RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CACNA1FO60840 1977 aa15.56■□□□□ 0.08
VRK3-202ENST00000377011 ABCC4O15439 1325 aa15.55■□□□□ 0.08
VRK3-202ENST00000377011 NBR1Q14596 966 aa15.55■□□□□ 0.08
VRK3-202ENST00000377011 NLRP3Q96P20 1036 aa15.55■□□□□ 0.08
VRK3-202ENST00000377011 COL4A5P29400 1685 aa15.55■□□□□ 0.08
VRK3-202ENST00000377011 FKBP5Q13451 457 aaPredicted RBP15.54■□□□□ 0.08
VRK3-202ENST00000377011 CCDC85AQ96PX6 553 aaPredicted RBP15.54■□□□□ 0.08
VRK3-202ENST00000377011 TIAM2Q8IVF5 1701 aa15.54■□□□□ 0.08
VRK3-202ENST00000377011 NEURL1BA8MQ27 555 aa15.54■□□□□ 0.08
VRK3-202ENST00000377011 IRS4O14654 1257 aaPredicted RBP15.54■□□□□ 0.08
VRK3-202ENST00000377011 MRPL50Q8N5N7 158 aaKnown RBP15.54■□□□□ 0.08
VRK3-202ENST00000377011 RPGRQ92834 1020 aaKnown RBP15.54■□□□□ 0.08
VRK3-202ENST00000377011 ZBTB38Q8NAP3 1195 aaPredicted RBP15.53■□□□□ 0.08
VRK3-202ENST00000377011 SSH1Q8WYL5 1049 aa15.53■□□□□ 0.08
VRK3-202ENST00000377011 ZNF277Q9NRM2 450 aaPredicted RBP15.53■□□□□ 0.08
VRK3-202ENST00000377011 DDX58O95786 925 aaKnown RBP15.52■□□□□ 0.08
VRK3-202ENST00000377011 CCDC191Q8NCU4 936 aa15.52■□□□□ 0.08
VRK3-202ENST00000377011 DNAAF4Q8WXU2 420 aa15.52■□□□□ 0.08
VRK3-202ENST00000377011 CELF1Q92879 486 aaKnown RBP15.52■□□□□ 0.08
VRK3-202ENST00000377011 CRAMP1Q96RY5 1269 aa15.52■□□□□ 0.08
VRK3-202ENST00000377011 SEC31BQ9NQW1 1179 aa15.52■□□□□ 0.08
VRK3-202ENST00000377011 CWC25Q9NXE8 425 aaPredicted RBP15.52■□□□□ 0.08
VRK3-202ENST00000377011 CEP350Q5VT06 3117 aa15.52■□□□□ 0.08
VRK3-202ENST00000377011 DICER1Q9UPY3 1922 aaKnown RBP15.52■□□□□ 0.07
VRK3-202ENST00000377011 PCCAP05165 728 aaPredicted RBP15.51■□□□□ 0.07
VRK3-202ENST00000377011 CT47B1P0C2W7 299 aaPredicted RBP15.51■□□□□ 0.07
VRK3-202ENST00000377011 LMNB1P20700 586 aa15.51■□□□□ 0.07
VRK3-202ENST00000377011 ALDH1B1P30837 517 aa15.51■□□□□ 0.07
VRK3-202ENST00000377011 RBM17Q96I25 401 aaKnown RBP15.51■□□□□ 0.07
VRK3-202ENST00000377011 NMRK2Q9NPI5 230 aa15.51■□□□□ 0.07
VRK3-202ENST00000377011 PPEF1O14829 653 aaPredicted RBP15.51■□□□□ 0.07
VRK3-202ENST00000377011 BCAR3O75815 825 aa15.51■□□□□ 0.07
VRK3-202ENST00000377011 CASP7P55210 303 aa15.51■□□□□ 0.07
VRK3-202ENST00000377011 C8orf34Q49A92 452 aa15.51■□□□□ 0.07
VRK3-202ENST00000377011 CCDC93Q567U6 631 aa15.51■□□□□ 0.07
VRK3-202ENST00000377011 TAOK3Q9H2K8 898 aa15.51■□□□□ 0.07
VRK3-202ENST00000377011 SF3B3Q15393 1217 aaKnown RBP15.5■□□□□ 0.07
VRK3-202ENST00000377011 BEND3Q5T5X7 828 aa15.5■□□□□ 0.07
VRK3-202ENST00000377011 H7C1W4 665 aa15.49■□□□□ 0.07
VRK3-202ENST00000377011 GCKRQ14397 625 aa15.49■□□□□ 0.07
VRK3-202ENST00000377011 CLUAP1Q96AJ1 413 aa15.49■□□□□ 0.07
VRK3-202ENST00000377011 DUOX1Q9NRD9 1551 aa15.49■□□□□ 0.07
VRK3-202ENST00000377011 KIF3CO14782 793 aa15.48■□□□□ 0.07
VRK3-202ENST00000377011 UBE3BQ7Z3V4 1068 aa15.48■□□□□ 0.07
VRK3-202ENST00000377011 GPBP1L1Q9HC44 474 aaPredicted RBP15.48■□□□□ 0.07
VRK3-202ENST00000377011 LTBP3Q9NS15 1303 aa15.48■□□□□ 0.07
VRK3-202ENST00000377011 FKBP4Q02790 459 aaKnown RBP eCLIP15.48■□□□□ 0.07
VRK3-202ENST00000377011 GRAPQ13588 217 aa15.48■□□□□ 0.07
VRK3-202ENST00000377011 GRAPLQ8TC17 118 aaPredicted RBP15.48■□□□□ 0.07
VRK3-202ENST00000377011 WTIPA6NIX2 430 aaPredicted RBP15.47■□□□□ 0.07
VRK3-202ENST00000377011 RARSP54136 660 aaKnown RBP15.47■□□□□ 0.07
VRK3-202ENST00000377011 DDX46Q7L014 1031 aaKnown RBP15.47■□□□□ 0.07
VRK3-202ENST00000377011 CHMP4AQ9BY43 222 aa15.47■□□□□ 0.07
VRK3-202ENST00000377011 ATP6V0A2Q9Y487 856 aa15.47■□□□□ 0.07
VRK3-202ENST00000377011 LRRC37AA6NMS7 1700 aa15.47■□□□□ 0.07
VRK3-202ENST00000377011 SPEF2Q9C093 1822 aa15.47■□□□□ 0.07
VRK3-202ENST00000377011 NEXNQ0ZGT2 675 aa15.46■□□□□ 0.07
VRK3-202ENST00000377011 EPHA10Q5JZY3 1008 aa15.46■□□□□ 0.07
VRK3-202ENST00000377011 SLC4A10Q6U841 1118 aa15.46■□□□□ 0.07
VRK3-202ENST00000377011 LINS1Q8NG48 757 aa15.46■□□□□ 0.07
VRK3-202ENST00000377011 GPR101Q96P66 508 aaPredicted RBP15.46■□□□□ 0.07
VRK3-202ENST00000377011 TNNQ9UQP3 1299 aa15.46■□□□□ 0.07
VRK3-202ENST00000377011 CDHR2Q9BYE9 1310 aa15.46■□□□□ 0.07
VRK3-202ENST00000377011 MYH3P11055 1940 aa15.46■□□□□ 0.07
VRK3-202ENST00000377011 POTECB2RU33 542 aa15.46■□□□□ 0.06
VRK3-202ENST00000377011 PDE8AO60658 829 aa15.46■□□□□ 0.06
VRK3-202ENST00000377011 ZNF541Q9H0D2 1346 aa15.46■□□□□ 0.06
VRK3-202ENST00000377011 GREM2Q9H772 168 aa15.46■□□□□ 0.06
VRK3-202ENST00000377011 LTBP1Q14766 1721 aa15.45■□□□□ 0.06
VRK3-202ENST00000377011 TTLL11Q8NHH1 800 aa15.45■□□□□ 0.06
VRK3-202ENST00000377011 RRAGCQ9HB90 399 aa15.45■□□□□ 0.06
VRK3-202ENST00000377011 DDNO94850 711 aaPredicted RBP15.44■□□□□ 0.06
VRK3-202ENST00000377011 IARSP41252 1262 aaKnown RBP15.44■□□□□ 0.06
VRK3-202ENST00000377011 CTSWP56202 376 aa15.44■□□□□ 0.06
VRK3-202ENST00000377011 SOGA3Q5TF21 947 aa15.44■□□□□ 0.06
VRK3-202ENST00000377011 SP8Q8IXZ3 490 aa15.44■□□□□ 0.06
VRK3-202ENST00000377011 RTKN2Q8IZC4 609 aa15.44■□□□□ 0.06
VRK3-202ENST00000377011 BBOX1O75936 387 aa15.43■□□□□ 0.06
VRK3-202ENST00000377011 GPSM2P81274 684 aa15.43■□□□□ 0.06
VRK3-202ENST00000377011 KAZALD1Q96I82 304 aa15.43■□□□□ 0.06
VRK3-202ENST00000377011 PSMD1Q99460 953 aa15.43■□□□□ 0.06
VRK3-202ENST00000377011 SMC4Q9NTJ3 1288 aa15.43■□□□□ 0.06
VRK3-202ENST00000377011 GLTPD2A6NH11 291 aa15.43■□□□□ 0.06
VRK3-202ENST00000377011 FOXO4P98177 505 aa15.43■□□□□ 0.06
VRK3-202ENST00000377011 AOC3Q16853 763 aa15.43■□□□□ 0.06
VRK3-202ENST00000377011 SKAP1Q86WV1 359 aa15.43■□□□□ 0.06
VRK3-202ENST00000377011 DAXXQ9UER7 740 aaPredicted RBP15.43■□□□□ 0.06
VRK3-202ENST00000377011 NOB1Q9ULX3 412 aaKnown RBP15.43■□□□□ 0.06
VRK3-202ENST00000377011 NBPF7P0C2Y1 421 aaPredicted RBP15.42■□□□□ 0.06
VRK3-202ENST00000377011 RPS8P62241 208 aaKnown RBP15.42■□□□□ 0.06
VRK3-202ENST00000377011 POLLQ9UGP5 575 aa15.42■□□□□ 0.06
VRK3-202ENST00000377011 IGHDP01880 384 aa15.41■□□□□ 0.06
VRK3-202ENST00000377011 MPNDQ8N594 471 aa15.41■□□□□ 0.06
VRK3-202ENST00000377011 ALDH1L2Q3SY69 923 aa15.4■□□□□ 0.06
VRK3-202ENST00000377011 CCDC152Q4G0S7 254 aa15.4■□□□□ 0.06
VRK3-202ENST00000377011 DPP8Q6V1X1 898 aaPredicted RBP15.4■□□□□ 0.06
VRK3-202ENST00000377011 SUCLG2Q96I99 432 aa15.4■□□□□ 0.06
VRK3-202ENST00000377011 PLA2G12BQ9BX93 195 aa15.4■□□□□ 0.06
VRK3-202ENST00000377011 RTFDC1Q9BY42 306 aaPredicted RBP15.4■□□□□ 0.06
VRK3-202ENST00000377011 COG6Q9Y2V7 657 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms