RNA–Protein interactions for RNA: ENST00000377755.8

KRT40-201, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-201ENST00000377755 FAM161AQ3B820 660 aa16.12■□□□□ 0.17
KRT40-201ENST00000377755 CHD1LQ86WJ1 897 aa16.12■□□□□ 0.17
KRT40-201ENST00000377755 NLGN1Q8N2Q7 840 aa16.12■□□□□ 0.17
KRT40-201ENST00000377755 PDGFDQ9GZP0 370 aaPredicted RBP16.12■□□□□ 0.17
KRT40-201ENST00000377755 ABCC12Q96J65 1359 aa16.12■□□□□ 0.17
KRT40-201ENST00000377755 SLC10A5Q5PT55 438 aa16.12■□□□□ 0.17
KRT40-201ENST00000377755 BCL11AQ9H165 835 aa16.12■□□□□ 0.17
KRT40-201ENST00000377755 SIL1Q9H173 461 aa16.12■□□□□ 0.17
KRT40-201ENST00000377755 GREM2Q9H772 168 aa16.12■□□□□ 0.17
KRT40-201ENST00000377755 COPRSQ9NQ92 184 aa16.12■□□□□ 0.17
KRT40-201ENST00000377755 DDX60Q8IY21 1712 aaKnown RBP16.12■□□□□ 0.17
KRT40-201ENST00000377755 POLRMTO00411 1230 aaKnown RBP16.11■□□□□ 0.17
KRT40-201ENST00000377755 SERPINB2P05120 415 aa16.11■□□□□ 0.17
KRT40-201ENST00000377755 PDE4AP27815 886 aa16.11■□□□□ 0.17
KRT40-201ENST00000377755 RGS3P49796 1198 aa16.11■□□□□ 0.17
KRT40-201ENST00000377755 C3orf67Q6ZVT6 689 aa16.11■□□□□ 0.17
KRT40-201ENST00000377755 ZNF594Q96JF6 807 aaPredicted RBP16.11■□□□□ 0.17
KRT40-201ENST00000377755 CCDC57Q2TAC2 916 aa16.1■□□□□ 0.17
KRT40-201ENST00000377755 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
KRT40-201ENST00000377755 NPHP1O15259 732 aa16.1■□□□□ 0.17
KRT40-201ENST00000377755 RAB11FIP3O75154 756 aa16.1■□□□□ 0.17
KRT40-201ENST00000377755 HSP90B1P14625 803 aaKnown RBP16.1■□□□□ 0.17
KRT40-201ENST00000377755 ITGA6P23229 1130 aa16.1■□□□□ 0.17
KRT40-201ENST00000377755 IFIT5Q13325 482 aaKnown RBP16.1■□□□□ 0.17
KRT40-201ENST00000377755 PRR5LQ6MZQ0 368 aa16.1■□□□□ 0.17
KRT40-201ENST00000377755 ILDR2Q71H61 639 aa16.1■□□□□ 0.17
KRT40-201ENST00000377755 CNBD1Q8NA66 436 aa16.1■□□□□ 0.17
KRT40-201ENST00000377755 LRRCC1Q9C099 1032 aa16.1■□□□□ 0.17
KRT40-201ENST00000377755 MYH3P11055 1940 aa16.09■□□□□ 0.17
KRT40-201ENST00000377755 QSER1Q2KHR3 1735 aa16.09■□□□□ 0.17
KRT40-201ENST00000377755 G3BP1Q13283 466 aaKnown RBP eCLIP16.09■□□□□ 0.17
KRT40-201ENST00000377755 OS9Q13438 667 aaPredicted RBP16.09■□□□□ 0.17
KRT40-201ENST00000377755 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
KRT40-201ENST00000377755 C16orf71Q8IYS4 520 aaPredicted RBP16.09■□□□□ 0.17
KRT40-201ENST00000377755 RHPN1Q8TCX5 695 aa16.09■□□□□ 0.17
KRT40-201ENST00000377755 SASH1O94885 1247 aa16.08■□□□□ 0.17
KRT40-201ENST00000377755 IL1RAPL2Q9NP60 686 aa16.08■□□□□ 0.17
KRT40-201ENST00000377755 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.08■□□□□ 0.17
KRT40-201ENST00000377755 LAMB2P55268 1798 aa16.08■□□□□ 0.16
KRT40-201ENST00000377755 MMP10P09238 476 aa16.08■□□□□ 0.16
KRT40-201ENST00000377755 SF3B3Q15393 1217 aaKnown RBP16.08■□□□□ 0.16
KRT40-201ENST00000377755 CCDC152Q4G0S7 254 aa16.08■□□□□ 0.16
KRT40-201ENST00000377755 NLRP3Q96P20 1036 aa16.08■□□□□ 0.16
KRT40-201ENST00000377755 SEC31BQ9NQW1 1179 aa16.08■□□□□ 0.16
KRT40-201ENST00000377755 ANKRD18BA2A2Z9 1011 aa16.07■□□□□ 0.16
KRT40-201ENST00000377755 LRRC24Q50LG9 513 aa16.07■□□□□ 0.16
KRT40-201ENST00000377755 KIF1BPQ96EK5 621 aa16.07■□□□□ 0.16
KRT40-201ENST00000377755 PUS3Q9BZE2 481 aaKnown RBP16.07■□□□□ 0.16
KRT40-201ENST00000377755 ZBTB47Q9UFB7 747 aaPredicted RBP16.07■□□□□ 0.16
KRT40-201ENST00000377755 ATG9AQ7Z3C6 839 aa16.06■□□□□ 0.16
KRT40-201ENST00000377755 OTUD7AQ8TE49 926 aaPredicted RBP16.06■□□□□ 0.16
KRT40-201ENST00000377755 EYA2O00167 538 aa16.05■□□□□ 0.16
KRT40-201ENST00000377755 TAF7LQ5H9L4 462 aa16.05■□□□□ 0.16
KRT40-201ENST00000377755 ERC1Q8IUD2 1116 aa16.05■□□□□ 0.16
KRT40-201ENST00000377755 ST5P78524 1137 aa16.05■□□□□ 0.16
KRT40-201ENST00000377755 PARP3Q9Y6F1 533 aa16.05■□□□□ 0.16
KRT40-201ENST00000377755 RTL9Q8NET4 1388 aa16.05■□□□□ 0.16
KRT40-201ENST00000377755 TNRC6CQ9HCJ0 1690 aaKnown RBP16.04■□□□□ 0.16
KRT40-201ENST00000377755 CIAO1O76071 339 aa16.03■□□□□ 0.16
KRT40-201ENST00000377755 IL15P40933 162 aaPredicted RBP16.03■□□□□ 0.16
KRT40-201ENST00000377755 TFCP2Q12800 502 aa16.03■□□□□ 0.16
KRT40-201ENST00000377755 LDHAL6AQ6ZMR3 332 aa16.03■□□□□ 0.16
KRT40-201ENST00000377755 CASZ1Q86V15 1759 aa16.03■□□□□ 0.16
KRT40-201ENST00000377755 PLEKHM2Q8IWE5 1019 aa16.03■□□□□ 0.16
KRT40-201ENST00000377755 FBXO3Q9UK99 471 aa16.03■□□□□ 0.16
KRT40-201ENST00000377755 RIPOR2Q9Y4F9 1068 aa16.03■□□□□ 0.16
KRT40-201ENST00000377755 COL4A1P02462 1669 aa16.02■□□□□ 0.16
KRT40-201ENST00000377755 MAPK8IP2Q13387 824 aaPredicted RBP16.02■□□□□ 0.16
KRT40-201ENST00000377755 R3HDM1Q15032 1099 aaKnown RBP16.02■□□□□ 0.16
KRT40-201ENST00000377755 SLC16A10Q8TF71 515 aa16.02■□□□□ 0.16
KRT40-201ENST00000377755 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.15
KRT40-201ENST00000377755 RIC1Q4ADV7 1423 aa16.01■□□□□ 0.15
KRT40-201ENST00000377755 SALL3Q9BXA9 1300 aa16.01■□□□□ 0.15
KRT40-201ENST00000377755 CLASRPQ8N2M8 674 aaKnown RBP16.01■□□□□ 0.15
KRT40-201ENST00000377755 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
KRT40-201ENST00000377755 EAF2Q96CJ1 260 aaPredicted RBP16.01■□□□□ 0.15
KRT40-201ENST00000377755 CNNM1Q9NRU3 951 aa16.01■□□□□ 0.15
KRT40-201ENST00000377755 TAF1P21675 1872 aa16.01■□□□□ 0.15
KRT40-201ENST00000377755 MPHOSPH8Q99549 860 aa16.01■□□□□ 0.15
KRT40-201ENST00000377755 IGHMBP2P38935 993 aaKnown RBP16■□□□□ 0.15
KRT40-201ENST00000377755 CRY2Q49AN0 593 aa16■□□□□ 0.15
KRT40-201ENST00000377755 CDC5LQ99459 802 aaKnown RBP16■□□□□ 0.15
KRT40-201ENST00000377755 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
KRT40-201ENST00000377755 KLRG2A4D1S0 409 aaPredicted RBP15.99■□□□□ 0.15
KRT40-201ENST00000377755 ZBTB7AO95365 584 aa15.99■□□□□ 0.15
KRT40-201ENST00000377755 TNNI3KQ59H18 835 aa15.99■□□□□ 0.15
KRT40-201ENST00000377755 TSHZ3Q63HK5 1081 aa15.99■□□□□ 0.15
KRT40-201ENST00000377755 DDX46Q7L014 1031 aaKnown RBP15.99■□□□□ 0.15
KRT40-201ENST00000377755 AACSQ86V21 672 aa15.99■□□□□ 0.15
KRT40-201ENST00000377755 ANKRD18AQ8IVF6 992 aa15.99■□□□□ 0.15
KRT40-201ENST00000377755 CCDC8Q9H0W5 538 aaPredicted RBP15.99■□□□□ 0.15
KRT40-201ENST00000377755 FPGT-TNNI3KV9GXZ4 949 aa15.99■□□□□ 0.15
KRT40-201ENST00000377755 PDE1AP54750 535 aa15.98■□□□□ 0.15
KRT40-201ENST00000377755 CEP126Q9P2H0 1117 aa15.98■□□□□ 0.15
KRT40-201ENST00000377755 LRP5O75197 1615 aa15.98■□□□□ 0.15
KRT40-201ENST00000377755 PSDA5PKW4 1024 aaPredicted RBP15.98■□□□□ 0.15
KRT40-201ENST00000377755 IFIT2P09913 472 aaKnown RBP15.98■□□□□ 0.15
KRT40-201ENST00000377755 MX1P20591 662 aa15.98■□□□□ 0.15
KRT40-201ENST00000377755 RPS8P62241 208 aaKnown RBP15.98■□□□□ 0.15
KRT40-201ENST00000377755 METTL24Q5JXM2 366 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms