RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 BOLA2Q9H3K6 86 aa12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 ADGBQ8N7X0 1667 aa12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 EFCAB8A8MWE9 144 aa12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 SLC3A2P08195 630 aaKnown RBP12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 DNAJC21Q5F1R6 531 aaKnown RBP12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 NME9Q86XW9 330 aa12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 GEMIN8Q9NWZ8 242 aaKnown RBP12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 TCHHQ07283 1943 aa12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 SYNJ2O15056 1496 aa12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 ANKRD1Q15327 319 aa12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 ZNF396Q96N95 335 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF39-201ENST00000378387 ATP10BO94823 1461 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 PES1O00541 588 aaKnown RBP12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 ATP8B2P98198 1209 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 PPARDQ03181 441 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 AACSQ86V21 672 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 LTV1Q96GA3 475 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 DESI2Q9BSY9 194 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 CCDC8Q9H0W5 538 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 OSBPL3Q9H4L5 887 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 C9orf78Q9NZ63 289 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 A0A1W2PP64 1363 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 WDHD1O75717 1129 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 GUCY2CP25092 1073 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 MAGEA9P43362 315 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 NOP2P46087 812 aaKnown RBP12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 TEFQ10587 303 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 CCDC158Q5M9N0 1113 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 PACS2Q86VP3 889 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 EXOC4Q96A65 974 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 SASH3O75995 380 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 FLIIQ13045 1269 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 CREB3L3Q68CJ9 461 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 OLFM4Q6UX06 510 aa12.19□□□□□ -0.46
ARHGEF39-201ENST00000378387 ITSN2Q9NZM3 1697 aa12.18□□□□□ -0.46
ARHGEF39-201ENST00000378387 GLRX3O76003 335 aaKnown RBP12.18□□□□□ -0.46
ARHGEF39-201ENST00000378387 MUM1L1Q5H9M0 696 aa12.18□□□□□ -0.46
ARHGEF39-201ENST00000378387 NBPF11Q86T75 865 aa12.18□□□□□ -0.46
ARHGEF39-201ENST00000378387 GPR161Q8N6U8 529 aaKnown RBP12.18□□□□□ -0.46
ARHGEF39-201ENST00000378387 HINFPQ9BQA5 517 aa12.18□□□□□ -0.46
ARHGEF39-201ENST00000378387 BICC1Q9H694 974 aaKnown RBP12.18□□□□□ -0.46
ARHGEF39-201ENST00000378387 USP8P40818 1118 aa12.18□□□□□ -0.46
ARHGEF39-201ENST00000378387 HDXQ7Z353 690 aa12.18□□□□□ -0.46
ARHGEF39-201ENST00000378387 C14orf93Q9H972 538 aaKnown RBP12.18□□□□□ -0.46
ARHGEF39-201ENST00000378387 ADCY10Q96PN6 1610 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 TBC1D8O95759 1140 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 RAB11FIP4Q86YS3 637 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 FAM227BQ96M60 508 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 LSG1Q9H089 658 aaKnown RBP12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 RAI14Q9P0K7 980 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 IQSEC2Q5JU85 1478 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 ERLIN2O94905 339 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 BRD2P25440 801 aaKnown RBP12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 ATP6V1AP38606 617 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 FANCCQ00597 558 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 IQCB1Q15051 598 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 DPCR1Q3MIW9 517 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 CNNM3Q8NE01 707 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 TTC14Q96N46 770 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 N4BP1O75113 896 aaKnown RBP12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 CHMP4BP1P59074 171 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 SUGCTQ9HAC7 445 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 BRMS1Q9HCU9 246 aa12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 KDM5AP29375 1690 aaKnown RBP12.17□□□□□ -0.46
ARHGEF39-201ENST00000378387 ARHGAP31Q2M1Z3 1444 aa12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 TRAPPC8Q9Y2L5 1435 aa12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 SHANK2Q9UPX8 1470 aa12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 KIAA0754O94854 1291 aa12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 CDC25BP30305 580 aa12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 ARMCX5Q6P1M9 558 aa12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 NOC3LQ8WTT2 800 aaKnown RBP12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 ADKP55263 362 aaKnown RBP12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 C14orf37Q86TY3 774 aa12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 CRACR2AQ9BSW2 395 aa12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 FOXO3O43524 673 aa12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 ATP1A3P13637 1013 aa12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 ATP2B1P20020 1258 aa12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 OTUD7BQ6GQQ9 843 aa12.16□□□□□ -0.46
ARHGEF39-201ENST00000378387 PSDA5PKW4 1024 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 EBAG9O00559 213 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 CPLX1O14810 134 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 CBFA2T2O43439 604 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 TADA3O75528 432 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 GBP6Q6ZN66 633 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 USP28Q96RU2 1077 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 CXorf56Q9H5V9 222 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 KIF5CO60282 957 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 MARCKSP29966 332 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 FAM160A1Q05DH4 1040 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 FKBP15Q5T1M5 1219 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 RNF187Q5TA31 235 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 CNPY4Q8N129 248 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 DHX58Q96C10 678 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 FAM107BQ9H098 131 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 FAM204AQ9H8W3 233 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 NSD2O96028 1365 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 SYCP2Q9BX26 1530 aa12.15□□□□□ -0.46
ARHGEF39-201ENST00000378387 H3BQF6 201 aa12.15□□□□□ -0.47
ARHGEF39-201ENST00000378387 ECM2O94769 699 aaPredicted RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms