RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 HSPA6P17066 643 aa25.55■■□□□ 1.68
C6orf48-205ENST00000375640 SUPT20HQ8NEM7 779 aa25.55■■□□□ 1.68
C6orf48-205ENST00000375640 RTFDC1Q9BY42 306 aaPredicted RBP25.55■■□□□ 1.68
C6orf48-205ENST00000375640 NEURL1BA8MQ27 555 aa25.54■■□□□ 1.68
C6orf48-205ENST00000375640 FSTL1Q12841 308 aa25.54■■□□□ 1.68
C6orf48-205ENST00000375640 MPNDQ8N594 471 aa25.54■■□□□ 1.68
C6orf48-205ENST00000375640 ANKRD36CQ5JPF3 1778 aa25.54■■□□□ 1.68
C6orf48-205ENST00000375640 DPP8Q6V1X1 898 aaPredicted RBP25.53■■□□□ 1.68
C6orf48-205ENST00000375640 SLC51AQ86UW1 340 aa25.53■■□□□ 1.68
C6orf48-205ENST00000375640 LARGE2Q8N3Y3 721 aa25.53■■□□□ 1.68
C6orf48-205ENST00000375640 DNAAF4Q8WXU2 420 aa25.53■■□□□ 1.68
C6orf48-205ENST00000375640 JARID2Q92833 1246 aaPredicted RBP25.53■■□□□ 1.68
C6orf48-205ENST00000375640 CELF1Q92879 486 aaKnown RBP25.53■■□□□ 1.68
C6orf48-205ENST00000375640 CDHR2Q9BYE9 1310 aa25.53■■□□□ 1.68
C6orf48-205ENST00000375640 RPS8P62241 208 aaKnown RBP25.52■■□□□ 1.68
C6orf48-205ENST00000375640 CWF19L2Q2TBE0 894 aaKnown RBP25.52■■□□□ 1.68
C6orf48-205ENST00000375640 CCDC152Q4G0S7 254 aa25.52■■□□□ 1.68
C6orf48-205ENST00000375640 L3MBTL3Q96JM7 780 aaPredicted RBP25.51■■□□□ 1.67
C6orf48-205ENST00000375640 H7C1W4 665 aa25.5■■□□□ 1.67
C6orf48-205ENST00000375640 PPIP5K2O43314 1243 aa25.5■■□□□ 1.67
C6orf48-205ENST00000375640 EIF6P56537 245 aaKnown RBP25.5■■□□□ 1.67
C6orf48-205ENST00000375640 SLFN5Q08AF3 891 aa25.5■■□□□ 1.67
C6orf48-205ENST00000375640 SMC1BQ8NDV3 1235 aa25.5■■□□□ 1.67
C6orf48-205ENST00000375640 LINS1Q8NG48 757 aa25.5■■□□□ 1.67
C6orf48-205ENST00000375640 ZNF541Q9H0D2 1346 aa25.49■■□□□ 1.67
C6orf48-205ENST00000375640 IQCA1LA6NCM1 817 aa25.49■■□□□ 1.67
C6orf48-205ENST00000375640 GCKRQ14397 625 aa25.49■■□□□ 1.67
C6orf48-205ENST00000375640 DIEXFQ68CQ4 756 aaKnown RBP25.48■■□□□ 1.67
C6orf48-205ENST00000375640 NIM1KQ8IY84 436 aa25.48■■□□□ 1.67
C6orf48-205ENST00000375640 AOC3Q16853 763 aa25.47■■□□□ 1.67
C6orf48-205ENST00000375640 GPC2Q8N158 579 aa25.47■■□□□ 1.67
C6orf48-205ENST00000375640 SEC31BQ9NQW1 1179 aa25.47■■□□□ 1.67
C6orf48-205ENST00000375640 KIAA2012Q0VF49 1180 aa25.46■■□□□ 1.67
C6orf48-205ENST00000375640 NSFL1CQ9UNZ2 370 aaKnown RBP25.46■■□□□ 1.67
C6orf48-205ENST00000375640 CTSWP56202 376 aa25.45■■□□□ 1.66
C6orf48-205ENST00000375640 UBE3BQ7Z3V4 1068 aa25.45■■□□□ 1.66
C6orf48-205ENST00000375640 TTLL11Q8NHH1 800 aa25.45■■□□□ 1.66
C6orf48-205ENST00000375640 CACNA1SQ13698 1873 aa25.45■■□□□ 1.66
C6orf48-205ENST00000375640 F6X3S4 739 aa25.44■■□□□ 1.66
C6orf48-205ENST00000375640 APLP1P51693 650 aa25.44■■□□□ 1.66
C6orf48-205ENST00000375640 BEND3Q5T5X7 828 aa25.44■■□□□ 1.66
C6orf48-205ENST00000375640 CCDC85AQ96PX6 553 aaPredicted RBP25.44■■□□□ 1.66
C6orf48-205ENST00000375640 PLA2G12BQ9BX93 195 aa25.44■■□□□ 1.66
C6orf48-205ENST00000375640 ZNRF3Q9ULT6 936 aa25.44■■□□□ 1.66
C6orf48-205ENST00000375640 TRMT2AQ8IZ69 625 aaKnown RBP25.43■■□□□ 1.66
C6orf48-205ENST00000375640 CDCA7LQ96GN5 454 aa25.43■■□□□ 1.66
C6orf48-205ENST00000375640 TAF1DQ9H5J8 278 aaPredicted RBP25.43■■□□□ 1.66
C6orf48-205ENST00000375640 HACL1Q9UJ83 578 aa25.43■■□□□ 1.66
C6orf48-205ENST00000375640 TIAM2Q8IVF5 1701 aa25.43■■□□□ 1.66
C6orf48-205ENST00000375640 CASP7P55210 303 aa25.42■■□□□ 1.66
C6orf48-205ENST00000375640 GPSM2P81274 684 aa25.42■■□□□ 1.66
C6orf48-205ENST00000375640 ANKRD18AQ8IVF6 992 aa25.42■■□□□ 1.66
C6orf48-205ENST00000375640 CDC5LQ99459 802 aaKnown RBP25.42■■□□□ 1.66
C6orf48-205ENST00000375640 WDR90Q96KV7 1748 aa25.42■■□□□ 1.66
C6orf48-205ENST00000375640 WASHC4Q2M389 1173 aa25.41■■□□□ 1.66
C6orf48-205ENST00000375640 MIER1Q8N108 512 aa25.41■■□□□ 1.66
C6orf48-205ENST00000375640 PODXL2Q9NZ53 605 aa25.41■■□□□ 1.66
C6orf48-205ENST00000375640 GJA3Q9Y6H8 435 aa25.41■■□□□ 1.66
C6orf48-205ENST00000375640 DICER1Q9UPY3 1922 aaKnown RBP25.41■■□□□ 1.66
C6orf48-205ENST00000375640 C6orf229H3BNL8 230 aa25.4■■□□□ 1.66
C6orf48-205ENST00000375640 MRPL50Q8N5N7 158 aaKnown RBP25.4■■□□□ 1.66
C6orf48-205ENST00000375640 POLLQ9UGP5 575 aa25.4■■□□□ 1.66
C6orf48-205ENST00000375640 CCDC88AQ3V6T2 1871 aa25.4■■□□□ 1.66
C6orf48-205ENST00000375640 TBC1D16Q8TBP0 767 aa25.39■■□□□ 1.66
C6orf48-205ENST00000375640 EYA3Q99504 573 aa25.39■■□□□ 1.66
C6orf48-205ENST00000375640 GREM2Q9H772 168 aa25.39■■□□□ 1.66
C6orf48-205ENST00000375640 DDX60Q8IY21 1712 aaKnown RBP25.39■■□□□ 1.65
C6orf48-205ENST00000375640 RTL9Q8NET4 1388 aa25.39■■□□□ 1.65
C6orf48-205ENST00000375640 COL4A5P29400 1685 aa25.39■■□□□ 1.65
C6orf48-205ENST00000375640 CSF1RP07333 972 aa25.38■■□□□ 1.65
C6orf48-205ENST00000375640 EPHX2P34913 555 aa25.38■■□□□ 1.65
C6orf48-205ENST00000375640 CXCL9Q07325 125 aa25.38■■□□□ 1.65
C6orf48-205ENST00000375640 CHADLQ6NUI6 762 aa25.38■■□□□ 1.65
C6orf48-205ENST00000375640 PNMA8AQ86V59 439 aaPredicted RBP25.38■■□□□ 1.65
C6orf48-205ENST00000375640 ALDH1L1O75891 902 aa25.37■■□□□ 1.65
C6orf48-205ENST00000375640 LDHDQ86WU2 507 aa25.37■■□□□ 1.65
C6orf48-205ENST00000375640 SSH1Q8WYL5 1049 aa25.37■■□□□ 1.65
C6orf48-205ENST00000375640 BSDC1Q9NW68 430 aaPredicted RBP25.37■■□□□ 1.65
C6orf48-205ENST00000375640 ANKIB1Q9P2G1 1089 aa25.37■■□□□ 1.65
C6orf48-205ENST00000375640 LAMB2P55268 1798 aa25.36■■□□□ 1.65
C6orf48-205ENST00000375640 CT47B1P0C2W7 299 aaPredicted RBP25.36■■□□□ 1.65
C6orf48-205ENST00000375640 LMOD1P29536 600 aaPredicted RBP25.36■■□□□ 1.65
C6orf48-205ENST00000375640 TNIP1Q15025 636 aa25.36■■□□□ 1.65
C6orf48-205ENST00000375640 ALDH1L2Q3SY69 923 aa25.36■■□□□ 1.65
C6orf48-205ENST00000375640 SRCIN1Q9C0H9 1055 aa25.36■■□□□ 1.65
C6orf48-205ENST00000375640 GGA1Q9UJY5 639 aa25.36■■□□□ 1.65
C6orf48-205ENST00000375640 POTEIP0CG38 1075 aa25.35■■□□□ 1.65
C6orf48-205ENST00000375640 POTEJP0CG39 1038 aa25.35■■□□□ 1.65
C6orf48-205ENST00000375640 CIAPIN1Q6FI81 312 aa25.35■■□□□ 1.65
C6orf48-205ENST00000375640 SLC4A10Q6U841 1118 aa25.35■■□□□ 1.65
C6orf48-205ENST00000375640 ZC3H12CQ9C0D7 883 aaKnown RBP25.35■■□□□ 1.65
C6orf48-205ENST00000375640 PTPRCP08575 1304 aa25.35■■□□□ 1.65
C6orf48-205ENST00000375640 GRM8O00222 908 aa25.34■■□□□ 1.65
C6orf48-205ENST00000375640 RIMBP2O15034 1052 aa25.34■■□□□ 1.65
C6orf48-205ENST00000375640 SCNN1DP51172 638 aa25.34■■□□□ 1.65
C6orf48-205ENST00000375640 C9orf78Q9NZ63 289 aaPredicted RBP25.34■■□□□ 1.65
C6orf48-205ENST00000375640 ITGA6P23229 1130 aa25.33■■□□□ 1.65
C6orf48-205ENST00000375640 IGHMBP2P38935 993 aaKnown RBP25.33■■□□□ 1.65
C6orf48-205ENST00000375640 EAPPQ56P03 285 aaPredicted RBP25.33■■□□□ 1.65
C6orf48-205ENST00000375640 MINPP1Q9UNW1 487 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms