RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CADPS2Q86UW7 1296 aa11.58□□□□□ -0.56
TRIM39-202ENST00000376659 MYD88Q99836 296 aa11.58□□□□□ -0.56
TRIM39-202ENST00000376659 TPCN1Q9ULQ1 816 aa11.58□□□□□ -0.56
TRIM39-202ENST00000376659 FPGT-TNNI3KV9GXZ4 949 aa11.58□□□□□ -0.56
TRIM39-202ENST00000376659 COL24A1Q17RW2 1714 aa11.58□□□□□ -0.56
TRIM39-202ENST00000376659 FOXP2O15409 715 aa11.58□□□□□ -0.56
TRIM39-202ENST00000376659 DDX58O95786 925 aaKnown RBP11.58□□□□□ -0.56
TRIM39-202ENST00000376659 RAPGEF4Q8WZA2 1011 aa11.58□□□□□ -0.56
TRIM39-202ENST00000376659 MTMR6Q9Y217 621 aa11.58□□□□□ -0.56
TRIM39-202ENST00000376659 TAF5LO75529 589 aa11.57□□□□□ -0.56
TRIM39-202ENST00000376659 SYT1P21579 422 aa11.57□□□□□ -0.56
TRIM39-202ENST00000376659 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
TRIM39-202ENST00000376659 FMNL2Q96PY5 1086 aa11.57□□□□□ -0.56
TRIM39-202ENST00000376659 RBM8AQ9Y5S9 174 aaKnown RBP11.57□□□□□ -0.56
TRIM39-202ENST00000376659 SH3TC1Q8TE82 1336 aa11.57□□□□□ -0.56
TRIM39-202ENST00000376659 ZSCAN22P10073 491 aaPredicted RBP11.57□□□□□ -0.56
TRIM39-202ENST00000376659 PIP4K2AP48426 406 aaPredicted RBP11.57□□□□□ -0.56
TRIM39-202ENST00000376659 ANKRD13DQ6ZTN6 518 aa11.57□□□□□ -0.56
TRIM39-202ENST00000376659 MYH14Q7Z406 1995 aaKnown RBP11.57□□□□□ -0.56
TRIM39-202ENST00000376659 MYL6BP14649 208 aa11.57□□□□□ -0.56
TRIM39-202ENST00000376659 CASTP20810 708 aaKnown RBP11.57□□□□□ -0.56
TRIM39-202ENST00000376659 NASPP49321 788 aaPredicted RBP11.57□□□□□ -0.56
TRIM39-202ENST00000376659 FGD1P98174 961 aa11.57□□□□□ -0.56
TRIM39-202ENST00000376659 HAUS7Q99871 368 aa11.57□□□□□ -0.56
TRIM39-202ENST00000376659 ATRNO75882 1429 aa11.57□□□□□ -0.56
TRIM39-202ENST00000376659 BCL9LQ86UU0 1499 aa11.57□□□□□ -0.56
TRIM39-202ENST00000376659 ERVV-2B6SEH9 535 aa11.56□□□□□ -0.56
TRIM39-202ENST00000376659 USP48Q86UV5 1035 aa11.56□□□□□ -0.56
TRIM39-202ENST00000376659 NLRP2Q9NX02 1062 aa11.56□□□□□ -0.56
TRIM39-202ENST00000376659 WDR33Q9C0J8 1336 aaKnown RBP11.56□□□□□ -0.56
TRIM39-202ENST00000376659 RBM10P98175 930 aaKnown RBP11.56□□□□□ -0.56
TRIM39-202ENST00000376659 TFCP2Q12800 502 aa11.56□□□□□ -0.56
TRIM39-202ENST00000376659 CCDC8Q9H0W5 538 aaPredicted RBP11.56□□□□□ -0.56
TRIM39-202ENST00000376659 ATF3P18847 181 aa11.56□□□□□ -0.56
TRIM39-202ENST00000376659 PRPF40BQ6NWY9 871 aaKnown RBP11.56□□□□□ -0.56
TRIM39-202ENST00000376659 TICAM2Q86XR7 235 aa11.56□□□□□ -0.56
TRIM39-202ENST00000376659 EDC3Q96F86 508 aaKnown RBP11.56□□□□□ -0.56
TRIM39-202ENST00000376659 SBF2Q86WG5 1849 aa11.56□□□□□ -0.56
TRIM39-202ENST00000376659 GOLGA6L22H0YM25 854 aa11.55□□□□□ -0.56
TRIM39-202ENST00000376659 F13A1P00488 732 aa11.55□□□□□ -0.56
TRIM39-202ENST00000376659 AIMP1Q12904 312 aaKnown RBP11.55□□□□□ -0.56
TRIM39-202ENST00000376659 AGXT2Q9BYV1 514 aa11.55□□□□□ -0.56
TRIM39-202ENST00000376659 ESPNB1AK53 854 aa11.55□□□□□ -0.56
TRIM39-202ENST00000376659 HS1BP3Q53T59 392 aa11.55□□□□□ -0.56
TRIM39-202ENST00000376659 GPR108Q9NPR9 543 aa11.55□□□□□ -0.56
TRIM39-202ENST00000376659 SALL1Q9NSC2 1324 aa11.55□□□□□ -0.56
TRIM39-202ENST00000376659 MBD3O95983 291 aa11.55□□□□□ -0.56
TRIM39-202ENST00000376659 CARD10Q9BWT7 1032 aa11.55□□□□□ -0.56
TRIM39-202ENST00000376659 BCL11BQ9C0K0 894 aaPredicted RBP11.55□□□□□ -0.56
TRIM39-202ENST00000376659 BCL9O00512 1426 aa11.54□□□□□ -0.56
TRIM39-202ENST00000376659 IFIT2P09913 472 aaKnown RBP11.54□□□□□ -0.56
TRIM39-202ENST00000376659 RPS6KB1P23443 525 aa11.54□□□□□ -0.56
TRIM39-202ENST00000376659 TTLL7Q6ZT98 887 aa11.54□□□□□ -0.56
TRIM39-202ENST00000376659 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
TRIM39-202ENST00000376659 ISCA1Q9BUE6 129 aa11.54□□□□□ -0.56
TRIM39-202ENST00000376659 HDAC5Q9UQL6 1122 aa11.54□□□□□ -0.56
TRIM39-202ENST00000376659 STX6O43752 255 aa11.54□□□□□ -0.56
TRIM39-202ENST00000376659 STOX1Q6ZVD7 989 aa11.54□□□□□ -0.56
TRIM39-202ENST00000376659 CNPY2Q9Y2B0 182 aa11.54□□□□□ -0.56
TRIM39-202ENST00000376659 SYCE3A1L190 88 aa11.53□□□□□ -0.56
TRIM39-202ENST00000376659 HIP1O00291 1037 aa11.53□□□□□ -0.56
TRIM39-202ENST00000376659 LARP6Q9BRS8 491 aaKnown RBP11.53□□□□□ -0.56
TRIM39-202ENST00000376659 JAKMIP1Q96N16 626 aaKnown RBP11.53□□□□□ -0.56
TRIM39-202ENST00000376659 SH2B1Q9NRF2 756 aaPredicted RBP11.53□□□□□ -0.56
TRIM39-202ENST00000376659 DIAPH3Q9NSV4 1193 aa11.53□□□□□ -0.56
TRIM39-202ENST00000376659 LAMB1P07942 1786 aa11.53□□□□□ -0.56
TRIM39-202ENST00000376659 NOL8Q76FK4 1167 aaKnown RBP11.53□□□□□ -0.56
TRIM39-202ENST00000376659 RUFY2Q8WXA3 655 aa11.53□□□□□ -0.56
TRIM39-202ENST00000376659 GPATCH3Q96I76 525 aa11.53□□□□□ -0.56
TRIM39-202ENST00000376659 ARXQ96QS3 562 aa11.53□□□□□ -0.56
TRIM39-202ENST00000376659 PDRG1Q9NUG6 133 aa11.53□□□□□ -0.56
TRIM39-202ENST00000376659 GJB2P29033 226 aa11.52□□□□□ -0.56
TRIM39-202ENST00000376659 UBE3BQ7Z3V4 1068 aa11.52□□□□□ -0.56
TRIM39-202ENST00000376659 PLA2G12BQ9BX93 195 aa11.52□□□□□ -0.56
TRIM39-202ENST00000376659 SIL1Q9H173 461 aa11.52□□□□□ -0.56
TRIM39-202ENST00000376659 ATG3Q9NT62 314 aa11.52□□□□□ -0.56
TRIM39-202ENST00000376659 LTBP4Q8N2S1 1624 aa11.52□□□□□ -0.56
TRIM39-202ENST00000376659 CIAO1O76071 339 aa11.52□□□□□ -0.57
TRIM39-202ENST00000376659 JARID2Q92833 1246 aaPredicted RBP11.52□□□□□ -0.57
TRIM39-202ENST00000376659 DBNDD2Q9BQY9 259 aa11.52□□□□□ -0.57
TRIM39-202ENST00000376659 BOLA2Q9H3K6 86 aa11.52□□□□□ -0.57
TRIM39-202ENST00000376659 GDPD2Q9HCC8 539 aa11.52□□□□□ -0.57
TRIM39-202ENST00000376659 FBXL16Q8N461 479 aa11.52□□□□□ -0.57
TRIM39-202ENST00000376659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRIM39-202ENST00000376659 ABCC12Q96J65 1359 aa11.51□□□□□ -0.57
TRIM39-202ENST00000376659 ELP1O95163 1332 aa11.51□□□□□ -0.57
TRIM39-202ENST00000376659 G3BP1Q13283 466 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRIM39-202ENST00000376659 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
TRIM39-202ENST00000376659 ZSCAN31Q96LW9 406 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-202ENST00000376659 NDUFB9Q9Y6M9 179 aa11.51□□□□□ -0.57
TRIM39-202ENST00000376659 MAST2Q6P0Q8 1798 aa11.51□□□□□ -0.57
TRIM39-202ENST00000376659 RBM43Q6ZSC3 357 aaKnown RBP11.51□□□□□ -0.57
TRIM39-202ENST00000376659 HMG20BQ9P0W2 317 aa11.51□□□□□ -0.57
TRIM39-202ENST00000376659 NOL7Q9UMY1 257 aaKnown RBP11.51□□□□□ -0.57
TRIM39-202ENST00000376659 A0A0G2JLW4 131 aa11.51□□□□□ -0.57
TRIM39-202ENST00000376659 FOXD4L5Q5VV16 416 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-202ENST00000376659 CCDC83Q8IWF9 413 aa11.51□□□□□ -0.57
TRIM39-202ENST00000376659 FOXD4L4Q8WXT5 416 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-202ENST00000376659 SLC4A9Q96Q91 983 aa11.51□□□□□ -0.57
TRIM39-202ENST00000376659 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms