RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 LNPKQ9C0E8 428 aa17.69■□□□□ 0.42
UBA1-202ENST00000377269 ARFGEF2Q9Y6D5 1785 aa17.68■□□□□ 0.42
UBA1-202ENST00000377269 PHF14O94880 888 aa17.68■□□□□ 0.42
UBA1-202ENST00000377269 KIF20AO95235 890 aa17.68■□□□□ 0.42
UBA1-202ENST00000377269 RC3H1Q5TC82 1133 aaKnown RBP17.68■□□□□ 0.42
UBA1-202ENST00000377269 ISCA1Q9BUE6 129 aa17.68■□□□□ 0.42
UBA1-202ENST00000377269 COL5A3P25940 1745 aaPredicted RBP17.68■□□□□ 0.42
UBA1-202ENST00000377269 RPS6KA4O75676 772 aa17.67■□□□□ 0.42
UBA1-202ENST00000377269 LRSAM1Q6UWE0 723 aa17.67■□□□□ 0.42
UBA1-202ENST00000377269 RPAP2Q8IXW5 612 aaPredicted RBP17.67■□□□□ 0.42
UBA1-202ENST00000377269 CICQ96RK0 1608 aaPredicted RBP17.67■□□□□ 0.42
UBA1-202ENST00000377269 LY75O60449 1722 aa17.67■□□□□ 0.42
UBA1-202ENST00000377269 EPHA10Q5JZY3 1008 aa17.67■□□□□ 0.42
UBA1-202ENST00000377269 TBC1D9Q6ZT07 1266 aa17.67■□□□□ 0.42
UBA1-202ENST00000377269 SYNE4Q8N205 404 aa17.67■□□□□ 0.42
UBA1-202ENST00000377269 CWC25Q9NXE8 425 aaPredicted RBP17.67■□□□□ 0.42
UBA1-202ENST00000377269 UTYO14607 1347 aa17.67■□□□□ 0.42
UBA1-202ENST00000377269 ERVV-1B6SEH8 477 aa17.66■□□□□ 0.42
UBA1-202ENST00000377269 SRP68Q9UHB9 627 aaKnown RBP17.66■□□□□ 0.42
UBA1-202ENST00000377269 PLSCR1O15162 318 aa17.66■□□□□ 0.42
UBA1-202ENST00000377269 GTF2F1P35269 517 aaKnown RBP eCLIP17.66■□□□□ 0.42
UBA1-202ENST00000377269 SLC27A3Q5K4L6 730 aa17.66■□□□□ 0.42
UBA1-202ENST00000377269 RTCBQ9Y3I0 505 aaKnown RBP17.66■□□□□ 0.42
UBA1-202ENST00000377269 NUP188Q5SRE5 1749 aa17.66■□□□□ 0.42
UBA1-202ENST00000377269 N4BP2Q86UW6 1770 aaPredicted RBP17.65■□□□□ 0.42
UBA1-202ENST00000377269 CASP7P55210 303 aa17.65■□□□□ 0.42
UBA1-202ENST00000377269 PPP1R42Q7Z4L9 355 aa17.65■□□□□ 0.42
UBA1-202ENST00000377269 CCDC191Q8NCU4 936 aa17.65■□□□□ 0.42
UBA1-202ENST00000377269 GPT2Q8TD30 523 aa17.65■□□□□ 0.42
UBA1-202ENST00000377269 PRIMPOLQ96LW4 560 aa17.65■□□□□ 0.42
UBA1-202ENST00000377269 AK7Q96M32 723 aa17.65■□□□□ 0.42
UBA1-202ENST00000377269 BICC1Q9H694 974 aaKnown RBP17.65■□□□□ 0.42
UBA1-202ENST00000377269 ZNF831Q5JPB2 1677 aa17.65■□□□□ 0.42
UBA1-202ENST00000377269 UBN2Q6ZU65 1347 aa17.65■□□□□ 0.42
UBA1-202ENST00000377269 ATP8B2P98198 1209 aa17.65■□□□□ 0.42
UBA1-202ENST00000377269 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
UBA1-202ENST00000377269 FAM89AQ96GI7 184 aa17.65■□□□□ 0.42
UBA1-202ENST00000377269 RREB1Q92766 1687 aa17.65■□□□□ 0.42
UBA1-202ENST00000377269 FAM177BA6PVY3 158 aa17.64■□□□□ 0.42
UBA1-202ENST00000377269 NLRP10Q86W26 655 aa17.64■□□□□ 0.42
UBA1-202ENST00000377269 H7C1W4 665 aa17.64■□□□□ 0.41
UBA1-202ENST00000377269 APBB1O00213 710 aa17.64■□□□□ 0.41
UBA1-202ENST00000377269 KIAA2012Q0VF49 1180 aa17.64■□□□□ 0.41
UBA1-202ENST00000377269 RABEP1Q15276 862 aa17.64■□□□□ 0.41
UBA1-202ENST00000377269 ZNF710Q8N1W2 664 aa17.64■□□□□ 0.41
UBA1-202ENST00000377269 SRGAP3O43295 1099 aa17.63■□□□□ 0.41
UBA1-202ENST00000377269 EN1Q05925 392 aaPredicted RBP17.63■□□□□ 0.41
UBA1-202ENST00000377269 TRIM28Q13263 835 aaKnown RBP17.63■□□□□ 0.41
UBA1-202ENST00000377269 BCL2L12Q9HB09 334 aa17.63■□□□□ 0.41
UBA1-202ENST00000377269 CWC22Q9HCG8 908 aaKnown RBP17.63■□□□□ 0.41
UBA1-202ENST00000377269 LETM1O95202 739 aaPredicted RBP17.63■□□□□ 0.41
UBA1-202ENST00000377269 USPL1Q5W0Q7 1092 aa17.63■□□□□ 0.41
UBA1-202ENST00000377269 ZNF34Q8IZ26 560 aa17.63■□□□□ 0.41
UBA1-202ENST00000377269 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.62■□□□□ 0.41
UBA1-202ENST00000377269 HMGN5P82970 282 aaKnown RBP17.62■□□□□ 0.41
UBA1-202ENST00000377269 DCTPP1Q9H773 170 aa17.62■□□□□ 0.41
UBA1-202ENST00000377269 RBM27Q9P2N5 1060 aaKnown RBP17.62■□□□□ 0.41
UBA1-202ENST00000377269 EXOC6BQ9Y2D4 811 aa17.62■□□□□ 0.41
UBA1-202ENST00000377269 TMEM63CQ9P1W3 806 aa17.62■□□□□ 0.41
UBA1-202ENST00000377269 C4BP0C0L5 1744 aa17.62■□□□□ 0.41
UBA1-202ENST00000377269 PRPF40AO75400 957 aaKnown RBP17.61■□□□□ 0.41
UBA1-202ENST00000377269 ZNF827Q17R98 1081 aa17.61■□□□□ 0.41
UBA1-202ENST00000377269 HSP90AB3PQ58FF7 597 aa17.61■□□□□ 0.41
UBA1-202ENST00000377269 PPP4R3BQ5MIZ7 849 aa17.61■□□□□ 0.41
UBA1-202ENST00000377269 BICDL1Q6ZP65 573 aa17.61■□□□□ 0.41
UBA1-202ENST00000377269 NIP7Q9Y221 180 aaKnown RBP eCLIP17.61■□□□□ 0.41
UBA1-202ENST00000377269 EZH2Q15910 746 aaKnown RBP17.61■□□□□ 0.41
UBA1-202ENST00000377269 TRAPPC3LQ5T215 181 aa17.61■□□□□ 0.41
UBA1-202ENST00000377269 GCC1Q96CN9 775 aa17.61■□□□□ 0.41
UBA1-202ENST00000377269 NARFQ9UHQ1 456 aa17.61■□□□□ 0.41
UBA1-202ENST00000377269 TAF1LQ8IZX4 1826 aa17.61■□□□□ 0.41
UBA1-202ENST00000377269 ANKRD45Q5TZF3 282 aa17.6■□□□□ 0.41
UBA1-202ENST00000377269 SUSD4Q5VX71 490 aa17.6■□□□□ 0.41
UBA1-202ENST00000377269 DEFB132Q7Z7B7 95 aa17.6■□□□□ 0.41
UBA1-202ENST00000377269 SSH3Q8TE77 659 aa17.6■□□□□ 0.41
UBA1-202ENST00000377269 HMMRO75330 724 aa17.6■□□□□ 0.41
UBA1-202ENST00000377269 PKP1Q13835 747 aa17.6■□□□□ 0.41
UBA1-202ENST00000377269 KLHDC4Q8TBB5 520 aa17.6■□□□□ 0.41
UBA1-202ENST00000377269 TRMT112Q9UI30 125 aaKnown RBP17.6■□□□□ 0.41
UBA1-202ENST00000377269 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.6■□□□□ 0.413e-7■■□□□ 11.8
UBA1-202ENST00000377269 ZPR1O75312 459 aa17.59■□□□□ 0.41
UBA1-202ENST00000377269 RFC4P35249 363 aa17.59■□□□□ 0.41
UBA1-202ENST00000377269 POLA2Q14181 598 aa17.59■□□□□ 0.41
UBA1-202ENST00000377269 TBC1D9BQ66K14 1250 aa17.59■□□□□ 0.41
UBA1-202ENST00000377269 ZBTB38Q8NAP3 1195 aaPredicted RBP17.59■□□□□ 0.41
UBA1-202ENST00000377269 PA2G4Q9UQ80 394 aaKnown RBP17.59■□□□□ 0.41
UBA1-202ENST00000377269 SYCE3A1L190 88 aa17.59■□□□□ 0.41
UBA1-202ENST00000377269 CDC45O75419 566 aa17.59■□□□□ 0.41
UBA1-202ENST00000377269 FOXO4P98177 505 aa17.59■□□□□ 0.41
UBA1-202ENST00000377269 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.41
UBA1-202ENST00000377269 SMARCA5O60264 1052 aaPredicted RBP17.58■□□□□ 0.41
UBA1-202ENST00000377269 PCCAP05165 728 aaPredicted RBP17.58■□□□□ 0.41
UBA1-202ENST00000377269 MTX1Q13505 466 aa17.58■□□□□ 0.41
UBA1-202ENST00000377269 LMBR1LQ6UX01 489 aa17.58■□□□□ 0.41
UBA1-202ENST00000377269 CCDC85AQ96PX6 553 aaPredicted RBP17.58■□□□□ 0.41
UBA1-202ENST00000377269 CAMKK2Q96RR4 588 aa17.58■□□□□ 0.41
UBA1-202ENST00000377269 CBX1P83916 185 aa17.58■□□□□ 0.4
UBA1-202ENST00000377269 TFCP2L1Q9NZI6 479 aa17.58■□□□□ 0.4
UBA1-202ENST00000377269 ZDHHC9Q9Y397 364 aa17.58■□□□□ 0.4
UBA1-202ENST00000377269 CLEC4GQ6UXB4 293 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms