RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 SH3TC1Q8TE82 1336 aa12.99□□□□□ -0.33
PDPN-203ENST00000376061 LHX8Q68G74 356 aa12.99□□□□□ -0.33
PDPN-203ENST00000376061 LMBR1LQ6UX01 489 aa12.99□□□□□ -0.33
PDPN-203ENST00000376061 CHD1LQ86WJ1 897 aa12.99□□□□□ -0.33
PDPN-203ENST00000376061 UTP14AQ9BVJ6 771 aaKnown RBP12.99□□□□□ -0.33
PDPN-203ENST00000376061 LNPKQ9C0E8 428 aa12.99□□□□□ -0.33
PDPN-203ENST00000376061 ANO8Q9HCE9 1232 aaPredicted RBP12.99□□□□□ -0.33
PDPN-203ENST00000376061 TFCP2L1Q9NZI6 479 aa12.99□□□□□ -0.33
PDPN-203ENST00000376061 SPEF2Q9C093 1822 aa12.99□□□□□ -0.33
PDPN-203ENST00000376061 FAM177BA6PVY3 158 aa12.98□□□□□ -0.33
PDPN-203ENST00000376061 IRS4O14654 1257 aaPredicted RBP12.98□□□□□ -0.33
PDPN-203ENST00000376061 PDE4AP27815 886 aa12.98□□□□□ -0.33
PDPN-203ENST00000376061 ANKRD45Q5TZF3 282 aa12.98□□□□□ -0.33
PDPN-203ENST00000376061 DEFB132Q7Z7B7 95 aa12.98□□□□□ -0.33
PDPN-203ENST00000376061 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
PDPN-203ENST00000376061 CARMIL3Q8ND23 1372 aa12.97□□□□□ -0.33
PDPN-203ENST00000376061 ABCC12Q96J65 1359 aa12.97□□□□□ -0.33
PDPN-203ENST00000376061 NRXN2Q9P2S2 1712 aa12.97□□□□□ -0.33
PDPN-203ENST00000376061 APBB1O00213 710 aa12.97□□□□□ -0.33
PDPN-203ENST00000376061 SURF6O75683 361 aaKnown RBP12.97□□□□□ -0.33
PDPN-203ENST00000376061 GABBR2O75899 941 aa12.97□□□□□ -0.33
PDPN-203ENST00000376061 GYS1P13807 737 aa12.97□□□□□ -0.33
PDPN-203ENST00000376061 RFX5P48382 616 aaPredicted RBP12.97□□□□□ -0.33
PDPN-203ENST00000376061 RGS3P49796 1198 aa12.97□□□□□ -0.33
PDPN-203ENST00000376061 CTSWP56202 376 aa12.97□□□□□ -0.33
PDPN-203ENST00000376061 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
PDPN-203ENST00000376061 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
PDPN-203ENST00000376061 PA2G4Q9UQ80 394 aaKnown RBP12.97□□□□□ -0.33
PDPN-203ENST00000376061 NOP58Q9Y2X3 529 aaKnown RBP12.97□□□□□ -0.33
PDPN-203ENST00000376061 PNPLA7Q6ZV29 1317 aa12.96□□□□□ -0.33
PDPN-203ENST00000376061 NFIXQ14938 502 aa12.96□□□□□ -0.33
PDPN-203ENST00000376061 FAM161AQ3B820 660 aa12.96□□□□□ -0.33
PDPN-203ENST00000376061 NUTM1Q86Y26 1132 aa12.96□□□□□ -0.33
PDPN-203ENST00000376061 SETDB2Q96T68 719 aa12.96□□□□□ -0.33
PDPN-203ENST00000376061 CHMP3Q9Y3E7 222 aa12.96□□□□□ -0.33
PDPN-203ENST00000376061 A0A1B0GUL6 1792 aa12.96□□□□□ -0.34
PDPN-203ENST00000376061 SMARCA5O60264 1052 aaPredicted RBP12.95□□□□□ -0.34
PDPN-203ENST00000376061 PDE8AO60658 829 aa12.95□□□□□ -0.34
PDPN-203ENST00000376061 CSF1RP07333 972 aa12.95□□□□□ -0.34
PDPN-203ENST00000376061 HCLS1P14317 486 aaPredicted RBP12.95□□□□□ -0.34
PDPN-203ENST00000376061 PTPN12Q05209 780 aaKnown RBP12.95□□□□□ -0.34
PDPN-203ENST00000376061 HSP90AB4PQ58FF6 505 aa12.95□□□□□ -0.34
PDPN-203ENST00000376061 COL23A1Q86Y22 540 aaPredicted RBP12.95□□□□□ -0.34
PDPN-203ENST00000376061 FLAD1Q8NFF5 587 aa12.95□□□□□ -0.34
PDPN-203ENST00000376061 KLHDC4Q8TBB5 520 aa12.95□□□□□ -0.34
PDPN-203ENST00000376061 LRRCC1Q9C099 1032 aa12.95□□□□□ -0.34
PDPN-203ENST00000376061 COPRSQ9NQ92 184 aa12.95□□□□□ -0.34
PDPN-203ENST00000376061 COL4A1P02462 1669 aa12.95□□□□□ -0.34
PDPN-203ENST00000376061 RAB11FIP3O75154 756 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 NBPF5PQ86XG9 351 aaPredicted RBP12.94□□□□□ -0.34
PDPN-203ENST00000376061 CCDC125Q86Z20 511 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 TTLL11Q8NHH1 800 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 NYXQ9GZU5 481 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 STK32BQ9NY57 414 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 RIC1Q4ADV7 1423 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 ANKRD31Q8N7Z5 1873 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 HSP90B1P14625 803 aaKnown RBP12.94□□□□□ -0.34
PDPN-203ENST00000376061 OS9Q13438 667 aaPredicted RBP12.94□□□□□ -0.34
PDPN-203ENST00000376061 SLC15A2Q16348 729 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 ERC1Q8IUD2 1116 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 RHPN1Q8TCX5 695 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 KIF1BPQ96EK5 621 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 CCDC85AQ96PX6 553 aaPredicted RBP12.94□□□□□ -0.34
PDPN-203ENST00000376061 SIL1Q9H173 461 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 GREM2Q9H772 168 aa12.94□□□□□ -0.34
PDPN-203ENST00000376061 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
PDPN-203ENST00000376061 TAF1P21675 1872 aa12.93□□□□□ -0.34
PDPN-203ENST00000376061 DDR1Q08345 913 aa12.93□□□□□ -0.34
PDPN-203ENST00000376061 OTUD7AQ8TE49 926 aaPredicted RBP12.93□□□□□ -0.34
PDPN-203ENST00000376061 SASH1O94885 1247 aa12.92□□□□□ -0.34
PDPN-203ENST00000376061 TM4SF1P30408 202 aa12.92□□□□□ -0.34
PDPN-203ENST00000376061 G3BP1Q13283 466 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDPN-203ENST00000376061 CCDC57Q2TAC2 916 aa12.92□□□□□ -0.34
PDPN-203ENST00000376061 SLC10A5Q5PT55 438 aa12.92□□□□□ -0.34
PDPN-203ENST00000376061 C3orf67Q6ZVT6 689 aa12.92□□□□□ -0.34
PDPN-203ENST00000376061 ZNF594Q96JF6 807 aaPredicted RBP12.92□□□□□ -0.34
PDPN-203ENST00000376061 IL1RAPL2Q9NP60 686 aa12.92□□□□□ -0.34
PDPN-203ENST00000376061 SALL3Q9BXA9 1300 aa12.91□□□□□ -0.34
PDPN-203ENST00000376061 POLRMTO00411 1230 aaKnown RBP12.91□□□□□ -0.34
PDPN-203ENST00000376061 ITGA6P23229 1130 aa12.91□□□□□ -0.34
PDPN-203ENST00000376061 GTF2E1P29083 439 aaPredicted RBP12.91□□□□□ -0.34
PDPN-203ENST00000376061 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
PDPN-203ENST00000376061 IFIT5Q13325 482 aaKnown RBP12.91□□□□□ -0.34
PDPN-203ENST00000376061 TPTE2Q6XPS3 522 aa12.91□□□□□ -0.34
PDPN-203ENST00000376061 C16orf71Q8IYS4 520 aaPredicted RBP12.91□□□□□ -0.34
PDPN-203ENST00000376061 CNBD1Q8NA66 436 aa12.91□□□□□ -0.34
PDPN-203ENST00000376061 BCL11AQ9H165 835 aa12.91□□□□□ -0.34
PDPN-203ENST00000376061 COL11A2P13942 1736 aaPredicted RBP12.91□□□□□ -0.34
PDPN-203ENST00000376061 ARAP2Q8WZ64 1704 aa12.91□□□□□ -0.34
PDPN-203ENST00000376061 ANKRD18BA2A2Z9 1011 aa12.9□□□□□ -0.34
PDPN-203ENST00000376061 EYA2O00167 538 aa12.9□□□□□ -0.34
PDPN-203ENST00000376061 CIAO1O76071 339 aa12.9□□□□□ -0.34
PDPN-203ENST00000376061 CCDC152Q4G0S7 254 aa12.9□□□□□ -0.34
PDPN-203ENST00000376061 PRR5LQ6MZQ0 368 aa12.9□□□□□ -0.34
PDPN-203ENST00000376061 ATG9AQ7Z3C6 839 aa12.9□□□□□ -0.34
PDPN-203ENST00000376061 PLEKHM2Q8IWE5 1019 aa12.9□□□□□ -0.34
PDPN-203ENST00000376061 CCDC24Q8N4L8 307 aa12.9□□□□□ -0.34
PDPN-203ENST00000376061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms