RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 TUBGCP6Q96RT7 1819 aa20.35■□□□□ 0.85
RXRB-201ENST00000374680 CEBPZQ03701 1054 aaKnown RBP20.35■□□□□ 0.85
RXRB-201ENST00000374680 TAF5LO75529 589 aa20.34■□□□□ 0.85
RXRB-201ENST00000374680 PUS3Q9BZE2 481 aaKnown RBP20.34■□□□□ 0.85
RXRB-201ENST00000374680 RNF20Q5VTR2 975 aa20.33■□□□□ 0.85
RXRB-201ENST00000374680 COPRSQ9NQ92 184 aa20.33■□□□□ 0.85
RXRB-201ENST00000374680 HSP90AB3PQ58FF7 597 aa20.33■□□□□ 0.85
RXRB-201ENST00000374680 ZCRB1Q8TBF4 217 aaKnown RBP20.33■□□□□ 0.85
RXRB-201ENST00000374680 IL17RAQ96F46 866 aa20.33■□□□□ 0.85
RXRB-201ENST00000374680 LMO7Q8WWI1 1683 aa20.33■□□□□ 0.84
RXRB-201ENST00000374680 HIP1O00291 1037 aa20.33■□□□□ 0.84
RXRB-201ENST00000374680 PSMA5P28066 241 aa20.33■□□□□ 0.84
RXRB-201ENST00000374680 EPB41L2O43491 1005 aaKnown RBP20.32■□□□□ 0.84
RXRB-201ENST00000374680 COL15A1P39059 1388 aa20.32■□□□□ 0.84
RXRB-201ENST00000374680 TOB2Q14106 344 aaPredicted RBP20.32■□□□□ 0.84
RXRB-201ENST00000374680 CADPS2Q86UW7 1296 aa20.32■□□□□ 0.84
RXRB-201ENST00000374680 ZSCAN31Q96LW9 406 aaPredicted RBP20.32■□□□□ 0.84
RXRB-201ENST00000374680 R3HCC1Q9Y3T6 440 aaKnown RBP20.32■□□□□ 0.84
RXRB-201ENST00000374680 RPS6KB1P23443 525 aa20.31■□□□□ 0.84
RXRB-201ENST00000374680 EVA1CP58658 441 aa20.31■□□□□ 0.84
RXRB-201ENST00000374680 FKBP4Q02790 459 aaKnown RBP eCLIP20.31■□□□□ 0.84
RXRB-201ENST00000374680 SLIT3O75094 1523 aa20.31■□□□□ 0.84
RXRB-201ENST00000374680 UBE2HP62256 183 aa20.31■□□□□ 0.84
RXRB-201ENST00000374680 SYNE4Q8N205 404 aa20.31■□□□□ 0.84
RXRB-201ENST00000374680 PLBD2Q8NHP8 589 aa20.31■□□□□ 0.84
RXRB-201ENST00000374680 SH2B1Q9NRF2 756 aaPredicted RBP20.31■□□□□ 0.84
RXRB-201ENST00000374680 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.31■□□□□ 0.84
RXRB-201ENST00000374680 Q6ZUG5 572 aa20.3■□□□□ 0.84
RXRB-201ENST00000374680 TM6SF1Q9BZW5 370 aa20.3■□□□□ 0.84
RXRB-201ENST00000374680 ATP5JP18859 108 aa20.3■□□□□ 0.84
RXRB-201ENST00000374680 CCDC183Q5T5S1 534 aa20.3■□□□□ 0.84
RXRB-201ENST00000374680 BRF1Q92994 677 aa20.3■□□□□ 0.84
RXRB-201ENST00000374680 CYP21A2P08686 494 aa20.3■□□□□ 0.84
RXRB-201ENST00000374680 CCT2P78371 535 aaKnown RBP20.3■□□□□ 0.84
RXRB-201ENST00000374680 PDLIM2Q96JY6 352 aa20.3■□□□□ 0.84
RXRB-201ENST00000374680 ATP6V1DQ9Y5K8 247 aa20.3■□□□□ 0.84
RXRB-201ENST00000374680 PRKCSHP14314 528 aaPredicted RBP20.29■□□□□ 0.84
RXRB-201ENST00000374680 TTC6Q86TZ1 520 aa20.29■□□□□ 0.84
RXRB-201ENST00000374680 CKAP2LQ8IYA6 745 aa20.29■□□□□ 0.84
RXRB-201ENST00000374680 NEK1Q96PY6 1258 aa20.29■□□□□ 0.84
RXRB-201ENST00000374680 C17orf53Q8N3J3 647 aaPredicted RBP20.29■□□□□ 0.84
RXRB-201ENST00000374680 FOXO4P98177 505 aa20.28■□□□□ 0.84
RXRB-201ENST00000374680 RAB11FIP4Q86YS3 637 aa20.28■□□□□ 0.84
RXRB-201ENST00000374680 FAM89AQ96GI7 184 aa20.28■□□□□ 0.84
RXRB-201ENST00000374680 CWC25Q9NXE8 425 aaPredicted RBP20.28■□□□□ 0.84
RXRB-201ENST00000374680 SPATA31A3Q5VYP0 1347 aa20.28■□□□□ 0.84
RXRB-201ENST00000374680 PHF14O94880 888 aa20.28■□□□□ 0.84
RXRB-201ENST00000374680 GPTP24298 496 aa20.28■□□□□ 0.84
RXRB-201ENST00000374680 GUCY1B3Q02153 619 aa20.28■□□□□ 0.84
RXRB-201ENST00000374680 MST1RQ04912 1400 aa20.28■□□□□ 0.84
RXRB-201ENST00000374680 LIG1P18858 919 aa20.27■□□□□ 0.84
RXRB-201ENST00000374680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.27■□□□□ 0.848e-7■■□□□ 11.4
RXRB-201ENST00000374680 USP54Q70EL1 1684 aa20.27■□□□□ 0.84
RXRB-201ENST00000374680 GOLGA6L4A6NEF3 574 aa20.27■□□□□ 0.84
RXRB-201ENST00000374680 GORABQ5T7V8 394 aa20.27■□□□□ 0.84
RXRB-201ENST00000374680 TTLL5Q6EMB2 1281 aa20.27■□□□□ 0.84
RXRB-201ENST00000374680 BRINP3Q76B58 766 aa20.27■□□□□ 0.84
RXRB-201ENST00000374680 HAND2P61296 217 aa20.26■□□□□ 0.83
RXRB-201ENST00000374680 MCMDC2Q4G0Z9 681 aa20.26■□□□□ 0.83
RXRB-201ENST00000374680 CASP7P55210 303 aa20.26■□□□□ 0.83
RXRB-201ENST00000374680 ATG9AQ7Z3C6 839 aa20.26■□□□□ 0.83
RXRB-201ENST00000374680 SYTL4Q96C24 671 aaPredicted RBP20.26■□□□□ 0.83
RXRB-201ENST00000374680 TTC12Q9H892 705 aaPredicted RBP20.26■□□□□ 0.83
RXRB-201ENST00000374680 NCOA5Q9HCD5 579 aaKnown RBP20.26■□□□□ 0.83
RXRB-201ENST00000374680 KCNB2Q92953 911 aa20.26■□□□□ 0.83
RXRB-201ENST00000374680 NOL7Q9UMY1 257 aaKnown RBP20.26■□□□□ 0.83
RXRB-201ENST00000374680 ZNF609O15014 1411 aa20.25■□□□□ 0.83
RXRB-201ENST00000374680 ADCY5O95622 1261 aa20.25■□□□□ 0.83
RXRB-201ENST00000374680 STOX1Q6ZVD7 989 aa20.25■□□□□ 0.83
RXRB-201ENST00000374680 SPC24Q8NBT2 197 aa20.25■□□□□ 0.83
RXRB-201ENST00000374680 KDM4AO75164 1064 aa20.25■□□□□ 0.83
RXRB-201ENST00000374680 APOBRQ0VD83 1088 aa20.25■□□□□ 0.83
RXRB-201ENST00000374680 RABL6Q3YEC7 729 aaPredicted RBP20.25■□□□□ 0.83
RXRB-201ENST00000374680 PI16Q6UXB8 463 aa20.25■□□□□ 0.83
RXRB-201ENST00000374680 PAG1Q9NWQ8 432 aa20.25■□□□□ 0.83
RXRB-201ENST00000374680 H3BQV1 296 aa20.24■□□□□ 0.83
RXRB-201ENST00000374680 IFIT1P09914 478 aaKnown RBP20.24■□□□□ 0.83
RXRB-201ENST00000374680 IFFO2Q5TF58 517 aa20.24■□□□□ 0.83
RXRB-201ENST00000374680 ARID3AQ99856 593 aa20.24■□□□□ 0.83
RXRB-201ENST00000374680 HAUS7Q99871 368 aa20.24■□□□□ 0.83
RXRB-201ENST00000374680 ASAP1Q9ULH1 1129 aa20.24■□□□□ 0.83
RXRB-201ENST00000374680 MED23Q9ULK4 1368 aa20.24■□□□□ 0.83
RXRB-201ENST00000374680 A0A1B0GUL7 405 aa20.24■□□□□ 0.83
RXRB-201ENST00000374680 ADORA1P30542 326 aa20.24■□□□□ 0.83
RXRB-201ENST00000374680 KRT85P78386 507 aa20.24■□□□□ 0.83
RXRB-201ENST00000374680 RBM10P98175 930 aaKnown RBP20.24■□□□□ 0.83
RXRB-201ENST00000374680 GPHNQ9NQX3 736 aaPredicted RBP20.24■□□□□ 0.83
RXRB-201ENST00000374680 H7C1W4 665 aa20.23■□□□□ 0.83
RXRB-201ENST00000374680 WASHC4Q2M389 1173 aa20.23■□□□□ 0.83
RXRB-201ENST00000374680 TAF7LQ5H9L4 462 aa20.23■□□□□ 0.83
RXRB-201ENST00000374680 FTOQ9C0B1 505 aaKnown RBP eCLIP20.23■□□□□ 0.83
RXRB-201ENST00000374680 ZKSCAN5Q9Y2L8 839 aa20.23■□□□□ 0.83
RXRB-201ENST00000374680 FAM177BA6PVY3 158 aa20.23■□□□□ 0.83
RXRB-201ENST00000374680 C5P01031 1676 aa20.23■□□□□ 0.83
RXRB-201ENST00000374680 KBTBD3Q8NAB2 608 aa20.23■□□□□ 0.83
RXRB-201ENST00000374680 FAM184AQ8NB25 1140 aa20.23■□□□□ 0.83
RXRB-201ENST00000374680 SPATA32Q96LK8 384 aa20.23■□□□□ 0.83
RXRB-201ENST00000374680 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.23■□□□□ 0.83
RXRB-201ENST00000374680 OVOS2A0A0G2JMS6 1433 aa20.22■□□□□ 0.83
RXRB-201ENST00000374680 DNTTIP2Q5QJE6 756 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms