RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 RPAP2Q8IXW5 612 aaPredicted RBP17.54■□□□□ 0.4
TCEA3-201ENST00000374601 PPP4R2Q9NY27 417 aa17.54■□□□□ 0.4
TCEA3-201ENST00000374601 ATF5Q9Y2D1 282 aaPredicted RBP17.54■□□□□ 0.4
TCEA3-201ENST00000374601 CSF1RP07333 972 aa17.53■□□□□ 0.4
TCEA3-201ENST00000374601 ST5P78524 1137 aa17.53■□□□□ 0.4
TCEA3-201ENST00000374601 POLA2Q14181 598 aa17.53■□□□□ 0.4
TCEA3-201ENST00000374601 TTLL11Q8NHH1 800 aa17.53■□□□□ 0.4
TCEA3-201ENST00000374601 SGIP1Q9BQI5 828 aa17.53■□□□□ 0.4
TCEA3-201ENST00000374601 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
TCEA3-201ENST00000374601 BRCA1P38398 1863 aaKnown RBP17.52■□□□□ 0.4
TCEA3-201ENST00000374601 NPHP1O15259 732 aa17.52■□□□□ 0.4
TCEA3-201ENST00000374601 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
TCEA3-201ENST00000374601 FAM161AQ3B820 660 aa17.52■□□□□ 0.4
TCEA3-201ENST00000374601 SSH3Q8TE77 659 aa17.52■□□□□ 0.4
TCEA3-201ENST00000374601 SRGAP3O43295 1099 aa17.51■□□□□ 0.39
TCEA3-201ENST00000374601 PTGER2P43116 358 aa17.51■□□□□ 0.39
TCEA3-201ENST00000374601 RFX5P48382 616 aaPredicted RBP17.51■□□□□ 0.39
TCEA3-201ENST00000374601 HDAC1Q13547 482 aaPredicted RBP17.51■□□□□ 0.39
TCEA3-201ENST00000374601 SF3B3Q15393 1217 aaKnown RBP17.51■□□□□ 0.39
TCEA3-201ENST00000374601 CCDC85AQ96PX6 553 aaPredicted RBP17.51■□□□□ 0.39
TCEA3-201ENST00000374601 LRRC37AA6NMS7 1700 aa17.5■□□□□ 0.39
TCEA3-201ENST00000374601 IGHDP01880 384 aa17.5■□□□□ 0.39
TCEA3-201ENST00000374601 GREM2Q9H772 168 aa17.5■□□□□ 0.39
TCEA3-201ENST00000374601 KLRG2A4D1S0 409 aaPredicted RBP17.49■□□□□ 0.39
TCEA3-201ENST00000374601 CRY2Q49AN0 593 aa17.49■□□□□ 0.39
TCEA3-201ENST00000374601 B4GALNT3Q6L9W6 998 aa17.49■□□□□ 0.39
TCEA3-201ENST00000374601 NLRP3Q96P20 1036 aa17.49■□□□□ 0.39
TCEA3-201ENST00000374601 BRIP1Q9BX63 1249 aa17.49■□□□□ 0.39
TCEA3-201ENST00000374601 CHMP3Q9Y3E7 222 aa17.49■□□□□ 0.39
TCEA3-201ENST00000374601 HMMRO75330 724 aa17.48■□□□□ 0.39
TCEA3-201ENST00000374601 POLD1P28340 1107 aa17.48■□□□□ 0.39
TCEA3-201ENST00000374601 CCDC152Q4G0S7 254 aa17.48■□□□□ 0.39
TCEA3-201ENST00000374601 CCDC136Q96JN2 1154 aa17.48■□□□□ 0.39
TCEA3-201ENST00000374601 KDM2BQ8NHM5 1336 aa17.47■□□□□ 0.39
TCEA3-201ENST00000374601 KLHDC4Q8TBB5 520 aa17.47■□□□□ 0.39
TCEA3-201ENST00000374601 RWDD1Q9H446 243 aaPredicted RBP17.47■□□□□ 0.39
TCEA3-201ENST00000374601 SEC31BQ9NQW1 1179 aa17.47■□□□□ 0.39
TCEA3-201ENST00000374601 ITGA6P23229 1130 aa17.46■□□□□ 0.39
TCEA3-201ENST00000374601 PTPN12Q05209 780 aaKnown RBP17.46■□□□□ 0.39
TCEA3-201ENST00000374601 IFIT5Q13325 482 aaKnown RBP17.46■□□□□ 0.39
TCEA3-201ENST00000374601 ZNF594Q96JF6 807 aaPredicted RBP17.46■□□□□ 0.39
TCEA3-201ENST00000374601 COPRSQ9NQ92 184 aa17.46■□□□□ 0.39
TCEA3-201ENST00000374601 PA2G4Q9UQ80 394 aaKnown RBP17.46■□□□□ 0.39
TCEA3-201ENST00000374601 SLX4Q8IY92 1834 aa17.46■□□□□ 0.39
TCEA3-201ENST00000374601 ANKRD18BA2A2Z9 1011 aa17.45■□□□□ 0.38
TCEA3-201ENST00000374601 CCDC57Q2TAC2 916 aa17.45■□□□□ 0.38
TCEA3-201ENST00000374601 DCTPP1Q9H773 170 aa17.45■□□□□ 0.38
TCEA3-201ENST00000374601 SPON1Q9HCB6 807 aa17.45■□□□□ 0.38
TCEA3-201ENST00000374601 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
TCEA3-201ENST00000374601 HOXA10P31260 410 aaPredicted RBP17.44■□□□□ 0.38
TCEA3-201ENST00000374601 PDE6BP35913 854 aa17.44■□□□□ 0.38
TCEA3-201ENST00000374601 NOP58Q9Y2X3 529 aaKnown RBP17.44■□□□□ 0.38
TCEA3-201ENST00000374601 ARAP2Q8WZ64 1704 aa17.44■□□□□ 0.38
TCEA3-201ENST00000374601 SRGNP10124 158 aa17.43■□□□□ 0.38
TCEA3-201ENST00000374601 SMC5Q8IY18 1101 aa17.43■□□□□ 0.38
TCEA3-201ENST00000374601 RPGRQ92834 1020 aaKnown RBP17.43■□□□□ 0.38
TCEA3-201ENST00000374601 EXOC6BQ9Y2D4 811 aa17.43■□□□□ 0.38
TCEA3-201ENST00000374601 SURF6O75683 361 aaKnown RBP17.42■□□□□ 0.38
TCEA3-201ENST00000374601 C2CD5Q86YS7 1000 aa17.42■□□□□ 0.38
TCEA3-201ENST00000374601 CELF1Q92879 486 aaKnown RBP17.42■□□□□ 0.38
TCEA3-201ENST00000374601 PUS3Q9BZE2 481 aaKnown RBP17.42■□□□□ 0.38
TCEA3-201ENST00000374601 SIL1Q9H173 461 aa17.42■□□□□ 0.38
TCEA3-201ENST00000374601 NPR1P16066 1061 aa17.41■□□□□ 0.38
TCEA3-201ENST00000374601 CHRNA5P30532 468 aa17.41■□□□□ 0.38
TCEA3-201ENST00000374601 DDX46Q7L014 1031 aaKnown RBP17.41■□□□□ 0.38
TCEA3-201ENST00000374601 CENPQQ7L2Z9 268 aaPredicted RBP17.41■□□□□ 0.38
TCEA3-201ENST00000374601 ATG9AQ7Z3C6 839 aa17.41■□□□□ 0.38
TCEA3-201ENST00000374601 CDC5LQ99459 802 aaKnown RBP17.41■□□□□ 0.38
TCEA3-201ENST00000374601 EYA2O00167 538 aa17.4■□□□□ 0.38
TCEA3-201ENST00000374601 GRAPQ13588 217 aa17.4■□□□□ 0.38
TCEA3-201ENST00000374601 LRRC24Q50LG9 513 aa17.4■□□□□ 0.38
TCEA3-201ENST00000374601 TAF7LQ5H9L4 462 aa17.4■□□□□ 0.38
TCEA3-201ENST00000374601 GRAPLQ8TC17 118 aaPredicted RBP17.4■□□□□ 0.38
TCEA3-201ENST00000374601 GCC1Q96CN9 775 aa17.4■□□□□ 0.38
TCEA3-201ENST00000374601 RBM17Q96I25 401 aaKnown RBP17.4■□□□□ 0.38
TCEA3-201ENST00000374601 CRAMP1Q96RY5 1269 aa17.4■□□□□ 0.38
TCEA3-201ENST00000374601 PDZRN3Q9UPQ7 1066 aa17.4■□□□□ 0.38
TCEA3-201ENST00000374601 ARFGEF1Q9Y6D6 1849 aa17.4■□□□□ 0.38
TCEA3-201ENST00000374601 H0YIN7 160 aa17.39■□□□□ 0.37
TCEA3-201ENST00000374601 CIAO1O76071 339 aa17.39■□□□□ 0.37
TCEA3-201ENST00000374601 STYK1Q6J9G0 422 aa17.39■□□□□ 0.37
TCEA3-201ENST00000374601 SLC51AQ86UW1 340 aa17.39■□□□□ 0.37
TCEA3-201ENST00000374601 ANKRD18AQ8IVF6 992 aa17.39■□□□□ 0.37
TCEA3-201ENST00000374601 MASTLQ96GX5 879 aa17.39■□□□□ 0.37
TCEA3-201ENST00000374601 FBXO3Q9UK99 471 aa17.39■□□□□ 0.37
TCEA3-201ENST00000374601 SASH1O94885 1247 aa17.38■□□□□ 0.37
TCEA3-201ENST00000374601 DPEP1P16444 411 aa17.38■□□□□ 0.37
TCEA3-201ENST00000374601 IGHMBP2P38935 993 aaKnown RBP17.38■□□□□ 0.37
TCEA3-201ENST00000374601 RPS8P62241 208 aaKnown RBP17.38■□□□□ 0.37
TCEA3-201ENST00000374601 LDHAL6AQ6ZMR3 332 aa17.38■□□□□ 0.37
TCEA3-201ENST00000374601 RIPOR2Q9Y4F9 1068 aa17.38■□□□□ 0.37
TCEA3-201ENST00000374601 CD2APQ9Y5K6 639 aa17.38■□□□□ 0.37
TCEA3-201ENST00000374601 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.38■□□□□ 0.37
TCEA3-201ENST00000374601 APBB1O00213 710 aa17.37■□□□□ 0.37
TCEA3-201ENST00000374601 KCNA3P22001 575 aa17.37■□□□□ 0.37
TCEA3-201ENST00000374601 G3BP1Q13283 466 aaKnown RBP eCLIP17.37■□□□□ 0.371e-6■■■□□ 15
TCEA3-201ENST00000374601 OS9Q13438 667 aaPredicted RBP17.37■□□□□ 0.37
TCEA3-201ENST00000374601 HSP90AB4PQ58FF6 505 aa17.37■□□□□ 0.37
TCEA3-201ENST00000374601 A0A0G2JLW4 131 aa17.36■□□□□ 0.37
TCEA3-201ENST00000374601 RAB11FIP3O75154 756 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms