RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 CSB-PGBD3P0DP91 1061 aa14.02□□□□□ -0.16
TNFRSF9-201ENST00000377507 TERF1P54274 439 aa14.02□□□□□ -0.16
TNFRSF9-201ENST00000377507 TFCP2Q12800 502 aa14.02□□□□□ -0.16
TNFRSF9-201ENST00000377507 NECAB1Q8N987 351 aa14.02□□□□□ -0.16
TNFRSF9-201ENST00000377507 DDX17Q92841 729 aaKnown RBP14.02□□□□□ -0.16
TNFRSF9-201ENST00000377507 FUCA2Q9BTY2 467 aa14.02□□□□□ -0.16
TNFRSF9-201ENST00000377507 SPATA31A3Q5VYP0 1347 aa14.02□□□□□ -0.16
TNFRSF9-201ENST00000377507 ARFGEF2Q9Y6D5 1785 aa14.02□□□□□ -0.16
TNFRSF9-201ENST00000377507 LAMB4A4D0S4 1761 aa14.02□□□□□ -0.17
TNFRSF9-201ENST00000377507 PDCP20941 246 aa14.02□□□□□ -0.17
TNFRSF9-201ENST00000377507 CABP4P57796 275 aa14.02□□□□□ -0.17
TNFRSF9-201ENST00000377507 DNM1Q05193 864 aaKnown RBP14.02□□□□□ -0.17
TNFRSF9-201ENST00000377507 TOB2Q14106 344 aaPredicted RBP14.02□□□□□ -0.17
TNFRSF9-201ENST00000377507 KRT32Q14532 448 aa14.02□□□□□ -0.17
TNFRSF9-201ENST00000377507 UBE3BQ7Z3V4 1068 aa14.02□□□□□ -0.17
TNFRSF9-201ENST00000377507 HAUS7Q99871 368 aa14.02□□□□□ -0.17
TNFRSF9-201ENST00000377507 A0A087WZG4 1122 aa14.01□□□□□ -0.17
TNFRSF9-201ENST00000377507 H7C1W4 665 aa14.01□□□□□ -0.17
TNFRSF9-201ENST00000377507 FIBPO43427 364 aa14.01□□□□□ -0.17
TNFRSF9-201ENST00000377507 CADPS2Q86UW7 1296 aa14.01□□□□□ -0.17
TNFRSF9-201ENST00000377507 DDX54Q8TDD1 881 aaKnown RBP14.01□□□□□ -0.17
TNFRSF9-201ENST00000377507 CABLES1Q8TDN4 633 aa14.01□□□□□ -0.17
TNFRSF9-201ENST00000377507 TAF6LQ9Y6J9 622 aa14.01□□□□□ -0.17
TNFRSF9-201ENST00000377507 ELP1O95163 1332 aa14□□□□□ -0.17
TNFRSF9-201ENST00000377507 TPM2P07951 284 aa14□□□□□ -0.17
TNFRSF9-201ENST00000377507 FOXO4P98177 505 aa14□□□□□ -0.17
TNFRSF9-201ENST00000377507 LARP1BQ659C4 914 aaKnown RBP14□□□□□ -0.17
TNFRSF9-201ENST00000377507 PDZRN4Q6ZMN7 1036 aaPredicted RBP14□□□□□ -0.17
TNFRSF9-201ENST00000377507 EDC3Q96F86 508 aaKnown RBP14□□□□□ -0.17
TNFRSF9-201ENST00000377507 STRCP1A6NGW2 1772 aa14□□□□□ -0.17
TNFRSF9-201ENST00000377507 AFDNP55196 1824 aaKnown RBP14□□□□□ -0.17
TNFRSF9-201ENST00000377507 NBPF26B4DH59 902 aa14□□□□□ -0.17
TNFRSF9-201ENST00000377507 PIP4K2AP48426 406 aaPredicted RBP14□□□□□ -0.17
TNFRSF9-201ENST00000377507 CHRNA2Q15822 529 aa14□□□□□ -0.17
TNFRSF9-201ENST00000377507 NBPF14Q5TI25 921 aa14□□□□□ -0.17
TNFRSF9-201ENST00000377507 NBPF10Q6P3W6 841 aaKnown RBP14□□□□□ -0.17
TNFRSF9-201ENST00000377507 NBPF15Q8N660 670 aa14□□□□□ -0.17
TNFRSF9-201ENST00000377507 JARID2Q92833 1246 aaPredicted RBP14□□□□□ -0.17
TNFRSF9-201ENST00000377507 GPR108Q9NPR9 543 aa14□□□□□ -0.17
TNFRSF9-201ENST00000377507 ATP5J2-PTCD1G3V325 749 aa13.99□□□□□ -0.17
TNFRSF9-201ENST00000377507 PTCD1O75127 700 aaKnown RBP13.99□□□□□ -0.17
TNFRSF9-201ENST00000377507 DBNDD2Q9BQY9 259 aa13.99□□□□□ -0.17
TNFRSF9-201ENST00000377507 ZNF609O15014 1411 aa13.99□□□□□ -0.17
TNFRSF9-201ENST00000377507 MCMDC2Q4G0Z9 681 aa13.98□□□□□ -0.17
TNFRSF9-201ENST00000377507 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF9-201ENST00000377507 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF9-201ENST00000377507 ERVV-2B6SEH9 535 aa13.98□□□□□ -0.17
TNFRSF9-201ENST00000377507 NKX1-1Q15270 411 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF9-201ENST00000377507 LMBR1LQ6UX01 489 aa13.98□□□□□ -0.17
TNFRSF9-201ENST00000377507 CDC37L1Q7L3B6 337 aa13.98□□□□□ -0.17
TNFRSF9-201ENST00000377507 ATG9AQ7Z3C6 839 aa13.98□□□□□ -0.17
TNFRSF9-201ENST00000377507 KBTBD3Q8NAB2 608 aa13.98□□□□□ -0.17
TNFRSF9-201ENST00000377507 NEK1Q96PY6 1258 aa13.98□□□□□ -0.17
TNFRSF9-201ENST00000377507 SH3TC1Q8TE82 1336 aa13.97□□□□□ -0.17
TNFRSF9-201ENST00000377507 KRT85P78386 507 aa13.97□□□□□ -0.17
TNFRSF9-201ENST00000377507 TTC6Q86TZ1 520 aa13.97□□□□□ -0.17
TNFRSF9-201ENST00000377507 UBR2Q8IWV8 1755 aa13.97□□□□□ -0.17
TNFRSF9-201ENST00000377507 PALLDQ8WX93 1383 aa13.97□□□□□ -0.17
TNFRSF9-201ENST00000377507 TCEANC2Q96MN5 208 aa13.96□□□□□ -0.17
TNFRSF9-201ENST00000377507 ATG3Q9NT62 314 aa13.96□□□□□ -0.17
TNFRSF9-201ENST00000377507 PCDH11XQ9BZA7 1347 aa13.96□□□□□ -0.18
TNFRSF9-201ENST00000377507 PCDH11YQ9BZA8 1340 aa13.96□□□□□ -0.18
TNFRSF9-201ENST00000377507 DTNBO60941 627 aa13.96□□□□□ -0.18
TNFRSF9-201ENST00000377507 CYP21A2P08686 494 aa13.96□□□□□ -0.18
TNFRSF9-201ENST00000377507 HCLS1P14317 486 aaPredicted RBP13.96□□□□□ -0.18
TNFRSF9-201ENST00000377507 GTF3C6Q969F1 213 aa13.96□□□□□ -0.18
TNFRSF9-201ENST00000377507 CWC25Q9NXE8 425 aaPredicted RBP13.96□□□□□ -0.18
TNFRSF9-201ENST00000377507 NUP188Q5SRE5 1749 aa13.95□□□□□ -0.18
TNFRSF9-201ENST00000377507 WDR17Q8IZU2 1322 aa13.95□□□□□ -0.18
TNFRSF9-201ENST00000377507 KCPQ6ZWJ8 1503 aa13.95□□□□□ -0.18
TNFRSF9-201ENST00000377507 KDM4AO75164 1064 aa13.95□□□□□ -0.18
TNFRSF9-201ENST00000377507 GIMAP6Q6P9H5 292 aa13.95□□□□□ -0.18
TNFRSF9-201ENST00000377507 ZCRB1Q8TBF4 217 aaKnown RBP13.95□□□□□ -0.18
TNFRSF9-201ENST00000377507 SEC62Q99442 399 aaKnown RBP13.95□□□□□ -0.18
TNFRSF9-201ENST00000377507 SCAND2PQ9GZW5 306 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF9-201ENST00000377507 HELLSQ9NRZ9 838 aa13.95□□□□□ -0.18
TNFRSF9-201ENST00000377507 PAPPAQ13219 1627 aa13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 CIAO1O76071 339 aa13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 IL15P40933 162 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 TTLL7Q6ZT98 887 aa13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 CCDC191Q8NCU4 936 aa13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 NDUFB9Q9Y6M9 179 aa13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 TJP1Q07157 1748 aa13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 CHGBP05060 677 aa13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 HMGB1P09429 215 aaKnown RBP13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 CCDC129Q6ZRS4 1044 aa13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 DNAJC2Q99543 621 aaKnown RBP13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 DSCC1Q9BVC3 393 aa13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 USP25Q9UHP3 1055 aa13.94□□□□□ -0.18
TNFRSF9-201ENST00000377507 TNS2Q63HR2 1409 aa13.93□□□□□ -0.18
TNFRSF9-201ENST00000377507 ADCY5O95622 1261 aa13.93□□□□□ -0.18
TNFRSF9-201ENST00000377507 DDX46Q7L014 1031 aaKnown RBP13.93□□□□□ -0.18
TNFRSF9-201ENST00000377507 SMARCC2Q8TAQ2 1214 aa13.93□□□□□ -0.18
TNFRSF9-201ENST00000377507 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.93□□□□□ -0.18
TNFRSF9-201ENST00000377507 LLPHQ9BRT6 129 aaKnown RBP13.93□□□□□ -0.18
TNFRSF9-201ENST00000377507 AGXT2Q9BYV1 514 aa13.93□□□□□ -0.18
TNFRSF9-201ENST00000377507 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.93□□□□□ -0.18
TNFRSF9-201ENST00000377507 EYA2O00167 538 aa13.92□□□□□ -0.18
TNFRSF9-201ENST00000377507 ZMYM1Q5SVZ6 1142 aa13.92□□□□□ -0.18
TNFRSF9-201ENST00000377507 RBM43Q6ZSC3 357 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms