RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 USP44Q9H0E7 712 aa19.13■□□□□ 0.65
PFDN6-203ENST00000374610 DDX60Q8IY21 1712 aaKnown RBP19.13■□□□□ 0.65
PFDN6-203ENST00000374610 GRIN3BO60391 1043 aa19.12■□□□□ 0.65
PFDN6-203ENST00000374610 HOXA10P31260 410 aaPredicted RBP19.12■□□□□ 0.65
PFDN6-203ENST00000374610 PRPF40BQ6NWY9 871 aaKnown RBP19.12■□□□□ 0.65
PFDN6-203ENST00000374610 PLA2G12BQ9BX93 195 aa19.12■□□□□ 0.65
PFDN6-203ENST00000374610 COL11A2P13942 1736 aaPredicted RBP19.11■□□□□ 0.65
PFDN6-203ENST00000374610 CASP7P55210 303 aa19.11■□□□□ 0.65
PFDN6-203ENST00000374610 TAF7LQ5H9L4 462 aa19.11■□□□□ 0.65
PFDN6-203ENST00000374610 SUCLG2Q96I99 432 aa19.11■□□□□ 0.65
PFDN6-203ENST00000374610 LAMB2P55268 1798 aa19.11■□□□□ 0.65
PFDN6-203ENST00000374610 KIAA1551Q9HCM1 1747 aa19.11■□□□□ 0.65
PFDN6-203ENST00000374610 UTYO14607 1347 aa19.1■□□□□ 0.65
PFDN6-203ENST00000374610 PPEF1O14829 653 aaPredicted RBP19.1■□□□□ 0.65
PFDN6-203ENST00000374610 C21orf2O43822 256 aa19.1■□□□□ 0.65
PFDN6-203ENST00000374610 GRAPQ13588 217 aa19.1■□□□□ 0.65
PFDN6-203ENST00000374610 SOGA3Q5TF21 947 aa19.1■□□□□ 0.65
PFDN6-203ENST00000374610 LMBR1LQ6UX01 489 aa19.1■□□□□ 0.65
PFDN6-203ENST00000374610 ARHGAP27Q6ZUM4 889 aa19.1■□□□□ 0.65
PFDN6-203ENST00000374610 TTLL11Q8NHH1 800 aa19.1■□□□□ 0.65
PFDN6-203ENST00000374610 GRAPLQ8TC17 118 aaPredicted RBP19.1■□□□□ 0.65
PFDN6-203ENST00000374610 CDC5LQ99459 802 aaKnown RBP19.1■□□□□ 0.65
PFDN6-203ENST00000374610 DLEC1Q9Y238 1755 aa19.1■□□□□ 0.65
PFDN6-203ENST00000374610 BBOX1O75936 387 aa19.09■□□□□ 0.65
PFDN6-203ENST00000374610 RLBP1P12271 317 aa19.09■□□□□ 0.65
PFDN6-203ENST00000374610 YBX3P16989 372 aaKnown RBP eCLIP19.09■□□□□ 0.65
PFDN6-203ENST00000374610 RRP1P56182 461 aaKnown RBP19.09■□□□□ 0.65
PFDN6-203ENST00000374610 IFIT5Q13325 482 aaKnown RBP19.09■□□□□ 0.65
PFDN6-203ENST00000374610 CCDC57Q2TAC2 916 aa19.09■□□□□ 0.65
PFDN6-203ENST00000374610 ANKRD18AQ8IVF6 992 aa19.09■□□□□ 0.65
PFDN6-203ENST00000374610 MEIS3Q99687 375 aa19.09■□□□□ 0.65
PFDN6-203ENST00000374610 CHMP4BQ9H444 224 aaKnown RBP19.09■□□□□ 0.65
PFDN6-203ENST00000374610 CACNA1SQ13698 1873 aa19.08■□□□□ 0.65
PFDN6-203ENST00000374610 ANKRD18BA2A2Z9 1011 aa19.08■□□□□ 0.64
PFDN6-203ENST00000374610 ITGA6P23229 1130 aa19.08■□□□□ 0.64
PFDN6-203ENST00000374610 IGHMBP2P38935 993 aaKnown RBP19.08■□□□□ 0.64
PFDN6-203ENST00000374610 FOXO4P98177 505 aa19.08■□□□□ 0.64
PFDN6-203ENST00000374610 PDE3AQ14432 1141 aa19.08■□□□□ 0.64
PFDN6-203ENST00000374610 BICC1Q9H694 974 aaKnown RBP19.08■□□□□ 0.64
PFDN6-203ENST00000374610 GREM2Q9H772 168 aa19.08■□□□□ 0.64
PFDN6-203ENST00000374610 SEC31BQ9NQW1 1179 aa19.08■□□□□ 0.64
PFDN6-203ENST00000374610 COG6Q9Y2V7 657 aa19.08■□□□□ 0.64
PFDN6-203ENST00000374610 RPS8P62241 208 aaKnown RBP19.07■□□□□ 0.64
PFDN6-203ENST00000374610 FAM161AQ3B820 660 aa19.07■□□□□ 0.64
PFDN6-203ENST00000374610 TMC4Q7Z404 712 aa19.07■□□□□ 0.64
PFDN6-203ENST00000374610 MPHOSPH8Q99549 860 aa19.07■□□□□ 0.64
PFDN6-203ENST00000374610 LRRFIP2Q9Y608 721 aaKnown RBP19.07■□□□□ 0.64
PFDN6-203ENST00000374610 MYH3P11055 1940 aa19.07■□□□□ 0.64
PFDN6-203ENST00000374610 SRCAPQ6ZRS2 3230 aa19.06■□□□□ 0.64
PFDN6-203ENST00000374610 GNAI2P04899 355 aa19.06■□□□□ 0.64
PFDN6-203ENST00000374610 CSF1RP07333 972 aa19.06■□□□□ 0.64
PFDN6-203ENST00000374610 MVPQ14764 893 aaKnown RBP19.06■□□□□ 0.64
PFDN6-203ENST00000374610 CCDC93Q567U6 631 aa19.06■□□□□ 0.64
PFDN6-203ENST00000374610 CELF1Q92879 486 aaKnown RBP19.06■□□□□ 0.64
PFDN6-203ENST00000374610 DDX19BQ9UMR2 479 aa19.06■□□□□ 0.64
PFDN6-203ENST00000374610 BRCA1P38398 1863 aaKnown RBP19.05■□□□□ 0.64
PFDN6-203ENST00000374610 EPHA10Q5JZY3 1008 aa19.05■□□□□ 0.64
PFDN6-203ENST00000374610 CC2D2BQ6DHV5 1058 aa19.05■□□□□ 0.64
PFDN6-203ENST00000374610 SUPT16HQ9Y5B9 1047 aaKnown RBP19.05■□□□□ 0.64
PFDN6-203ENST00000374610 C20orf194Q5TEA3 1177 aa19.04■□□□□ 0.64
PFDN6-203ENST00000374610 RTKN2Q8IZC4 609 aa19.04■□□□□ 0.64
PFDN6-203ENST00000374610 ATP6V0A2Q9Y487 856 aa19.04■□□□□ 0.64
PFDN6-203ENST00000374610 SLX4Q8IY92 1834 aa19.04■□□□□ 0.64
PFDN6-203ENST00000374610 CENPBP07199 599 aaPredicted RBP19.03■□□□□ 0.64
PFDN6-203ENST00000374610 GRIPAP1Q4V328 841 aa19.03■□□□□ 0.64
PFDN6-203ENST00000374610 SP8Q8IXZ3 490 aa19.03■□□□□ 0.64
PFDN6-203ENST00000374610 RTL9Q8NET4 1388 aa19.03■□□□□ 0.64
PFDN6-203ENST00000374610 ZBTB7BO15156 539 aaPredicted RBP19.02■□□□□ 0.64
PFDN6-203ENST00000374610 KAZALD1Q96I82 304 aa19.02■□□□□ 0.64
PFDN6-203ENST00000374610 ANKIB1Q9P2G1 1089 aa19.02■□□□□ 0.64
PFDN6-203ENST00000374610 ARFGEF1Q9Y6D6 1849 aa19.02■□□□□ 0.63
PFDN6-203ENST00000374610 RABL6Q3YEC7 729 aaPredicted RBP19.01■□□□□ 0.63
PFDN6-203ENST00000374610 OLFM4Q6UX06 510 aa19.01■□□□□ 0.63
PFDN6-203ENST00000374610 DPP8Q6V1X1 898 aaPredicted RBP19.01■□□□□ 0.63
PFDN6-203ENST00000374610 ANKRD44Q8N8A2 993 aa19.01■□□□□ 0.63
PFDN6-203ENST00000374610 CNNM1Q9NRU3 951 aa19.01■□□□□ 0.63
PFDN6-203ENST00000374610 NSFL1CQ9UNZ2 370 aaKnown RBP19.01■□□□□ 0.63
PFDN6-203ENST00000374610 LDHAL6AQ6ZMR3 332 aa19■□□□□ 0.63
PFDN6-203ENST00000374610 MPNDQ8N594 471 aa19■□□□□ 0.63
PFDN6-203ENST00000374610 TAOK3Q9H2K8 898 aa19■□□□□ 0.63
PFDN6-203ENST00000374610 C1orf115Q9H7X2 142 aa19■□□□□ 0.63
PFDN6-203ENST00000374610 BSDC1Q9NW68 430 aaPredicted RBP19■□□□□ 0.63
PFDN6-203ENST00000374610 TAF1P21675 1872 aa18.99■□□□□ 0.63
PFDN6-203ENST00000374610 SRGAP3O43295 1099 aa18.99■□□□□ 0.63
PFDN6-203ENST00000374610 SUPT20HQ8NEM7 779 aa18.99■□□□□ 0.63
PFDN6-203ENST00000374610 C7orf43Q8WVR3 580 aa18.99■□□□□ 0.63
PFDN6-203ENST00000374610 ZNF594Q96JF6 807 aaPredicted RBP18.99■□□□□ 0.63
PFDN6-203ENST00000374610 C6orf229H3BNL8 230 aa18.97■□□□□ 0.63
PFDN6-203ENST00000374610 KCNJ4P48050 445 aa18.97■□□□□ 0.63
PFDN6-203ENST00000374610 FKBP4Q02790 459 aaKnown RBP eCLIP18.97■□□□□ 0.63
PFDN6-203ENST00000374610 RASSF7Q02833 373 aa18.97■□□□□ 0.63
PFDN6-203ENST00000374610 SPEF2Q9C093 1822 aa18.96■□□□□ 0.63
PFDN6-203ENST00000374610 ANKRD2Q9GZV1 360 aa18.96■□□□□ 0.63
PFDN6-203ENST00000374610 G3V3G9 751 aa18.95■□□□□ 0.62
PFDN6-203ENST00000374610 LMNB1P20700 586 aa18.95■□□□□ 0.62
PFDN6-203ENST00000374610 GPSM2P81274 684 aa18.95■□□□□ 0.62
PFDN6-203ENST00000374610 DCAF8Q5TAQ9 597 aa18.95■□□□□ 0.62
PFDN6-203ENST00000374610 KLHDC4Q8TBB5 520 aa18.95■□□□□ 0.62
PFDN6-203ENST00000374610 EYA3Q99504 573 aa18.95■□□□□ 0.62
PFDN6-203ENST00000374610 GGA1Q9UJY5 639 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms