RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 PPEF1O14829 653 aaPredicted RBP18.3■□□□□ 0.52
UBE4B-203ENST00000377153 C21orf2O43822 256 aa18.3■□□□□ 0.52
UBE4B-203ENST00000377153 CTSWP56202 376 aa18.3■□□□□ 0.52
UBE4B-203ENST00000377153 SF3B3Q15393 1217 aaKnown RBP18.3■□□□□ 0.52
UBE4B-203ENST00000377153 ATF7IPQ6VMQ6 1270 aa18.3■□□□□ 0.52
UBE4B-203ENST00000377153 JARID2Q92833 1246 aaPredicted RBP18.3■□□□□ 0.52
UBE4B-203ENST00000377153 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
UBE4B-203ENST00000377153 TIAM2Q8IVF5 1701 aa18.29■□□□□ 0.52
UBE4B-203ENST00000377153 CCDC88AQ3V6T2 1871 aa18.29■□□□□ 0.52
UBE4B-203ENST00000377153 CCDC93Q567U6 631 aa18.29■□□□□ 0.52
UBE4B-203ENST00000377153 FTSJ3Q8IY81 847 aaKnown RBP18.29■□□□□ 0.52
UBE4B-203ENST00000377153 RCAN3Q9UKA8 241 aa18.29■□□□□ 0.52
UBE4B-203ENST00000377153 SBF1O95248 1867 aa18.29■□□□□ 0.52
UBE4B-203ENST00000377153 GRAPQ13588 217 aa18.28■□□□□ 0.52
UBE4B-203ENST00000377153 TMC4Q7Z404 712 aa18.28■□□□□ 0.52
UBE4B-203ENST00000377153 GRAPLQ8TC17 118 aaPredicted RBP18.28■□□□□ 0.52
UBE4B-203ENST00000377153 GOLGB1Q14789 3259 aaKnown RBP18.27■□□□□ 0.52
UBE4B-203ENST00000377153 TRIM27P14373 513 aa18.27■□□□□ 0.52
UBE4B-203ENST00000377153 CC2D2BQ6DHV5 1058 aa18.27■□□□□ 0.52
UBE4B-203ENST00000377153 PLA2G12BQ9BX93 195 aa18.27■□□□□ 0.52
UBE4B-203ENST00000377153 DICER1Q9UPY3 1922 aaKnown RBP18.26■□□□□ 0.51
UBE4B-203ENST00000377153 BBOX1O75936 387 aa18.26■□□□□ 0.51
UBE4B-203ENST00000377153 GRIPAP1Q4V328 841 aa18.26■□□□□ 0.51
UBE4B-203ENST00000377153 RTKN2Q8IZC4 609 aa18.26■□□□□ 0.51
UBE4B-203ENST00000377153 CCDC85AQ96PX6 553 aaPredicted RBP18.26■□□□□ 0.51
UBE4B-203ENST00000377153 CDC5LQ99459 802 aaKnown RBP18.26■□□□□ 0.51
UBE4B-203ENST00000377153 TAOK3Q9H2K8 898 aa18.26■□□□□ 0.51
UBE4B-203ENST00000377153 HDAC5Q9UQL6 1122 aa18.26■□□□□ 0.51
UBE4B-203ENST00000377153 RTL9Q8NET4 1388 aa18.26■□□□□ 0.51
UBE4B-203ENST00000377153 MS4A1P11836 297 aa18.25■□□□□ 0.51
UBE4B-203ENST00000377153 CASP7P55210 303 aa18.25■□□□□ 0.51
UBE4B-203ENST00000377153 CLUAP1Q96AJ1 413 aa18.25■□□□□ 0.51
UBE4B-203ENST00000377153 CHMP3Q9Y3E7 222 aa18.25■□□□□ 0.51
UBE4B-203ENST00000377153 NBPF7P0C2Y1 421 aaPredicted RBP18.24■□□□□ 0.51
UBE4B-203ENST00000377153 UBTFL1P0CB47 393 aaPredicted RBP18.24■□□□□ 0.51
UBE4B-203ENST00000377153 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.24■□□□□ 0.51
UBE4B-203ENST00000377153 TTLL11Q8NHH1 800 aa18.24■□□□□ 0.51
UBE4B-203ENST00000377153 UTYO14607 1347 aa18.23■□□□□ 0.51
UBE4B-203ENST00000377153 INTS3Q68E01 1043 aaKnown RBP18.23■□□□□ 0.51
UBE4B-203ENST00000377153 ANKRD18AQ8IVF6 992 aa18.23■□□□□ 0.51
UBE4B-203ENST00000377153 DZIP1LQ8IYY4 767 aaKnown RBP18.23■□□□□ 0.51
UBE4B-203ENST00000377153 ATP6V0A2Q9Y487 856 aa18.23■□□□□ 0.51
UBE4B-203ENST00000377153 LTBP3Q9NS15 1303 aa18.23■□□□□ 0.51
UBE4B-203ENST00000377153 FAM161AQ3B820 660 aa18.22■□□□□ 0.51
UBE4B-203ENST00000377153 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
UBE4B-203ENST00000377153 GREM2Q9H772 168 aa18.22■□□□□ 0.51
UBE4B-203ENST00000377153 COL4A1P02462 1669 aa18.22■□□□□ 0.51
UBE4B-203ENST00000377153 ANKRD18BA2A2Z9 1011 aa18.21■□□□□ 0.51
UBE4B-203ENST00000377153 GNAI3P08754 354 aa18.21■□□□□ 0.51
UBE4B-203ENST00000377153 LMNB1P20700 586 aa18.21■□□□□ 0.51
UBE4B-203ENST00000377153 YY1P25490 414 aa18.21■□□□□ 0.51
UBE4B-203ENST00000377153 IGHMBP2P38935 993 aaKnown RBP18.21■□□□□ 0.51
UBE4B-203ENST00000377153 RPS8P62241 208 aaKnown RBP18.21■□□□□ 0.51
UBE4B-203ENST00000377153 FKBP4Q02790 459 aaKnown RBP eCLIP18.21■□□□□ 0.51
UBE4B-203ENST00000377153 RASSF7Q02833 373 aa18.21■□□□□ 0.51
UBE4B-203ENST00000377153 IFIT5Q13325 482 aaKnown RBP18.21■□□□□ 0.51
UBE4B-203ENST00000377153 SP8Q8IXZ3 490 aa18.21■□□□□ 0.51
UBE4B-203ENST00000377153 C7orf43Q8WVR3 580 aa18.21■□□□□ 0.51
UBE4B-203ENST00000377153 USP44Q9H0E7 712 aa18.21■□□□□ 0.51
UBE4B-203ENST00000377153 SEC31BQ9NQW1 1179 aa18.21■□□□□ 0.51
UBE4B-203ENST00000377153 A0A1B0GUL6 1792 aa18.2■□□□□ 0.5
UBE4B-203ENST00000377153 NFKBIEO00221 500 aa18.2■□□□□ 0.5
UBE4B-203ENST00000377153 ITGA6P23229 1130 aa18.2■□□□□ 0.5
UBE4B-203ENST00000377153 CCDC57Q2TAC2 916 aa18.2■□□□□ 0.5
UBE4B-203ENST00000377153 TAF7LQ5H9L4 462 aa18.2■□□□□ 0.5
UBE4B-203ENST00000377153 LMBR1LQ6UX01 489 aa18.2■□□□□ 0.5
UBE4B-203ENST00000377153 SUCLG2Q96I99 432 aa18.2■□□□□ 0.5
UBE4B-203ENST00000377153 RNF181Q9P0P0 153 aa18.2■□□□□ 0.5
UBE4B-203ENST00000377153 LTBP1Q14766 1721 aa18.2■□□□□ 0.5
UBE4B-203ENST00000377153 CSF1RP07333 972 aa18.19■□□□□ 0.5
UBE4B-203ENST00000377153 FOXO4P98177 505 aa18.19■□□□□ 0.5
UBE4B-203ENST00000377153 OLFM4Q6UX06 510 aa18.19■□□□□ 0.5
UBE4B-203ENST00000377153 DPP8Q6V1X1 898 aaPredicted RBP18.19■□□□□ 0.5
UBE4B-203ENST00000377153 ITPRIPQ8IWB1 547 aa18.19■□□□□ 0.5
UBE4B-203ENST00000377153 SUPT20HQ8NEM7 779 aa18.19■□□□□ 0.5
UBE4B-203ENST00000377153 PSMD1Q99460 953 aa18.19■□□□□ 0.5
UBE4B-203ENST00000377153 MPHOSPH8Q99549 860 aa18.19■□□□□ 0.5
UBE4B-203ENST00000377153 SNED1Q8TER0 1413 aa18.18■□□□□ 0.5
UBE4B-203ENST00000377153 C9orf131Q5VYM1 1079 aa18.18■□□□□ 0.5
UBE4B-203ENST00000377153 MPNDQ8N594 471 aa18.18■□□□□ 0.5
UBE4B-203ENST00000377153 TMEM57Q8N5G2 664 aa18.18■□□□□ 0.5
UBE4B-203ENST00000377153 BICC1Q9H694 974 aaKnown RBP18.18■□□□□ 0.5
UBE4B-203ENST00000377153 TNNQ9UQP3 1299 aa18.18■□□□□ 0.5
UBE4B-203ENST00000377153 ZC3H4Q9UPT8 1303 aaKnown RBP18.18■□□□□ 0.5
UBE4B-203ENST00000377153 MEIS3Q99687 375 aa18.17■□□□□ 0.5
UBE4B-203ENST00000377153 DUOX1Q9NRD9 1551 aa18.17■□□□□ 0.5
UBE4B-203ENST00000377153 EPHA10Q5JZY3 1008 aa18.16■□□□□ 0.5
UBE4B-203ENST00000377153 BSDC1Q9NW68 430 aaPredicted RBP18.16■□□□□ 0.5
UBE4B-203ENST00000377153 ANKIB1Q9P2G1 1089 aa18.16■□□□□ 0.5
UBE4B-203ENST00000377153 NSFL1CQ9UNZ2 370 aaKnown RBP18.16■□□□□ 0.5
UBE4B-203ENST00000377153 UTRNP46939 3433 aa18.16■□□□□ 0.5
UBE4B-203ENST00000377153 RABL6Q3YEC7 729 aaPredicted RBP18.15■□□□□ 0.5
UBE4B-203ENST00000377153 ZNF277Q9NRM2 450 aaPredicted RBP18.15■□□□□ 0.5
UBE4B-203ENST00000377153 LRRFIP2Q9Y608 721 aaKnown RBP18.15■□□□□ 0.5
UBE4B-203ENST00000377153 IARSP41252 1262 aaKnown RBP18.14■□□□□ 0.49
UBE4B-203ENST00000377153 JDP2Q8WYK2 163 aa18.14■□□□□ 0.49
UBE4B-203ENST00000377153 KAZALD1Q96I82 304 aa18.14■□□□□ 0.49
UBE4B-203ENST00000377153 XDHP47989 1333 aa18.14■□□□□ 0.49
UBE4B-203ENST00000377153 PPIP5K2O43314 1243 aa18.13■□□□□ 0.49
UBE4B-203ENST00000377153 GNAI2P04899 355 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms