RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 ANKMY2Q8IV38 441 aa8.88□□□□□ -0.99
PMS1-202ENST00000374826 LPIN3Q9BQK8 851 aa8.88□□□□□ -0.99
PMS1-202ENST00000374826 PPP1R12CQ9BZL4 782 aa8.88□□□□□ -0.99
PMS1-202ENST00000374826 PERM1Q5SV97 790 aa8.87□□□□□ -0.99
PMS1-202ENST00000374826 DHX32Q7L7V1 743 aaKnown RBP8.87□□□□□ -0.99
PMS1-202ENST00000374826 NBPF11Q86T75 865 aa8.87□□□□□ -0.99
PMS1-202ENST00000374826 WFDC12Q8WWY7 111 aa8.87□□□□□ -0.99
PMS1-202ENST00000374826 TTC9Q92623 222 aa8.87□□□□□ -0.99
PMS1-202ENST00000374826 IFT43Q96FT9 208 aa8.87□□□□□ -0.99
PMS1-202ENST00000374826 SASH3O75995 380 aa8.86□□□□□ -0.99
PMS1-202ENST00000374826 MICAL2O94851 1124 aa8.86□□□□□ -0.99
PMS1-202ENST00000374826 PLAURQ03405 335 aa8.86□□□□□ -0.99
PMS1-202ENST00000374826 ELMSAN1Q6PJG2 1045 aa8.86□□□□□ -0.99
PMS1-202ENST00000374826 KRT25Q7Z3Z0 450 aa8.86□□□□□ -0.99
PMS1-202ENST00000374826 VRTNQ9H8Y1 702 aa8.86□□□□□ -0.99
PMS1-202ENST00000374826 FAM196BA6NMK8 535 aa8.85□□□□□ -0.99
PMS1-202ENST00000374826 HYAL3O43820 417 aaPredicted RBP8.85□□□□□ -0.99
PMS1-202ENST00000374826 IREB2P48200 963 aaKnown RBP8.85□□□□□ -0.99
PMS1-202ENST00000374826 ARSDP51689 593 aa8.85□□□□□ -0.99
PMS1-202ENST00000374826 DGKZQ13574 1117 aa8.85□□□□□ -0.99
PMS1-202ENST00000374826 LRP8Q14114 963 aa8.85□□□□□ -0.99
PMS1-202ENST00000374826 C11orf91Q3C1V1 193 aa8.85□□□□□ -0.99
PMS1-202ENST00000374826 IGF2-ASQ6U949 168 aa8.85□□□□□ -0.99
PMS1-202ENST00000374826 CALR3Q96L12 384 aaKnown RBP8.85□□□□□ -0.99
PMS1-202ENST00000374826 USP17L15C9J2P7 530 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 USP17L10C9JJH3 530 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 USP17L13C9JLJ4 530 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 USP17L12C9JPN9 530 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 USP17L11C9JVI0 530 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 USP17L21D6R901 530 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 USP17L18D6R9N7 530 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 USP17L22D6RA61 530 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 USP17L17D6RBQ6 530 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 USP17L19D6RCP7 530 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 USP17L20D6RJB6 530 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 WEE1P30291 646 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 USP17L24Q0WX57 530 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 WFDC8Q8IUA0 241 aa8.84□□□□□ -0.99
PMS1-202ENST00000374826 QTRT2Q9H974 415 aaKnown RBP8.84□□□□□ -0.99
PMS1-202ENST00000374826 OPLAHO14841 1288 aa8.83□□□□□ -1
PMS1-202ENST00000374826 RARAP10276 462 aa8.83□□□□□ -1
PMS1-202ENST00000374826 NOS3P29474 1203 aa8.83□□□□□ -1
PMS1-202ENST00000374826 GPLD1P80108 840 aa8.83□□□□□ -1
PMS1-202ENST00000374826 MLLT1Q03111 559 aaPredicted RBP8.83□□□□□ -1
PMS1-202ENST00000374826 ARXQ96QS3 562 aa8.83□□□□□ -1
PMS1-202ENST00000374826 FOXO3O43524 673 aa8.82□□□□□ -1
PMS1-202ENST00000374826 LMOD1P29536 600 aaPredicted RBP8.82□□□□□ -1
PMS1-202ENST00000374826 MYO19Q96H55 970 aa8.82□□□□□ -1
PMS1-202ENST00000374826 DEAF1O75398 565 aaPredicted RBP8.81□□□□□ -1
PMS1-202ENST00000374826 ARID4AP29374 1257 aaPredicted RBP8.81□□□□□ -1
PMS1-202ENST00000374826 NRLP54845 237 aa8.81□□□□□ -1
PMS1-202ENST00000374826 HFE2Q6ZVN8 426 aa8.81□□□□□ -1
PMS1-202ENST00000374826 SMG9Q9H0W8 520 aaKnown RBP8.81□□□□□ -1
PMS1-202ENST00000374826 TLR7Q9NYK1 1049 aaKnown RBP8.81□□□□□ -1
PMS1-202ENST00000374826 RTCBQ9Y3I0 505 aaKnown RBP8.81□□□□□ -1
PMS1-202ENST00000374826 EGFRP00533 1210 aa8.8□□□□□ -1
PMS1-202ENST00000374826 VTI1AQ96AJ9 217 aa8.8□□□□□ -1
PMS1-202ENST00000374826 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.8□□□□□ -1
PMS1-202ENST00000374826 DLL1O00548 723 aa8.79□□□□□ -1
PMS1-202ENST00000374826 KRTAP1-3Q8IUG1 177 aa8.79□□□□□ -1
PMS1-202ENST00000374826 LRFN2Q9ULH4 789 aa8.79□□□□□ -1
PMS1-202ENST00000374826 USP20Q9Y2K6 914 aa8.79□□□□□ -1
PMS1-202ENST00000374826 MEGF10Q96KG7 1140 aa8.78□□□□□ -1
PMS1-202ENST00000374826 ZNF777Q9ULD5 760 aaPredicted RBP8.78□□□□□ -1
PMS1-202ENST00000374826 RNF112Q9ULX5 631 aa8.78□□□□□ -1
PMS1-202ENST00000374826 GTF3C3Q9Y5Q9 886 aa8.78□□□□□ -1
PMS1-202ENST00000374826 LOC102724428A0A0B4J2F2 783 aa8.77□□□□□ -1.01
PMS1-202ENST00000374826 XYLBO75191 536 aa8.77□□□□□ -1.01
PMS1-202ENST00000374826 EIF2AK2P19525 551 aaKnown RBP8.77□□□□□ -1.01
PMS1-202ENST00000374826 SIK1P57059 783 aa8.77□□□□□ -1.01
PMS1-202ENST00000374826 FAM200AQ8TCP9 573 aa8.77□□□□□ -1.01
PMS1-202ENST00000374826 J3QW42 95 aa8.76□□□□□ -1.01
PMS1-202ENST00000374826 DZIP1LQ8IYY4 767 aaKnown RBP8.76□□□□□ -1.01
PMS1-202ENST00000374826 CMTR1Q8N1G2 835 aaKnown RBP8.76□□□□□ -1.01
PMS1-202ENST00000374826 TMEM130Q8N3G9 435 aa8.76□□□□□ -1.01
PMS1-202ENST00000374826 PRR23CQ6ZRP0 262 aa8.75□□□□□ -1.01
PMS1-202ENST00000374826 TREML1Q86YW5 311 aa8.75□□□□□ -1.01
PMS1-202ENST00000374826 RGL4Q8IZJ4 473 aa8.75□□□□□ -1.01
PMS1-202ENST00000374826 PLD4Q96BZ4 506 aa8.75□□□□□ -1.01
PMS1-202ENST00000374826 AKTIPQ9H8T0 292 aa8.75□□□□□ -1.01
PMS1-202ENST00000374826 MMP20O60882 483 aa8.74□□□□□ -1.01
PMS1-202ENST00000374826 ALX3O95076 343 aa8.74□□□□□ -1.01
PMS1-202ENST00000374826 PSAPP07602 524 aa8.74□□□□□ -1.01
PMS1-202ENST00000374826 COX20Q5RI15 118 aa8.74□□□□□ -1.01
PMS1-202ENST00000374826 SLC51AQ86UW1 340 aa8.74□□□□□ -1.01
PMS1-202ENST00000374826 IL22RA1Q8N6P7 574 aa8.74□□□□□ -1.01
PMS1-202ENST00000374826 ZMYND15Q9H091 742 aa8.74□□□□□ -1.01
PMS1-202ENST00000374826 KCNMB2Q9Y691 235 aa8.74□□□□□ -1.01
PMS1-202ENST00000374826 GDF6Q6KF10 455 aaPredicted RBP8.73□□□□□ -1.01
PMS1-202ENST00000374826 MRPL18Q9H0U6 180 aaKnown RBP8.73□□□□□ -1.01
PMS1-202ENST00000374826 GHRHP01286 108 aa8.72□□□□□ -1.01
PMS1-202ENST00000374826 CFAP70Q5T0N1 1121 aa8.72□□□□□ -1.01
PMS1-202ENST00000374826 F8W735 103 aaPredicted RBP8.71□□□□□ -1.02
PMS1-202ENST00000374826 HOXD8P13378 290 aaPredicted RBP8.71□□□□□ -1.02
PMS1-202ENST00000374826 RFX1P22670 979 aa8.71□□□□□ -1.02
PMS1-202ENST00000374826 SOX18P35713 384 aa8.71□□□□□ -1.02
PMS1-202ENST00000374826 CDCA8Q53HL2 280 aa8.71□□□□□ -1.02
PMS1-202ENST00000374826 NSUN5Q96P11 429 aaKnown RBP8.71□□□□□ -1.02
PMS1-202ENST00000374826 FKBP5Q13451 457 aaPredicted RBP8.7□□□□□ -1.02
PMS1-202ENST00000374826 SETDB1Q15047 1291 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms