RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ELL2O00472 640 aaPredicted RBP10.79□□□□□ -0.68
UBR4-201ENST00000375218 WASHC5Q12768 1159 aa10.79□□□□□ -0.68
UBR4-201ENST00000375218 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.79□□□□□ -0.68
UBR4-201ENST00000375218 CARD11Q9BXL7 1154 aa10.79□□□□□ -0.68
UBR4-201ENST00000375218 TMCC3Q9ULS5 477 aa10.79□□□□□ -0.68
UBR4-201ENST00000375218 TECPR2O15040 1411 aa10.79□□□□□ -0.68
UBR4-201ENST00000375218 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.79□□□□□ -0.68
UBR4-201ENST00000375218 UBE2Q1Q7Z7E8 422 aa10.79□□□□□ -0.68
UBR4-201ENST00000375218 CLASRPQ8N2M8 674 aaKnown RBP10.79□□□□□ -0.68
UBR4-201ENST00000375218 WAPLQ7Z5K2 1190 aa10.78□□□□□ -0.68
UBR4-201ENST00000375218 LCA5Q86VQ0 697 aa10.78□□□□□ -0.68
UBR4-201ENST00000375218 NBPF3Q9H094 633 aa10.78□□□□□ -0.68
UBR4-201ENST00000375218 SETD1BQ9UPS6 1966 aaKnown RBP10.78□□□□□ -0.68
UBR4-201ENST00000375218 ABCD1P33897 745 aa10.78□□□□□ -0.68
UBR4-201ENST00000375218 WASHC2CQ9Y4E1 1318 aa10.78□□□□□ -0.68
UBR4-201ENST00000375218 RNASEH2AO75792 299 aaKnown RBP10.78□□□□□ -0.68
UBR4-201ENST00000375218 PPP1R18Q6NYC8 613 aa10.78□□□□□ -0.68
UBR4-201ENST00000375218 RGPD2P0DJD1 1756 aa10.78□□□□□ -0.68
UBR4-201ENST00000375218 ZC3H12AQ5D1E8 599 aaKnown RBP10.77□□□□□ -0.68
UBR4-201ENST00000375218 ZNF467Q7Z7K2 595 aaPredicted RBP10.77□□□□□ -0.68
UBR4-201ENST00000375218 SUPT16HQ9Y5B9 1047 aaKnown RBP10.77□□□□□ -0.68
UBR4-201ENST00000375218 NBPF7P0C2Y1 421 aaPredicted RBP10.77□□□□□ -0.69
UBR4-201ENST00000375218 RBP3P10745 1247 aa10.77□□□□□ -0.69
UBR4-201ENST00000375218 NFE2L2Q16236 605 aa10.77□□□□□ -0.69
UBR4-201ENST00000375218 SNX32Q86XE0 403 aa10.77□□□□□ -0.69
UBR4-201ENST00000375218 RELL1Q8IUW5 271 aa10.77□□□□□ -0.69
UBR4-201ENST00000375218 IFT88Q13099 833 aa10.77□□□□□ -0.69
UBR4-201ENST00000375218 VMP1Q96GC9 406 aa10.77□□□□□ -0.69
UBR4-201ENST00000375218 VIRMAQ69YN4 1812 aaKnown RBP10.77□□□□□ -0.69
UBR4-201ENST00000375218 ATG7O95352 703 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 ADAMTS19Q8TE59 1207 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 FAM210AQ96ND0 272 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 TMEM63CQ9P1W3 806 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 THRAP3Q9Y2W1 955 aaKnown RBP10.76□□□□□ -0.69
UBR4-201ENST00000375218 IQSEC2Q5JU85 1478 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 HELQQ8TDG4 1101 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 ROBO2Q9HCK4 1378 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 FMN2Q9NZ56 1722 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 ATP7BP35670 1465 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 TPM3P06753 285 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 TRIM29Q14134 588 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 SIM2Q14190 667 aaPredicted RBP10.76□□□□□ -0.69
UBR4-201ENST00000375218 SLF2Q8IX21 1173 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 RABL2AQ9UBK7 228 aaPredicted RBP10.76□□□□□ -0.69
UBR4-201ENST00000375218 SYNRGQ9UMZ2 1314 aa10.76□□□□□ -0.69
UBR4-201ENST00000375218 YTHDC2Q9H6S0 1430 aaKnown RBP10.76□□□□□ -0.69
UBR4-201ENST00000375218 ZNF131P52739 623 aa10.75□□□□□ -0.69
UBR4-201ENST00000375218 PCGF5Q86SE9 256 aa10.75□□□□□ -0.69
UBR4-201ENST00000375218 FERMT3Q86UX7 667 aa10.75□□□□□ -0.69
UBR4-201ENST00000375218 FAM161BQ96MY7 647 aa10.75□□□□□ -0.69
UBR4-201ENST00000375218 ZNF219Q9P2Y4 722 aaPredicted RBP10.75□□□□□ -0.69
UBR4-201ENST00000375218 TNNT1P13805 278 aa10.75□□□□□ -0.69
UBR4-201ENST00000375218 PEX19P40855 299 aa10.75□□□□□ -0.69
UBR4-201ENST00000375218 RBM5P52756 815 aaKnown RBP eCLIP10.75□□□□□ -0.69
UBR4-201ENST00000375218 DUSP9Q99956 384 aaKnown RBP10.75□□□□□ -0.69
UBR4-201ENST00000375218 RABGAP1Q9Y3P9 1069 aa10.75□□□□□ -0.69
UBR4-201ENST00000375218 CBLBQ13191 982 aa10.75□□□□□ -0.69
UBR4-201ENST00000375218 PHC3Q8NDX5 983 aa10.75□□□□□ -0.69
UBR4-201ENST00000375218 TBC1D31Q96DN5 1066 aa10.75□□□□□ -0.69
UBR4-201ENST00000375218 BLMP54132 1417 aaPredicted RBP10.75□□□□□ -0.69
UBR4-201ENST00000375218 NDUFAF2Q8N183 169 aa10.74□□□□□ -0.69
UBR4-201ENST00000375218 QTRT2Q9H974 415 aaKnown RBP10.74□□□□□ -0.69
UBR4-201ENST00000375218 IPO7O95373 1038 aaKnown RBP10.74□□□□□ -0.69
UBR4-201ENST00000375218 LRRC41Q15345 812 aa10.74□□□□□ -0.69
UBR4-201ENST00000375218 MPP4Q96JB8 637 aa10.74□□□□□ -0.69
UBR4-201ENST00000375218 PTPRHQ9HD43 1115 aa10.74□□□□□ -0.69
UBR4-201ENST00000375218 EID1Q9Y6B2 187 aa10.74□□□□□ -0.69
UBR4-201ENST00000375218 HTATSF1O43719 755 aaKnown RBP10.74□□□□□ -0.69
UBR4-201ENST00000375218 SNRNP27Q8WVK2 155 aaKnown RBP10.74□□□□□ -0.69
UBR4-201ENST00000375218 TRPM3Q9HCF6 1732 aaPredicted RBP10.74□□□□□ -0.69
UBR4-201ENST00000375218 SSH2Q76I76 1423 aa10.74□□□□□ -0.69
UBR4-201ENST00000375218 KIAA1958Q8N8K9 716 aa10.74□□□□□ -0.69
UBR4-201ENST00000375218 PCNTO95613 3336 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 COQ9O75208 318 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 MTA2O94776 668 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 CHPFQ8IZ52 775 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 FMNL2Q96PY5 1086 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 KIF5CO60282 957 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 FOSL1P15407 271 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 CT47A1Q5JQC4 288 aaPredicted RBP10.73□□□□□ -0.69
UBR4-201ENST00000375218 UTP14CQ5TAP6 766 aaKnown RBP10.73□□□□□ -0.69
UBR4-201ENST00000375218 MSL1Q68DK7 614 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 USP48Q86UV5 1035 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 NUCKS1Q9H1E3 243 aaKnown RBP10.73□□□□□ -0.69
UBR4-201ENST00000375218 PRR36Q9H6K5 1346 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 FANCIQ9NVI1 1328 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 ZNF853P0CG23 659 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 SLFNL1Q499Z3 407 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 ZNF394Q53GI3 561 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 PHF8Q9UPP1 1060 aa10.73□□□□□ -0.69
UBR4-201ENST00000375218 PABPN1LA6NDY0 278 aaKnown RBP10.72□□□□□ -0.69
UBR4-201ENST00000375218 PPP2R5BQ15173 497 aa10.72□□□□□ -0.69
UBR4-201ENST00000375218 EPAS1Q99814 870 aa10.72□□□□□ -0.69
UBR4-201ENST00000375218 PDGFDQ9GZP0 370 aaPredicted RBP10.72□□□□□ -0.69
UBR4-201ENST00000375218 RETREG1Q9H6L5 497 aa10.72□□□□□ -0.69
UBR4-201ENST00000375218 ITSN1Q15811 1721 aa10.72□□□□□ -0.69
UBR4-201ENST00000375218 GNALP38405 381 aa10.72□□□□□ -0.69
UBR4-201ENST00000375218 AMPD3Q01432 767 aa10.72□□□□□ -0.69
UBR4-201ENST00000375218 POU5F1BQ06416 359 aa10.72□□□□□ -0.69
UBR4-201ENST00000375218 GOPCQ9HD26 462 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms