RNA–Protein interactions for RNA: ENST00000375128.4

XPA-201, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPA, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-201ENST00000375128 CTSWP56202 376 aa27.41■■□□□ 1.98
XPA-201ENST00000375128 DDX46Q7L014 1031 aaKnown RBP27.41■■□□□ 1.98
XPA-201ENST00000375128 ITPRIPQ8IWB1 547 aa27.41■■□□□ 1.98
XPA-201ENST00000375128 PLA2G12BQ9BX93 195 aa27.41■■□□□ 1.98
XPA-201ENST00000375128 UTYO14607 1347 aa27.4■■□□□ 1.98
XPA-201ENST00000375128 DCAF8L1A6NGE4 600 aa27.4■■□□□ 1.98
XPA-201ENST00000375128 HOXA10P31260 410 aaPredicted RBP27.4■■□□□ 1.98
XPA-201ENST00000375128 CCDC152Q4G0S7 254 aa27.4■■□□□ 1.98
XPA-201ENST00000375128 SUCLG2Q96I99 432 aa27.39■■□□□ 1.97
XPA-201ENST00000375128 UBTFL1P0CB47 393 aaPredicted RBP27.38■■□□□ 1.97
XPA-201ENST00000375128 TTLL11Q8NHH1 800 aa27.38■■□□□ 1.97
XPA-201ENST00000375128 CRAMP1Q96RY5 1269 aa27.38■■□□□ 1.97
XPA-201ENST00000375128 ZNF219Q9P2Y4 722 aaPredicted RBP27.38■■□□□ 1.97
XPA-201ENST00000375128 YBX3P16989 372 aaKnown RBP eCLIP27.37■■□□□ 1.97
XPA-201ENST00000375128 PRPF40BQ6NWY9 871 aaKnown RBP27.37■■□□□ 1.97
XPA-201ENST00000375128 MEIS3Q99687 375 aa27.37■■□□□ 1.97
XPA-201ENST00000375128 TAF1P21675 1872 aa27.37■■□□□ 1.97
XPA-201ENST00000375128 SLX4Q8IY92 1834 aa27.37■■□□□ 1.97
XPA-201ENST00000375128 FOXO4P98177 505 aa27.36■■□□□ 1.97
XPA-201ENST00000375128 EPHA10Q5JZY3 1008 aa27.36■■□□□ 1.97
XPA-201ENST00000375128 CHMP3Q9Y3E7 222 aa27.36■■□□□ 1.97
XPA-201ENST00000375128 RRP1P56182 461 aaKnown RBP27.35■■□□□ 1.97
XPA-201ENST00000375128 GNAI3P08754 354 aa27.34■■□□□ 1.97
XPA-201ENST00000375128 LMBR1LQ6UX01 489 aa27.34■■□□□ 1.97
XPA-201ENST00000375128 KAZALD1Q96I82 304 aa27.34■■□□□ 1.97
XPA-201ENST00000375128 GREM2Q9H772 168 aa27.34■■□□□ 1.97
XPA-201ENST00000375128 SEC31BQ9NQW1 1179 aa27.34■■□□□ 1.97
XPA-201ENST00000375128 ARFGEF1Q9Y6D6 1849 aa27.34■■□□□ 1.97
XPA-201ENST00000375128 CSF1RP07333 972 aa27.33■■□□□ 1.97
XPA-201ENST00000375128 GRAPQ13588 217 aa27.33■■□□□ 1.97
XPA-201ENST00000375128 PDE3AQ14432 1141 aa27.33■■□□□ 1.97
XPA-201ENST00000375128 C20orf194Q5TEA3 1177 aa27.33■■□□□ 1.97
XPA-201ENST00000375128 GRAPLQ8TC17 118 aaPredicted RBP27.33■■□□□ 1.97
XPA-201ENST00000375128 HDAC5Q9UQL6 1122 aa27.33■■□□□ 1.97
XPA-201ENST00000375128 COG6Q9Y2V7 657 aa27.33■■□□□ 1.97
XPA-201ENST00000375128 C21orf2O43822 256 aa27.33■■□□□ 1.96
XPA-201ENST00000375128 CELF1Q92879 486 aaKnown RBP27.33■■□□□ 1.96
XPA-201ENST00000375128 BICC1Q9H694 974 aaKnown RBP27.33■■□□□ 1.96
XPA-201ENST00000375128 FAM161AQ3B820 660 aa27.32■■□□□ 1.96
XPA-201ENST00000375128 PPEF1O14829 653 aaPredicted RBP27.31■■□□□ 1.96
XPA-201ENST00000375128 BBOX1O75936 387 aa27.31■■□□□ 1.96
XPA-201ENST00000375128 MVPQ14764 893 aaKnown RBP27.31■■□□□ 1.96
XPA-201ENST00000375128 LRRFIP2Q9Y608 721 aaKnown RBP27.31■■□□□ 1.96
XPA-201ENST00000375128 GRIN3BO60391 1043 aa27.3■■□□□ 1.96
XPA-201ENST00000375128 ITGA6P23229 1130 aa27.3■■□□□ 1.96
XPA-201ENST00000375128 SUPT16HQ9Y5B9 1047 aaKnown RBP27.3■■□□□ 1.96
XPA-201ENST00000375128 ZBTB7BO15156 539 aaPredicted RBP27.29■■□□□ 1.96
XPA-201ENST00000375128 RPS8P62241 208 aaKnown RBP27.29■■□□□ 1.96
XPA-201ENST00000375128 CDC5LQ99459 802 aaKnown RBP27.29■■□□□ 1.96
XPA-201ENST00000375128 ANKRD18BA2A2Z9 1011 aa27.28■■□□□ 1.96
XPA-201ENST00000375128 IFIT5Q13325 482 aaKnown RBP27.28■■□□□ 1.96
XPA-201ENST00000375128 ANKRD18AQ8IVF6 992 aa27.28■■□□□ 1.96
XPA-201ENST00000375128 ANKRD44Q8N8A2 993 aa27.28■■□□□ 1.96
XPA-201ENST00000375128 TMX4Q9H1E5 349 aaPredicted RBP27.28■■□□□ 1.96
XPA-201ENST00000375128 DDX19BQ9UMR2 479 aa27.28■■□□□ 1.96
XPA-201ENST00000375128 RTL9Q8NET4 1388 aa27.28■■□□□ 1.96
XPA-201ENST00000375128 GNAI2P04899 355 aa27.27■■□□□ 1.96
XPA-201ENST00000375128 CCDC57Q2TAC2 916 aa27.27■■□□□ 1.96
XPA-201ENST00000375128 RABL6Q3YEC7 729 aaPredicted RBP27.27■■□□□ 1.96
XPA-201ENST00000375128 OLFM4Q6UX06 510 aa27.27■■□□□ 1.96
XPA-201ENST00000375128 ARHGAP27Q6ZUM4 889 aa27.27■■□□□ 1.96
XPA-201ENST00000375128 COL4A1P02462 1669 aa27.26■■□□□ 1.95
XPA-201ENST00000375128 SOGA3Q5TF21 947 aa27.26■■□□□ 1.95
XPA-201ENST00000375128 C7orf43Q8WVR3 580 aa27.26■■□□□ 1.95
XPA-201ENST00000375128 ATP6V0A2Q9Y487 856 aa27.25■■□□□ 1.95
XPA-201ENST00000375128 IGHMBP2P38935 993 aaKnown RBP27.24■■□□□ 1.95
XPA-201ENST00000375128 CCDC93Q567U6 631 aa27.24■■□□□ 1.95
XPA-201ENST00000375128 TAF7LQ5H9L4 462 aa27.24■■□□□ 1.95
XPA-201ENST00000375128 TMC4Q7Z404 712 aa27.24■■□□□ 1.95
XPA-201ENST00000375128 SPEF2Q9C093 1822 aa27.24■■□□□ 1.95
XPA-201ENST00000375128 SLC51AQ86UW1 340 aa27.24■■□□□ 1.95
XPA-201ENST00000375128 SP8Q8IXZ3 490 aa27.24■■□□□ 1.95
XPA-201ENST00000375128 C1orf115Q9H7X2 142 aa27.24■■□□□ 1.95
XPA-201ENST00000375128 MPHOSPH8Q99549 860 aa27.23■■□□□ 1.95
XPA-201ENST00000375128 CC2D2BQ6DHV5 1058 aa27.22■■□□□ 1.95
XPA-201ENST00000375128 ZNF594Q96JF6 807 aaPredicted RBP27.22■■□□□ 1.95
XPA-201ENST00000375128 CHMP4BQ9H444 224 aaKnown RBP27.22■■□□□ 1.95
XPA-201ENST00000375128 RTKN2Q8IZC4 609 aa27.2■■□□□ 1.94
XPA-201ENST00000375128 BSDC1Q9NW68 430 aaPredicted RBP27.19■■□□□ 1.94
XPA-201ENST00000375128 GOLGB1Q14789 3259 aaKnown RBP27.19■■□□□ 1.94
XPA-201ENST00000375128 FER1L6Q2WGJ9 1857 aa27.18■■□□□ 1.94
XPA-201ENST00000375128 NSFL1CQ9UNZ2 370 aaKnown RBP27.17■■□□□ 1.94
XPA-201ENST00000375128 SRGAP3O43295 1099 aa27.16■■□□□ 1.94
XPA-201ENST00000375128 RASSF7Q02833 373 aa27.16■■□□□ 1.94
XPA-201ENST00000375128 GRIPAP1Q4V328 841 aa27.16■■□□□ 1.94
XPA-201ENST00000375128 LDHAL6AQ6ZMR3 332 aa27.16■■□□□ 1.94
XPA-201ENST00000375128 MPNDQ8N594 471 aa27.16■■□□□ 1.94
XPA-201ENST00000375128 KLHDC4Q8TBB5 520 aa27.16■■□□□ 1.94
XPA-201ENST00000375128 TAOK3Q9H2K8 898 aa27.16■■□□□ 1.94
XPA-201ENST00000375128 CNNM1Q9NRU3 951 aa27.16■■□□□ 1.94
XPA-201ENST00000375128 ZBTB40Q9NUA8 1239 aa27.16■■□□□ 1.94
XPA-201ENST00000375128 NFKBIEO00221 500 aa27.16■■□□□ 1.94
XPA-201ENST00000375128 DPP8Q6V1X1 898 aaPredicted RBP27.16■■□□□ 1.94
XPA-201ENST00000375128 CRBNQ96SW2 442 aa27.16■■□□□ 1.94
XPA-201ENST00000375128 LRRC37AA6NMS7 1700 aa27.15■■□□□ 1.94
XPA-201ENST00000375128 GPSM2P81274 684 aa27.15■■□□□ 1.94
XPA-201ENST00000375128 FKBP4Q02790 459 aaKnown RBP eCLIP27.15■■□□□ 1.94
XPA-201ENST00000375128 ANKIB1Q9P2G1 1089 aa27.15■■□□□ 1.94
XPA-201ENST00000375128 MINPP1Q9UNW1 487 aa27.15■■□□□ 1.94
XPA-201ENST00000375128 CENPBP07199 599 aaPredicted RBP27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms