RNA–Protein interactions for RNA: ENST00000374454.1

PDZD11-202, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZD11, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-202ENST00000374454 RABL6Q3YEC7 729 aaPredicted RBP12.47□□□□□ -0.41
PDZD11-202ENST00000374454 CCDC152Q4G0S7 254 aa12.47□□□□□ -0.41
PDZD11-202ENST00000374454 EPHA10Q5JZY3 1008 aa12.47□□□□□ -0.41
PDZD11-202ENST00000374454 KLHL34Q8N239 644 aa12.47□□□□□ -0.41
PDZD11-202ENST00000374454 CRAMP1Q96RY5 1269 aa12.47□□□□□ -0.41
PDZD11-202ENST00000374454 RTL9Q8NET4 1388 aa12.46□□□□□ -0.41
PDZD11-202ENST00000374454 ALDH1B1P30837 517 aa12.46□□□□□ -0.41
PDZD11-202ENST00000374454 DDX46Q7L014 1031 aaKnown RBP12.46□□□□□ -0.41
PDZD11-202ENST00000374454 NLGN2Q8NFZ4 835 aa12.46□□□□□ -0.41
PDZD11-202ENST00000374454 RPGRQ92834 1020 aaKnown RBP12.46□□□□□ -0.41
PDZD11-202ENST00000374454 CNKSR1Q969H4 720 aa12.46□□□□□ -0.41
PDZD11-202ENST00000374454 RBM17Q96I25 401 aaKnown RBP12.46□□□□□ -0.41
PDZD11-202ENST00000374454 ZBTB40Q9NUA8 1239 aa12.46□□□□□ -0.41
PDZD11-202ENST00000374454 ANKRD31Q8N7Z5 1873 aa12.45□□□□□ -0.42
PDZD11-202ENST00000374454 LMBR1LQ6UX01 489 aa12.45□□□□□ -0.42
PDZD11-202ENST00000374454 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
PDZD11-202ENST00000374454 ZNF622Q969S3 477 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDZD11-202ENST00000374454 BICC1Q9H694 974 aaKnown RBP12.45□□□□□ -0.42
PDZD11-202ENST00000374454 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
PDZD11-202ENST00000374454 LRRFIP2Q9Y608 721 aaKnown RBP12.45□□□□□ -0.42
PDZD11-202ENST00000374454 BBOX1O75936 387 aa12.44□□□□□ -0.42
PDZD11-202ENST00000374454 MTX1Q13505 466 aa12.44□□□□□ -0.42
PDZD11-202ENST00000374454 AAMPQ13685 434 aa12.44□□□□□ -0.42
PDZD11-202ENST00000374454 TTLL6Q8N841 843 aa12.44□□□□□ -0.42
PDZD11-202ENST00000374454 GREM2Q9H772 168 aa12.44□□□□□ -0.42
PDZD11-202ENST00000374454 DDX60Q8IY21 1712 aaKnown RBP12.44□□□□□ -0.42
PDZD11-202ENST00000374454 TNRC6CQ9HCJ0 1690 aaKnown RBP12.43□□□□□ -0.42
PDZD11-202ENST00000374454 GRAPQ13588 217 aa12.43□□□□□ -0.42
PDZD11-202ENST00000374454 GRAPLQ8TC17 118 aaPredicted RBP12.43□□□□□ -0.42
PDZD11-202ENST00000374454 CRBNQ96SW2 442 aa12.43□□□□□ -0.42
PDZD11-202ENST00000374454 CDC5LQ99459 802 aaKnown RBP12.43□□□□□ -0.42
PDZD11-202ENST00000374454 LAMB2P55268 1798 aa12.43□□□□□ -0.42
PDZD11-202ENST00000374454 ANKRD18BA2A2Z9 1011 aa12.42□□□□□ -0.42
PDZD11-202ENST00000374454 ITGA6P23229 1130 aa12.42□□□□□ -0.42
PDZD11-202ENST00000374454 RPS8P62241 208 aaKnown RBP12.42□□□□□ -0.42
PDZD11-202ENST00000374454 IFIT5Q13325 482 aaKnown RBP12.42□□□□□ -0.42
PDZD11-202ENST00000374454 CCDC57Q2TAC2 916 aa12.42□□□□□ -0.42
PDZD11-202ENST00000374454 FAM161AQ3B820 660 aa12.42□□□□□ -0.42
PDZD11-202ENST00000374454 DALRD3Q5D0E6 543 aaKnown RBP12.42□□□□□ -0.42
PDZD11-202ENST00000374454 TMC4Q7Z404 712 aa12.42□□□□□ -0.42
PDZD11-202ENST00000374454 CCDC85AQ96PX6 553 aaPredicted RBP12.42□□□□□ -0.42
PDZD11-202ENST00000374454 SEC31BQ9NQW1 1179 aa12.42□□□□□ -0.42
PDZD11-202ENST00000374454 ATP8B2P98198 1209 aa12.41□□□□□ -0.42
PDZD11-202ENST00000374454 PRPF40BQ6NWY9 871 aaKnown RBP12.41□□□□□ -0.42
PDZD11-202ENST00000374454 RPAP2Q8IXW5 612 aaPredicted RBP12.41□□□□□ -0.42
PDZD11-202ENST00000374454 C7orf43Q8WVR3 580 aa12.41□□□□□ -0.42
PDZD11-202ENST00000374454 CELF1Q92879 486 aaKnown RBP12.41□□□□□ -0.42
PDZD11-202ENST00000374454 KIAA1551Q9HCM1 1747 aa12.41□□□□□ -0.42
PDZD11-202ENST00000374454 CHMP3Q9Y3E7 222 aa12.41□□□□□ -0.42
PDZD11-202ENST00000374454 IGHMBP2P38935 993 aaKnown RBP12.4□□□□□ -0.42
PDZD11-202ENST00000374454 RFX5P48382 616 aaPredicted RBP12.4□□□□□ -0.42
PDZD11-202ENST00000374454 CC2D2BQ6DHV5 1058 aa12.4□□□□□ -0.42
PDZD11-202ENST00000374454 CEP85Q6P2H3 762 aa12.4□□□□□ -0.42
PDZD11-202ENST00000374454 ANKRD18AQ8IVF6 992 aa12.4□□□□□ -0.42
PDZD11-202ENST00000374454 SP8Q8IXZ3 490 aa12.4□□□□□ -0.42
PDZD11-202ENST00000374454 C1orf115Q9H7X2 142 aa12.4□□□□□ -0.42
PDZD11-202ENST00000374454 BSDC1Q9NW68 430 aaPredicted RBP12.4□□□□□ -0.42
PDZD11-202ENST00000374454 PPEF1O14829 653 aaPredicted RBP12.39□□□□□ -0.43
PDZD11-202ENST00000374454 SRGAP3O43295 1099 aa12.39□□□□□ -0.43
PDZD11-202ENST00000374454 GRIPAP1Q4V328 841 aa12.39□□□□□ -0.43
PDZD11-202ENST00000374454 SOGA3Q5TF21 947 aa12.39□□□□□ -0.43
PDZD11-202ENST00000374454 SSH3Q8TE77 659 aa12.39□□□□□ -0.43
PDZD11-202ENST00000374454 COPRSQ9NQ92 184 aa12.39□□□□□ -0.43
PDZD11-202ENST00000374454 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
PDZD11-202ENST00000374454 BCS1LQ9Y276 419 aa12.39□□□□□ -0.43
PDZD11-202ENST00000374454 ATP6V0A2Q9Y487 856 aa12.39□□□□□ -0.43
PDZD11-202ENST00000374454 COL11A2P13942 1736 aaPredicted RBP12.39□□□□□ -0.43
PDZD11-202ENST00000374454 DLEC1Q9Y238 1755 aa12.38□□□□□ -0.43
PDZD11-202ENST00000374454 PTPN12Q05209 780 aaKnown RBP12.38□□□□□ -0.43
PDZD11-202ENST00000374454 POLA2Q14181 598 aa12.38□□□□□ -0.43
PDZD11-202ENST00000374454 TAF7LQ5H9L4 462 aa12.38□□□□□ -0.43
PDZD11-202ENST00000374454 EXOC6Q8TAG9 804 aa12.38□□□□□ -0.43
PDZD11-202ENST00000374454 MPHOSPH8Q99549 860 aa12.38□□□□□ -0.43
PDZD11-202ENST00000374454 TMX4Q9H1E5 349 aaPredicted RBP12.38□□□□□ -0.43
PDZD11-202ENST00000374454 MYH3P11055 1940 aa12.38□□□□□ -0.43
PDZD11-202ENST00000374454 PNMA6EA0A0J9YXQ4 647 aa12.37□□□□□ -0.43
PDZD11-202ENST00000374454 C21orf2O43822 256 aa12.37□□□□□ -0.43
PDZD11-202ENST00000374454 LDHAL6AQ6ZMR3 332 aa12.37□□□□□ -0.43
PDZD11-202ENST00000374454 SIRT2Q8IXJ6 389 aa12.37□□□□□ -0.43
PDZD11-202ENST00000374454 GOLGB1Q14789 3259 aaKnown RBP12.36□□□□□ -0.43
PDZD11-202ENST00000374454 GRIN3BO60391 1043 aa12.36□□□□□ -0.43
PDZD11-202ENST00000374454 HMMRO75330 724 aa12.36□□□□□ -0.43
PDZD11-202ENST00000374454 CIAO1O76071 339 aa12.36□□□□□ -0.43
PDZD11-202ENST00000374454 CCDC93Q567U6 631 aa12.36□□□□□ -0.43
PDZD11-202ENST00000374454 RTKN2Q8IZC4 609 aa12.36□□□□□ -0.43
PDZD11-202ENST00000374454 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
PDZD11-202ENST00000374454 MINPP1Q9UNW1 487 aa12.36□□□□□ -0.43
PDZD11-202ENST00000374454 NOP58Q9Y2X3 529 aaKnown RBP12.36□□□□□ -0.43
PDZD11-202ENST00000374454 RIPOR2Q9Y4F9 1068 aa12.36□□□□□ -0.43
PDZD11-202ENST00000374454 PCDHB15Q9Y5E8 787 aa12.36□□□□□ -0.43
PDZD11-202ENST00000374454 BRCA1P38398 1863 aaKnown RBP12.36□□□□□ -0.43
PDZD11-202ENST00000374454 SLX4Q8IY92 1834 aa12.35□□□□□ -0.43
PDZD11-202ENST00000374454 EYA2O00167 538 aa12.35□□□□□ -0.43
PDZD11-202ENST00000374454 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
PDZD11-202ENST00000374454 IRX6P78412 446 aaPredicted RBP12.35□□□□□ -0.43
PDZD11-202ENST00000374454 GPR162Q16538 588 aa12.35□□□□□ -0.43
PDZD11-202ENST00000374454 ANKRD2Q9GZV1 360 aa12.35□□□□□ -0.43
PDZD11-202ENST00000374454 CNNM1Q9NRU3 951 aa12.35□□□□□ -0.43
PDZD11-202ENST00000374454 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
PDZD11-202ENST00000374454 WWC3Q9ULE0 1092 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms