□□ 0.48
DDB2-203ENST00000378601 CCDC183Q5T5S1 534 aa18.07■□□□□ 0.48
DDB2-203ENST00000378601 FOXD4L5Q5VV16 416 aaPredicted RBP18.07■□□□□ 0.48
DDB2-203ENST00000378601 TOM1L2Q6ZVM7 507 aa18.07■□□□□ 0.48
DDB2-203ENST00000378601 ZSCAN30Q86W11 494 aa18.07■□□□□ 0.48
DDB2-203ENST00000378601 FOXD4L4Q8WXT5 416 aaPredicted RBP18.07■□□□□ 0.48
DDB2-203ENST00000378601 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.07■□□□□ 0.48
DDB2-203ENST00000378601 PALLDQ8WX93 1383 aa18.07■□□□□ 0.48
DDB2-203ENST00000378601 SH3TC1Q8TE82 1336 aa18.06■□□□□ 0.48
DDB2-203ENST00000378601 SYCE3A1L190 88 aa18.06■□□□□ 0.48
DDB2-203ENST00000378601 GJB2P29033 226 aa18.06■□□□□ 0.48
DDB2-203ENST00000378601 FOXO4P98177 505 aa18.06■□□□□ 0.48
DDB2-203ENST00000378601 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.06■□□□□ 0.48
DDB2-203ENST00000378601 TEX13AQ9BXU3 409 aaPredicted RBP18.06■□□□□ 0.48
DDB2-203ENST00000378601 XIRP1Q702N8 1843 aaKnown RBP18.06■□□□□ 0.48
DDB2-203ENST00000378601 NBPF26B4DH59 902 aa18.05■□□□□ 0.48
DDB2-203ENST00000378601 MCM5P33992 734 aa18.05■□□□□ 0.48
DDB2-203ENST00000378601 NBPF14Q5TI25 921 aa18.05■□□□□ 0.48
DDB2-203ENST00000378601 NBPF10Q6P3W6 841 aaKnown RBP18.05■□□□□ 0.48
DDB2-203ENST00000378601 CCDC83Q8IWF9 413 aa18.05■□□□□ 0.48
DDB2-203ENST00000378601 NBPF15Q8N660 670 aa18.05■□□□□ 0.48
DDB2-203ENST00000378601 KLHDC4Q8TBB5 520 aa18.05■□□□□ 0.48
DDB2-203ENST00000378601 CHMP4CQ96CF2 233 aa18.05■□□□□ 0.48
DDB2-203ENST00000378601 MTMR6Q9Y217 621 aa18.05■□□□□ 0.48
DDB2-203ENST00000378601 HMGB1P09429 215 aaKnown RBP18.04■□□□□ 0.48
DDB2-203ENST00000378601 TRIM28Q13263 835 aaKnown RBP18.04■□□□□ 0.48
DDB2-203ENST00000378601 ME3Q16798 604 aa18.04■□□□□ 0.48
DDB2-203ENST00000378601 MCMDC2Q4G0Z9 681 aa18.04■□□□□ 0.48
DDB2-203ENST00000378601 LMBR1LQ6UX01 489 aa18.04■□□□□ 0.48
DDB2-203ENST00000378601 VSIG10Q8N0Z9 540 aa18.04■□□□□ 0.48
DDB2-203ENST00000378601 KBTBD3Q8NAB2 608 aa18.04■□□□□ 0.48
DDB2-203ENST00000378601 HELLSQ9NRZ9 838 aa18.04■□□□□ 0.48
DDB2-203ENST00000378601 NSFL1CQ9UNZ2 370 aaKnown RBP18.04■□□□□ 0.48
DDB2-203ENST00000378601 SPEF2Q9C093 1822 aa18.04■□□□□ 0.48
DDB2-203ENST00000378601 LRRFIP1Q32MZ4 808 aaKnown RBP18.04■□□□□ 0.48
DDB2-203ENST00000378601 ATP5J2-PTCD1G3V325 749 aa18.03■□□□□ 0.48
DDB2-203ENST00000378601 PTCD1O75127 700 aaKnown RBP18.03■□□□□ 0.48
DDB2-203ENST00000378601 LARGE1O95461 756 aa18.03■□□□□ 0.48
DDB2-203ENST00000378601 SLAIN2Q9P270 581 aa18.02■□□□□ 0.48
DDB2-203ENST00000378601 TPCN1Q9ULQ1 816 aa18.02■□□□□ 0.48
DDB2-203ENST00000378601 ELP1O95163 1332 aa18.02■□□□□ 0.47
DDB2-203ENST00000378601 ABCA3Q99758 1704 aa18.02■□□□□ 0.47
DDB2-203ENST00000378601 LTBP4Q8N2S1 1624 aa18.01■□□□□ 0.47
DDB2-203ENST00000378601 EYA2O00167 538 aa18.01■□□□□ 0.47
DDB2-203ENST00000378601 CPA1P15085 419 aa18.01■□□□□ 0.47
DDB2-203ENST00000378601 ATG9AQ7Z3C6 839 aa18.01■□□□□ 0.47
DDB2-203ENST00000378601 DBNDD2Q9BQY9 259 aa18.01■□□□□ 0.47
DDB2-203ENST00000378601 ISCA1Q9BUE6 129 aa18.01■□□□□ 0.47
DDB2-203ENST00000378601 DSCC1Q9BVC3 393 aa18.01■□□□□ 0.47
DDB2-203ENST00000378601 PLA2G12BQ9BX93 195 aa18.01■□□□□ 0.47
DDB2-203ENST00000378601 TJP1Q07157 1748 aa18.01■□□□□ 0.47
DDB2-203ENST00000378601 ABCC12Q96J65 1359 aa18.01■□□□□ 0.47
DDB2-203ENST00000378601 ZNF609O15014 1411 aa18.01■□□□□ 0.47
DDB2-203ENST00000378601 ST3GAL1Q11201 340 aa18■□□□□ 0.47
DDB2-203ENST00000378601 ZNF589Q86UQ0 364 aaPredicted RBP18■□□□□ 0.47
DDB2-203ENST00000378601 CNPY2Q9Y2B0 182 aa18■□□□□ 0.47
DDB2-203ENST00000378601 GADD45BO75293 160 aaPredicted RBP18■□□□□ 0.47
DDB2-203ENST00000378601 MSNP26038 577 aaKnown RBP18■□□□□ 0.47
DDB2-203ENST00000378601 TOB2Q14106 344 aaPredicted RBP18■□□□□ 0.47
DDB2-203ENST00000378601 LARP1BQ659C4 914 aaKnown RBP18■□□□□ 0.47
DDB2-203ENST00000378601 CHAMP1Q96JM3 812 aa18■□□□□ 0.47
DDB2-203ENST00000378601 NEK1Q96PY6 1258 aa18■□□□□ 0.47
DDB2-203ENST00000378601 CCDC39Q9UFE4 941 aa18■□□□□ 0.47
DDB2-203ENST00000378601 NOL7Q9UMY1 257 aaKnown RBP18■□□□□ 0.47
DDB2-203ENST00000378601 SHANK3Q9BYB0 1731 aa17.99■□□□□ 0.47
DDB2-203ENST00000378601 KRT85P78386 507 aa17.99■□□□□ 0.47
DDB2-203ENST00000378601 TTLL7Q6ZT98 887 aa17.99■□□□□ 0.47
DDB2-203ENST00000378601 LLPHQ9BRT6 129 aaKnown RBP17.99■□□□□ 0.47
DDB2-203ENST00000378601 AKAP2Q9Y2D5 859 aa17.99■□□□□ 0.47
DDB2-203ENST00000378601 TCIRG1Q13488 830 aa17.98■□□□□ 0.47
DDB2-203ENST00000378601 PAG1Q9NWQ8 432 aa17.98■□□□□ 0.47
DDB2-203ENST00000378601 PIP4K2AP48426 406 aaPredicted RBP17.97■□□□□ 0.47
DDB2-203ENST00000378601 ZMYM1Q5SVZ6 1142 aa17.97■□□□□ 0.47
DDB2-203ENST00000378601 DNAJC2Q99543 621 aaKnown RBP17.97■□□□□ 0.47
DDB2-203ENST00000378601 SCAND2PQ9GZW5 306 aaPredicted RBP17.97■□□□□ 0.47
DDB2-203ENST00000378601 PCCAP05165 728 aaPredicted RBP17.96■□□□□ 0.47
DDB2-203ENST00000378601 ZFYP08048 801 aaPredicted RBP17.96■□□□□ 0.47
DDB2-203ENST00000378601 GTF3C6Q969F1 213 aa17.96■□□□□ 0.47
DDB2-203ENST00000378601 GDPD2Q9HCC8 539 aa17.96■□□□□ 0.47
DDB2-203ENST00000378601 TMOD3Q9NYL9 352 aa17.96■□□□□ 0.47
DDB2-203ENST00000378601 KIF3AQ9Y496 699 aa17.96■□□□□ 0.47
DDB2-203ENST00000378601 NHSL1Q5SYE7 1610 aa17.96■□□□□ 0.47
DDB2-203ENST00000378601 VPS37CA5D8V6 355 aaPredicted RBP17.96■□□□□ 0.46
DDB2-203ENST00000378601 ZNF500O60304 480 aaPredicted RBP17.96■□□□□ 0.46
DDB2-203ENST00000378601 A1BGP04217 495 aa17.96■□□□□ 0.46
DDB2-203ENST00000378601 EVA1CP58658 441 aa17.96■□□□□ 0.46
DDB2-203ENST00000378601 HSP90AB3PQ58FF7 597 aa17.96■□□□□ 0.46
DDB2-203ENST00000378601 CEP126Q9P2H0 1117 aa17.96■□□□□ 0.46
DDB2-203ENST00000378601 CHMP3Q9Y3E7 222 aa17.96■□□□□ 0.46
DDB2-203ENST00000378601 LRP6O75581 1613 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms