RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TDO2P48775 406 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 EHMT1Q9H9B1 1298 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 BRD3Q15059 726 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 CCDC129Q6ZRS4 1044 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 ESYT1Q9BSJ8 1104 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 STIM2Q9P246 746 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 KIF3CO14782 793 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 BTBD11A6QL63 1104 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 SF3B2Q13435 895 aaKnown RBP11.63□□□□□ -0.55
PTCH1-204ENST00000375290 KRT23Q9C075 422 aa11.63□□□□□ -0.55
PTCH1-204ENST00000375290 TNNC1P63316 161 aa11.62□□□□□ -0.55
PTCH1-204ENST00000375290 STK3Q13188 491 aa11.62□□□□□ -0.55
PTCH1-204ENST00000375290 PSMA7O14818 248 aa11.62□□□□□ -0.55
PTCH1-204ENST00000375290 IARSP41252 1262 aaKnown RBP11.62□□□□□ -0.55
PTCH1-204ENST00000375290 RNF187Q5TA31 235 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-204ENST00000375290 SAMD15Q9P1V8 674 aa11.62□□□□□ -0.55
PTCH1-204ENST00000375290 RTL1A6NKG5 1358 aa11.62□□□□□ -0.55
PTCH1-204ENST00000375290 ARHGAP6O43182 974 aa11.62□□□□□ -0.55
PTCH1-204ENST00000375290 CATIPQ7Z7H3 387 aa11.62□□□□□ -0.55
PTCH1-204ENST00000375290 ABTB2Q8N961 1025 aa11.62□□□□□ -0.55
PTCH1-204ENST00000375290 TEX13AQ9BXU3 409 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-204ENST00000375290 GPR161Q8N6U8 529 aaKnown RBP11.62□□□□□ -0.55
PTCH1-204ENST00000375290 FLIIQ13045 1269 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 USP48Q86UV5 1035 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 NAPBQ9H115 298 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 GSTTP1A0A1W2PQM5 241 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 APBA1Q02410 837 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 BICDL1Q6ZP65 573 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 CALM1P0DP23 149 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 CALM2P0DP24 149 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 CALM3P0DP25 149 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 FCHSD1Q86WN1 690 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 TICAM2Q86XR7 235 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 CCDC51Q96ER9 411 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 HLTFQ14527 1009 aaKnown RBP eCLIP11.61□□□□□ -0.55
PTCH1-204ENST00000375290 RUFY4Q6ZNE9 571 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 DHX37Q8IY37 1157 aaKnown RBP11.61□□□□□ -0.55
PTCH1-204ENST00000375290 NUCKS1Q9H1E3 243 aaKnown RBP11.61□□□□□ -0.55
PTCH1-204ENST00000375290 RAI14Q9P0K7 980 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 ALDH3A1P30838 453 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 CCDC184Q52MB2 194 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 FBF1Q8TES7 1133 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 IQSEC3Q9UPP2 1182 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-204ENST00000375290 PRIM1P49642 420 aaKnown RBP11.61□□□□□ -0.55
PTCH1-204ENST00000375290 ADGRL2O95490 1459 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 CCDC194A0A1B0GVG4 234 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 RASSF2P50749 326 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 CKAP2LQ8IYA6 745 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 ZHX1Q9UKY1 873 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-204ENST00000375290 SETDB1Q15047 1291 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 C20orf194Q5TEA3 1177 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 TRIM7Q9C029 511 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 STK24Q9Y6E0 443 aa11.61□□□□□ -0.55
PTCH1-204ENST00000375290 ALDH1L1O75891 902 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 PDE1AP54750 535 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 THEMISQ8N1K5 641 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-204ENST00000375290 CABP1Q9NZU7 370 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 REREQ9P2R6 1566 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 GNAQP50148 359 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 CCDC186Q7Z3E2 898 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 IKBKGQ9Y6K9 419 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 FAM160A1Q05DH4 1040 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 PAIP2Q9BPZ3 127 aaKnown RBP11.6□□□□□ -0.55
PTCH1-204ENST00000375290 EXOC6BQ9Y2D4 811 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 ADGRL1O94910 1474 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 LACTBP83111 547 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-204ENST00000375290 NUP58Q9BVL2 599 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 DNAI1Q9UI46 699 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 TRAPPC8Q9Y2L5 1435 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 GNAT2P19087 354 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 MTRF1LQ9UGC7 380 aaKnown RBP11.6□□□□□ -0.55
PTCH1-204ENST00000375290 GOLGA8BA8MQT2 603 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 BUB1BO60566 1050 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-204ENST00000375290 SEPT6Q14141 434 aa11.6□□□□□ -0.55
PTCH1-204ENST00000375290 VWA3BQ502W6 1294 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTCH1-204ENST00000375290 ANKRD62A6NC57 917 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 N4BP3O15049 544 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 AFAP1L1Q8TED9 768 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 PPIP5K1Q6PFW1 1433 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 GBP1P32455 592 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 MTMR3Q13615 1198 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 SMC6Q96SB8 1091 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 ARHGEF11O15085 1522 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 VCXQ9H320 206 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 CALML3P27482 149 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 RSPH14Q9UHP6 348 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 SLC8A1P32418 973 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 LMNTD2Q8IXW0 634 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 LUC7L2Q9Y383 392 aaKnown RBP11.59□□□□□ -0.55
PTCH1-204ENST00000375290 FYB1O15117 783 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 MAATS1Q7Z4T9 603 aa11.59□□□□□ -0.55
PTCH1-204ENST00000375290 CLASP1Q7Z460 1538 aa11.58□□□□□ -0.55
PTCH1-204ENST00000375290 LUC7L3O95232 432 aaKnown RBP11.58□□□□□ -0.55
PTCH1-204ENST00000375290 ARID4AP29374 1257 aaPredicted RBP11.58□□□□□ -0.55
PTCH1-204ENST00000375290 SLMAPQ14BN4 828 aa11.58□□□□□ -0.55
PTCH1-204ENST00000375290 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.58□□□□□ -0.55
PTCH1-204ENST00000375290 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-204ENST00000375290 SDSP20132 328 aa11.58□□□□□ -0.56
PTCH1-204ENST00000375290 IGHMBP2P38935 993 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms