RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 PARP3Q9Y6F1 533 aa19.64■□□□□ 0.73
CCDC107-204ENST00000378409 TAF1P21675 1872 aa19.64■□□□□ 0.73
CCDC107-204ENST00000378409 ST5P78524 1137 aa19.63■□□□□ 0.73
CCDC107-204ENST00000378409 SLC10A5Q5PT55 438 aa19.63■□□□□ 0.73
CCDC107-204ENST00000378409 CCDC85AQ96PX6 553 aaPredicted RBP19.63■□□□□ 0.73
CCDC107-204ENST00000378409 CSF1RP07333 972 aa19.62■□□□□ 0.73
CCDC107-204ENST00000378409 FAM161AQ3B820 660 aa19.62■□□□□ 0.73
CCDC107-204ENST00000378409 TTLL11Q8NHH1 800 aa19.62■□□□□ 0.73
CCDC107-204ENST00000378409 RIC1Q4ADV7 1423 aa19.61■□□□□ 0.73
CCDC107-204ENST00000378409 PSDA5PKW4 1024 aaPredicted RBP19.61■□□□□ 0.73
CCDC107-204ENST00000378409 GCC1Q96CN9 775 aa19.61■□□□□ 0.73
CCDC107-204ENST00000378409 CCDC57Q2TAC2 916 aa19.6■□□□□ 0.73
CCDC107-204ENST00000378409 CCDC152Q4G0S7 254 aa19.6■□□□□ 0.73
CCDC107-204ENST00000378409 C3orf67Q6ZVT6 689 aa19.6■□□□□ 0.73
CCDC107-204ENST00000378409 SMC5Q8IY18 1101 aa19.6■□□□□ 0.73
CCDC107-204ENST00000378409 GREM2Q9H772 168 aa19.6■□□□□ 0.73
CCDC107-204ENST00000378409 DCTPP1Q9H773 170 aa19.6■□□□□ 0.73
CCDC107-204ENST00000378409 SURF6O75683 361 aaKnown RBP19.59■□□□□ 0.73
CCDC107-204ENST00000378409 ZBTB7AO95365 584 aa19.59■□□□□ 0.73
CCDC107-204ENST00000378409 IFIT5Q13325 482 aaKnown RBP19.59■□□□□ 0.73
CCDC107-204ENST00000378409 KLHDC4Q8TBB5 520 aa19.59■□□□□ 0.73
CCDC107-204ENST00000378409 NLRP3Q96P20 1036 aa19.59■□□□□ 0.73
CCDC107-204ENST00000378409 PA2G4Q9UQ80 394 aaKnown RBP19.59■□□□□ 0.73
CCDC107-204ENST00000378409 EXOC6BQ9Y2D4 811 aa19.59■□□□□ 0.73
CCDC107-204ENST00000378409 LRP5O75197 1615 aa19.58■□□□□ 0.73
CCDC107-204ENST00000378409 ITGA6P23229 1130 aa19.58■□□□□ 0.72
CCDC107-204ENST00000378409 RFX5P48382 616 aaPredicted RBP19.58■□□□□ 0.72
CCDC107-204ENST00000378409 ANKRD18BA2A2Z9 1011 aa19.57■□□□□ 0.72
CCDC107-204ENST00000378409 APBB1O00213 710 aa19.57■□□□□ 0.72
CCDC107-204ENST00000378409 OS9Q13438 667 aaPredicted RBP19.57■□□□□ 0.72
CCDC107-204ENST00000378409 SF3B3Q15393 1217 aaKnown RBP19.57■□□□□ 0.72
CCDC107-204ENST00000378409 TAF7LQ5H9L4 462 aa19.57■□□□□ 0.72
CCDC107-204ENST00000378409 MTFR1LQ9H019 292 aa19.57■□□□□ 0.72
CCDC107-204ENST00000378409 SIL1Q9H173 461 aa19.57■□□□□ 0.72
CCDC107-204ENST00000378409 COPRSQ9NQ92 184 aa19.57■□□□□ 0.72
CCDC107-204ENST00000378409 RTL9Q8NET4 1388 aa19.57■□□□□ 0.72
CCDC107-204ENST00000378409 COL11A2P13942 1736 aaPredicted RBP19.56■□□□□ 0.72
CCDC107-204ENST00000378409 PTPN12Q05209 780 aaKnown RBP19.56■□□□□ 0.72
CCDC107-204ENST00000378409 ZNF594Q96JF6 807 aaPredicted RBP19.56■□□□□ 0.72
CCDC107-204ENST00000378409 CACNA1SQ13698 1873 aa19.56■□□□□ 0.72
CCDC107-204ENST00000378409 G3BP1Q13283 466 aaKnown RBP eCLIP19.55■□□□□ 0.72
CCDC107-204ENST00000378409 HSP90AB4PQ58FF6 505 aa19.55■□□□□ 0.72
CCDC107-204ENST00000378409 ATF5Q9Y2D1 282 aaPredicted RBP19.55■□□□□ 0.72
CCDC107-204ENST00000378409 NOP58Q9Y2X3 529 aaKnown RBP19.55■□□□□ 0.72
CCDC107-204ENST00000378409 ANKRD45Q5TZF3 282 aa19.54■□□□□ 0.72
CCDC107-204ENST00000378409 BRIP1Q9BX63 1249 aa19.54■□□□□ 0.72
CCDC107-204ENST00000378409 SEC31BQ9NQW1 1179 aa19.54■□□□□ 0.72
CCDC107-204ENST00000378409 ZBTB47Q9UFB7 747 aaPredicted RBP19.54■□□□□ 0.72
CCDC107-204ENST00000378409 PDZRN3Q9UPQ7 1066 aa19.54■□□□□ 0.72
CCDC107-204ENST00000378409 COL4A1P02462 1669 aa19.54■□□□□ 0.72
CCDC107-204ENST00000378409 KIF13BQ9NQT8 1826 aa19.53■□□□□ 0.72
CCDC107-204ENST00000378409 A0A1B0GUL6 1792 aa19.53■□□□□ 0.72
CCDC107-204ENST00000378409 RAB11FIP3O75154 756 aa19.53■□□□□ 0.72
CCDC107-204ENST00000378409 POLD1P28340 1107 aa19.53■□□□□ 0.72
CCDC107-204ENST00000378409 RPGRQ92834 1020 aaKnown RBP19.53■□□□□ 0.72
CCDC107-204ENST00000378409 BCL11AQ9H165 835 aa19.53■□□□□ 0.72
CCDC107-204ENST00000378409 NUCB1Q02818 461 aa19.52■□□□□ 0.72
CCDC107-204ENST00000378409 ERC1Q8IUD2 1116 aa19.52■□□□□ 0.72
CCDC107-204ENST00000378409 CDC5LQ99459 802 aaKnown RBP19.52■□□□□ 0.72
CCDC107-204ENST00000378409 LRRCC1Q9C099 1032 aa19.52■□□□□ 0.72
CCDC107-204ENST00000378409 EYA2O00167 538 aa19.51■□□□□ 0.71
CCDC107-204ENST00000378409 SMARCA5O60264 1052 aaPredicted RBP19.51■□□□□ 0.71
CCDC107-204ENST00000378409 PDE6BP35913 854 aa19.51■□□□□ 0.71
CCDC107-204ENST00000378409 CRY2Q49AN0 593 aa19.51■□□□□ 0.71
CCDC107-204ENST00000378409 DDX46Q7L014 1031 aaKnown RBP19.51■□□□□ 0.71
CCDC107-204ENST00000378409 CHD1LQ86WJ1 897 aa19.51■□□□□ 0.71
CCDC107-204ENST00000378409 PUS3Q9BZE2 481 aaKnown RBP19.51■□□□□ 0.71
CCDC107-204ENST00000378409 LNPKQ9C0E8 428 aa19.51■□□□□ 0.71
CCDC107-204ENST00000378409 C10orf71Q711Q0 1435 aa19.51■□□□□ 0.71
CCDC107-204ENST00000378409 DLEC1Q9Y238 1755 aa19.5■□□□□ 0.71
CCDC107-204ENST00000378409 KLRG2A4D1S0 409 aaPredicted RBP19.5■□□□□ 0.71
CCDC107-204ENST00000378409 CIAO1O76071 339 aa19.5■□□□□ 0.71
CCDC107-204ENST00000378409 IGHMBP2P38935 993 aaKnown RBP19.5■□□□□ 0.71
CCDC107-204ENST00000378409 LRRC24Q50LG9 513 aa19.5■□□□□ 0.71
CCDC107-204ENST00000378409 LDHAL6AQ6ZMR3 332 aa19.5■□□□□ 0.71
CCDC107-204ENST00000378409 RHPN1Q8TCX5 695 aa19.5■□□□□ 0.71
CCDC107-204ENST00000378409 KIF1BPQ96EK5 621 aa19.5■□□□□ 0.71
CCDC107-204ENST00000378409 CNNM1Q9NRU3 951 aa19.5■□□□□ 0.71
CCDC107-204ENST00000378409 IL15P40933 162 aaPredicted RBP19.49■□□□□ 0.71
CCDC107-204ENST00000378409 ATG9AQ7Z3C6 839 aa19.49■□□□□ 0.71
CCDC107-204ENST00000378409 SKAP1Q86WV1 359 aa19.49■□□□□ 0.71
CCDC107-204ENST00000378409 ANKRD18AQ8IVF6 992 aa19.49■□□□□ 0.71
CCDC107-204ENST00000378409 MPHOSPH8Q99549 860 aa19.49■□□□□ 0.71
CCDC107-204ENST00000378409 FBXO3Q9UK99 471 aa19.49■□□□□ 0.71
CCDC107-204ENST00000378409 SASH1O94885 1247 aa19.48■□□□□ 0.71
CCDC107-204ENST00000378409 CELF1Q92879 486 aaKnown RBP19.48■□□□□ 0.71
CCDC107-204ENST00000378409 RBM17Q96I25 401 aaKnown RBP19.48■□□□□ 0.71
CCDC107-204ENST00000378409 IL1RAPL2Q9NP60 686 aa19.48■□□□□ 0.71
CCDC107-204ENST00000378409 NPR1P16066 1061 aa19.46■□□□□ 0.71
CCDC107-204ENST00000378409 HOXA10P31260 410 aaPredicted RBP19.46■□□□□ 0.71
CCDC107-204ENST00000378409 RPS8P62241 208 aaKnown RBP19.46■□□□□ 0.71
CCDC107-204ENST00000378409 TFCP2Q12800 502 aa19.46■□□□□ 0.71
CCDC107-204ENST00000378409 C2CD5Q86YS7 1000 aa19.46■□□□□ 0.71
CCDC107-204ENST00000378409 RIPOR2Q9Y4F9 1068 aa19.46■□□□□ 0.71
CCDC107-204ENST00000378409 KIAA1551Q9HCM1 1747 aa19.45■□□□□ 0.7
CCDC107-204ENST00000378409 H0YIN7 160 aa19.45■□□□□ 0.7
CCDC107-204ENST00000378409 SRGNP10124 158 aa19.45■□□□□ 0.7
CCDC107-204ENST00000378409 RGS3P49796 1198 aa19.45■□□□□ 0.7
CCDC107-204ENST00000378409 GRAPQ13588 217 aa19.45■□□□□ 0.7
CCDC107-204ENST00000378409 METTL24Q5JXM2 366 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms