RNA–Protein interactions for RNA: ENST00000375244.7

TNXB-201, Transcript of tenascin XB, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNXB, Length 13,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-201ENST00000375244 CTAGE8P0CG41 777 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 TRMT1LQ7Z2T5 733 aaKnown RBP12.13□□□□□ -0.47
TNXB-201ENST00000375244 CTAGE6Q86UF2 777 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 CTAGE4Q8IX94 777 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 GDPD2Q9HCC8 539 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 KRT13P13646 458 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 KCNH5Q8NCM2 988 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 MMRN2Q9H8L6 949 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 SLFN5Q08AF3 891 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 SLC52A1Q9NWF4 448 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 PTPRCP08575 1304 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 CCDC63Q8NA47 563 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 GOLGA1Q92805 767 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 JAKMIP2Q96AA8 810 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 TBC1D2Q9BYX2 928 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 KAT6AQ92794 2004 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 PIP4K2BP78356 416 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 SPAG5Q96R06 1193 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 CEP83Q9Y592 693 aa12.13□□□□□ -0.47
TNXB-201ENST00000375244 CAMSAP2Q08AD1 1489 aa12.12□□□□□ -0.47
TNXB-201ENST00000375244 TFIP11Q9UBB9 837 aaKnown RBP12.12□□□□□ -0.47
TNXB-201ENST00000375244 EPRSP07814 1512 aaKnown RBP12.12□□□□□ -0.47
TNXB-201ENST00000375244 RNF216Q9NWF9 866 aaPredicted RBP12.12□□□□□ -0.47
TNXB-201ENST00000375244 PANK2Q9BZ23 570 aa12.12□□□□□ -0.47
TNXB-201ENST00000375244 MRVI1Q9Y6F6 885 aa12.12□□□□□ -0.47
TNXB-201ENST00000375244 TSPY2A6NKD2 308 aa12.12□□□□□ -0.47
TNXB-201ENST00000375244 IARSP41252 1262 aaKnown RBP12.12□□□□□ -0.47
TNXB-201ENST00000375244 STIM2Q9P246 746 aa12.12□□□□□ -0.47
TNXB-201ENST00000375244 EEF2P13639 858 aaKnown RBP12.12□□□□□ -0.47
TNXB-201ENST00000375244 CCDC141Q6ZP82 1450 aa12.12□□□□□ -0.47
TNXB-201ENST00000375244 GMNNO75496 209 aa12.12□□□□□ -0.47
TNXB-201ENST00000375244 ZSCAN16Q9H4T2 348 aaPredicted RBP12.12□□□□□ -0.47
TNXB-201ENST00000375244 HLA-DOAP06340 250 aa12.12□□□□□ -0.47
TNXB-201ENST00000375244 WDR66Q8TBY9 1149 aa12.12□□□□□ -0.47
TNXB-201ENST00000375244 SRRTQ9BXP5 876 aaKnown RBP12.12□□□□□ -0.47
TNXB-201ENST00000375244 NCOA7Q8NI08 942 aa12.12□□□□□ -0.47
TNXB-201ENST00000375244 LMBR1Q8WVP7 490 aa12.12□□□□□ -0.47
TNXB-201ENST00000375244 CCDC14Q49A88 953 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 ISM2Q6H9L7 571 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 RGS22Q8NE09 1264 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 SSH1Q8WYL5 1049 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 SELENOSQ9BQE4 189 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 PTCD1O75127 700 aaKnown RBP12.11□□□□□ -0.47
TNXB-201ENST00000375244 BMP15O95972 392 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 ANKLE2Q86XL3 938 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 SMC1BQ8NDV3 1235 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 CCDC8Q9H0W5 538 aaPredicted RBP12.11□□□□□ -0.47
TNXB-201ENST00000375244 RRAGBQ5VZM2 374 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 RBM27Q9P2N5 1060 aaKnown RBP12.11□□□□□ -0.47
TNXB-201ENST00000375244 CEP57Q86XR8 500 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 LARP6Q9BRS8 491 aaKnown RBP12.11□□□□□ -0.47
TNXB-201ENST00000375244 MKRN1Q9UHC7 482 aaKnown RBP12.11□□□□□ -0.47
TNXB-201ENST00000375244 HCLS1P14317 486 aaPredicted RBP12.11□□□□□ -0.47
TNXB-201ENST00000375244 MAP3K9P80192 1104 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 CDC5LQ99459 802 aaKnown RBP12.11□□□□□ -0.47
TNXB-201ENST00000375244 THUMPD2Q9BTF0 503 aaKnown RBP12.11□□□□□ -0.47
TNXB-201ENST00000375244 CAPZA3Q96KX2 299 aa12.11□□□□□ -0.47
TNXB-201ENST00000375244 SLU7O95391 586 aaKnown RBP12.1□□□□□ -0.47
TNXB-201ENST00000375244 SH3BP5O60239 455 aa12.1□□□□□ -0.47
TNXB-201ENST00000375244 SKILP12757 684 aa12.1□□□□□ -0.47
TNXB-201ENST00000375244 ALDH3A1P30838 453 aa12.1□□□□□ -0.47
TNXB-201ENST00000375244 TRMT112Q9UI30 125 aaKnown RBP12.1□□□□□ -0.47
TNXB-201ENST00000375244 NDC80O14777 642 aa12.1□□□□□ -0.47
TNXB-201ENST00000375244 PAXIP1Q6ZW49 1069 aaPredicted RBP12.1□□□□□ -0.47
TNXB-201ENST00000375244 TBC1D9Q6ZT07 1266 aa12.1□□□□□ -0.47
TNXB-201ENST00000375244 RPUSD2Q8IZ73 545 aaKnown RBP12.1□□□□□ -0.47
TNXB-201ENST00000375244 HAND2P61296 217 aa12.1□□□□□ -0.47
TNXB-201ENST00000375244 ATP2A2P16615 1042 aaKnown RBP12.1□□□□□ -0.47
TNXB-201ENST00000375244 EBAG9O00559 213 aa12.1□□□□□ -0.47
TNXB-201ENST00000375244 TSGA10Q9BZW7 698 aa12.1□□□□□ -0.47
TNXB-201ENST00000375244 PHACTR2O75167 634 aa12.1□□□□□ -0.47
TNXB-201ENST00000375244 LRSAM1Q6UWE0 723 aa12.1□□□□□ -0.47
TNXB-201ENST00000375244 CIB2O75838 187 aa12.1□□□□□ -0.47
TNXB-201ENST00000375244 PSMA7O14818 248 aa12.1□□□□□ -0.47
TNXB-201ENST00000375244 URB1O60287 2271 aaKnown RBP12.09□□□□□ -0.47
TNXB-201ENST00000375244 CA8P35219 290 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 TUBB4BP68371 445 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 ASIC1P78348 528 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 KRT23Q9C075 422 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 RTN1Q16799 776 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 SAMD15Q9P1V8 674 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 NEK1Q96PY6 1258 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 DNAI1Q9UI46 699 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 MICAL3Q7RTP6 2002 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 TIAM1Q13009 1591 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 IMPG2Q9BZV3 1241 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 DHX29Q7Z478 1369 aaKnown RBP12.09□□□□□ -0.47
TNXB-201ENST00000375244 BAZ2BQ9UIF8 2168 aaKnown RBP12.09□□□□□ -0.47
TNXB-201ENST00000375244 ECHDC1Q9NTX5 307 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 CWC25Q9NXE8 425 aaPredicted RBP12.09□□□□□ -0.47
TNXB-201ENST00000375244 TTC31Q49AM3 519 aaPredicted RBP12.09□□□□□ -0.47
TNXB-201ENST00000375244 CCDC50Q8IVM0 306 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 C6orf229H3BNL8 230 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 CFAP157Q5JU67 520 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 TMEM110-MUSTN1A8MSY1 372 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 SYT1P21579 422 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 CABP5Q9NP86 173 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 TXNDC16Q9P2K2 825 aa12.09□□□□□ -0.47
TNXB-201ENST00000375244 SNX16P57768 344 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms