RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 PI4KAP1Q8N8J0 262 aa21.82■■□□□ 1.08
RER1-202ENST00000378512 MYD88Q99836 296 aa21.81■■□□□ 1.08
RER1-202ENST00000378512 MAP3K2Q9Y2U5 619 aa21.81■■□□□ 1.08
RER1-202ENST00000378512 LRRC37AA6NMS7 1700 aa21.81■■□□□ 1.08
RER1-202ENST00000378512 SCN4AP35499 1836 aa21.81■■□□□ 1.08
RER1-202ENST00000378512 ABCC4O15439 1325 aa21.81■■□□□ 1.08
RER1-202ENST00000378512 FLIIQ13045 1269 aa21.8■■□□□ 1.08
RER1-202ENST00000378512 CC2D2BQ6DHV5 1058 aa21.8■■□□□ 1.08
RER1-202ENST00000378512 ZBTB38Q8NAP3 1195 aaPredicted RBP21.8■■□□□ 1.08
RER1-202ENST00000378512 FAM89AQ96GI7 184 aa21.8■■□□□ 1.08
RER1-202ENST00000378512 MYH3P11055 1940 aa21.8■■□□□ 1.08
RER1-202ENST00000378512 E9PSI1 815 aa21.8■■□□□ 1.08
RER1-202ENST00000378512 IGKV5-2P06315 115 aa21.8■■□□□ 1.08
RER1-202ENST00000378512 SLFN5Q08AF3 891 aa21.8■■□□□ 1.08
RER1-202ENST00000378512 SF3B3Q15393 1217 aaKnown RBP21.8■■□□□ 1.08
RER1-202ENST00000378512 TRMT2AQ8IZ69 625 aaKnown RBP21.8■■□□□ 1.08
RER1-202ENST00000378512 MIER1Q8N108 512 aa21.8■■□□□ 1.08
RER1-202ENST00000378512 IQCA1LA6NCM1 817 aa21.79■■□□□ 1.08
RER1-202ENST00000378512 EAPPQ56P03 285 aaPredicted RBP21.79■■□□□ 1.08
RER1-202ENST00000378512 LTBP1Q14766 1721 aa21.78■■□□□ 1.08
RER1-202ENST00000378512 PCCAP05165 728 aaPredicted RBP21.78■■□□□ 1.08
RER1-202ENST00000378512 GRIPAP1Q4V328 841 aa21.78■■□□□ 1.08
RER1-202ENST00000378512 CWC25Q9NXE8 425 aaPredicted RBP21.78■■□□□ 1.08
RER1-202ENST00000378512 HACL1Q9UJ83 578 aa21.78■■□□□ 1.08
RER1-202ENST00000378512 ADAMTSL1Q8N6G6 1762 aa21.77■■□□□ 1.08
RER1-202ENST00000378512 EPHX2P34913 555 aa21.77■■□□□ 1.08
RER1-202ENST00000378512 LDHDQ86WU2 507 aa21.77■■□□□ 1.08
RER1-202ENST00000378512 LARGE2Q8N3Y3 721 aa21.77■■□□□ 1.08
RER1-202ENST00000378512 JDP2Q8WYK2 163 aa21.77■■□□□ 1.08
RER1-202ENST00000378512 ATP6V0A2Q9Y487 856 aa21.77■■□□□ 1.08
RER1-202ENST00000378512 GJA3Q9Y6H8 435 aa21.77■■□□□ 1.08
RER1-202ENST00000378512 COL4A1P02462 1669 aa21.77■■□□□ 1.08
RER1-202ENST00000378512 IRS4O14654 1257 aaPredicted RBP21.76■■□□□ 1.07
RER1-202ENST00000378512 CDHR2Q9BYE9 1310 aa21.76■■□□□ 1.07
RER1-202ENST00000378512 BBOX1O75936 387 aa21.75■■□□□ 1.07
RER1-202ENST00000378512 AOC3Q16853 763 aa21.75■■□□□ 1.07
RER1-202ENST00000378512 GPC2Q8N158 579 aa21.75■■□□□ 1.07
RER1-202ENST00000378512 NEURL1BA8MQ27 555 aa21.74■■□□□ 1.07
RER1-202ENST00000378512 RTL5Q5HYW3 569 aaPredicted RBP21.74■■□□□ 1.07
RER1-202ENST00000378512 PASKQ96RG2 1323 aa21.74■■□□□ 1.07
RER1-202ENST00000378512 ITGBL1O95965 494 aaPredicted RBP21.73■■□□□ 1.07
RER1-202ENST00000378512 NEXNQ0ZGT2 675 aa21.73■■□□□ 1.07
RER1-202ENST00000378512 FKBP5Q13451 457 aaPredicted RBP21.73■■□□□ 1.07
RER1-202ENST00000378512 GRAPQ13588 217 aa21.73■■□□□ 1.07
RER1-202ENST00000378512 DDX46Q7L014 1031 aaKnown RBP21.73■■□□□ 1.07
RER1-202ENST00000378512 GRAPLQ8TC17 118 aaPredicted RBP21.73■■□□□ 1.07
RER1-202ENST00000378512 DNAAF4Q8WXU2 420 aa21.73■■□□□ 1.07
RER1-202ENST00000378512 MKRN1Q9UHC7 482 aaKnown RBP21.73■■□□□ 1.07
RER1-202ENST00000378512 CLEC11AQ9Y240 323 aa21.73■■□□□ 1.07
RER1-202ENST00000378512 PPIP5K2O43314 1243 aa21.72■■□□□ 1.07
RER1-202ENST00000378512 HSP90B1P14625 803 aaKnown RBP21.72■■□□□ 1.07
RER1-202ENST00000378512 EIF6P56537 245 aaKnown RBP21.72■■□□□ 1.07
RER1-202ENST00000378512 CWF19L2Q2TBE0 894 aaKnown RBP21.72■■□□□ 1.07
RER1-202ENST00000378512 MAP1SQ66K74 1059 aaPredicted RBP21.72■■□□□ 1.07
RER1-202ENST00000378512 SP8Q8IXZ3 490 aa21.72■■□□□ 1.07
RER1-202ENST00000378512 CDCA7LQ96GN5 454 aa21.72■■□□□ 1.07
RER1-202ENST00000378512 CREBZFQ9NS37 354 aa21.72■■□□□ 1.07
RER1-202ENST00000378512 SCNN1DP51172 638 aa21.72■■□□□ 1.07
RER1-202ENST00000378512 COL13A1Q5TAT6 717 aaPredicted RBP21.72■■□□□ 1.07
RER1-202ENST00000378512 TMC4Q7Z404 712 aa21.72■■□□□ 1.07
RER1-202ENST00000378512 DUOX1Q9NRD9 1551 aa21.71■■□□□ 1.07
RER1-202ENST00000378512 H7C1W4 665 aa21.71■■□□□ 1.07
RER1-202ENST00000378512 PDE8AO60658 829 aa21.71■■□□□ 1.07
RER1-202ENST00000378512 EPS15P42566 896 aa21.71■■□□□ 1.07
RER1-202ENST00000378512 NIM1KQ8IY84 436 aa21.71■■□□□ 1.07
RER1-202ENST00000378512 LINS1Q8NG48 757 aa21.71■■□□□ 1.07
RER1-202ENST00000378512 RTFDC1Q9BY42 306 aaPredicted RBP21.71■■□□□ 1.07
RER1-202ENST00000378512 GCKRQ14397 625 aa21.7■■□□□ 1.06
RER1-202ENST00000378512 HSPA1AP0DMV8 641 aaKnown RBP21.69■■□□□ 1.06
RER1-202ENST00000378512 HSPA1BP0DMV9 641 aaKnown RBP21.69■■□□□ 1.06
RER1-202ENST00000378512 CASP7P55210 303 aa21.69■■□□□ 1.06
RER1-202ENST00000378512 DPP8Q6V1X1 898 aaPredicted RBP21.69■■□□□ 1.06
RER1-202ENST00000378512 CELF1Q92879 486 aaKnown RBP21.69■■□□□ 1.06
RER1-202ENST00000378512 FMR1Q06787 632 aaKnown RBP eCLIP21.68■■□□□ 1.06
RER1-202ENST00000378512 BEND3Q5T5X7 828 aa21.68■■□□□ 1.06
RER1-202ENST00000378512 MPNDQ8N594 471 aa21.68■■□□□ 1.06
RER1-202ENST00000378512 VPS33BQ9H267 617 aa21.68■■□□□ 1.06
RER1-202ENST00000378512 RTL9Q8NET4 1388 aa21.67■■□□□ 1.06
RER1-202ENST00000378512 PNMA8AQ86V59 439 aaPredicted RBP21.67■■□□□ 1.06
RER1-202ENST00000378512 CNTROBQ8N137 903 aa21.67■■□□□ 1.06
RER1-202ENST00000378512 MRPL50Q8N5N7 158 aaKnown RBP21.67■■□□□ 1.06
RER1-202ENST00000378512 JARID2Q92833 1246 aaPredicted RBP21.67■■□□□ 1.06
RER1-202ENST00000378512 PLA2G12BQ9BX93 195 aa21.67■■□□□ 1.06
RER1-202ENST00000378512 TMX4Q9H1E5 349 aaPredicted RBP21.67■■□□□ 1.06
RER1-202ENST00000378512 F6X3S4 739 aa21.66■■□□□ 1.06
RER1-202ENST00000378512 CT47B1P0C2W7 299 aaPredicted RBP21.66■■□□□ 1.06
RER1-202ENST00000378512 CXCL9Q07325 125 aa21.66■■□□□ 1.06
RER1-202ENST00000378512 CCDC152Q4G0S7 254 aa21.65■■□□□ 1.06
RER1-202ENST00000378512 ZNRF3Q9ULT6 936 aa21.65■■□□□ 1.06
RER1-202ENST00000378512 CNTNAP1P78357 1384 aa21.65■■□□□ 1.06
RER1-202ENST00000378512 TMEM88BA6NKF7 163 aa21.64■■□□□ 1.06
RER1-202ENST00000378512 LMOD1P29536 600 aaPredicted RBP21.64■■□□□ 1.06
RER1-202ENST00000378512 CTSWP56202 376 aa21.64■■□□□ 1.06
RER1-202ENST00000378512 RPS8P62241 208 aaKnown RBP21.64■■□□□ 1.06
RER1-202ENST00000378512 ALDH1L2Q3SY69 923 aa21.64■■□□□ 1.06
RER1-202ENST00000378512 TTLL11Q8NHH1 800 aa21.64■■□□□ 1.06
RER1-202ENST00000378512 SSH1Q8WYL5 1049 aa21.64■■□□□ 1.06
RER1-202ENST00000378512 SEC31BQ9NQW1 1179 aa21.64■■□□□ 1.06
RER1-202ENST00000378512 RAD17O75943 681 aa21.63■■□□□ 1.05
RER1-202ENST00000378512 KIAA2012Q0VF49 1180 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms