RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 TTC12Q9H892 705 aaPredicted RBP13.52□□□□□ -0.25
PTPN20-204ENST00000374346 U3KPZ7 1027 aaPredicted RBP13.52□□□□□ -0.25
PTPN20-204ENST00000374346 TAF5LO75529 589 aa13.51□□□□□ -0.25
PTPN20-204ENST00000374346 USPL1Q5W0Q7 1092 aa13.51□□□□□ -0.25
PTPN20-204ENST00000374346 KRT28Q7Z3Y7 464 aa13.51□□□□□ -0.25
PTPN20-204ENST00000374346 MYRIPQ8NFW9 859 aa13.51□□□□□ -0.25
PTPN20-204ENST00000374346 ZNF830Q96NB3 372 aaPredicted RBP13.51□□□□□ -0.25
PTPN20-204ENST00000374346 NEK1Q96PY6 1258 aa13.51□□□□□ -0.25
PTPN20-204ENST00000374346 AXIN2Q9Y2T1 843 aa13.51□□□□□ -0.25
PTPN20-204ENST00000374346 RGPD5Q99666 1765 aa13.51□□□□□ -0.25
PTPN20-204ENST00000374346 KIF1AQ12756 1690 aa13.51□□□□□ -0.25
PTPN20-204ENST00000374346 SNRPA1P09661 255 aaKnown RBP13.51□□□□□ -0.25
PTPN20-204ENST00000374346 CHAF1AQ13111 956 aaPredicted RBP13.51□□□□□ -0.25
PTPN20-204ENST00000374346 TOB2Q14106 344 aaPredicted RBP13.51□□□□□ -0.25
PTPN20-204ENST00000374346 TNNI3KQ59H18 835 aa13.51□□□□□ -0.25
PTPN20-204ENST00000374346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN20-204ENST00000374346 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.51□□□□□ -0.25
PTPN20-204ENST00000374346 FPGT-TNNI3KV9GXZ4 949 aa13.51□□□□□ -0.25
PTPN20-204ENST00000374346 AFDNP55196 1824 aaKnown RBP13.51□□□□□ -0.25
PTPN20-204ENST00000374346 C5P01031 1676 aa13.51□□□□□ -0.25
PTPN20-204ENST00000374346 HMGB1P09429 215 aaKnown RBP13.5□□□□□ -0.25
PTPN20-204ENST00000374346 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 ZNF589Q86UQ0 364 aaPredicted RBP13.5□□□□□ -0.25
PTPN20-204ENST00000374346 KLHDC4Q8TBB5 520 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 SPTLC3Q9NUV7 552 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 CFAP45Q9UL16 551 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
PTPN20-204ENST00000374346 H3BQV1 296 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 HSP90B1P14625 803 aaKnown RBP13.5□□□□□ -0.25
PTPN20-204ENST00000374346 FGD1P98174 961 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 IFFO2Q5TF58 517 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 IFNL2Q8IZJ0 200 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 NFATC2IPQ8NCF5 419 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 TCEANC2Q96MN5 208 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 ZSCAN16Q9H4T2 348 aaPredicted RBP13.5□□□□□ -0.25
PTPN20-204ENST00000374346 NLRP2Q9NX02 1062 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
PTPN20-204ENST00000374346 COL15A1P39059 1388 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 CAVIN2O95810 425 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 TYRO3Q06418 890 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 STK3Q13188 491 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 MCMDC2Q4G0Z9 681 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 MPNDQ8N594 471 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 GTF3C6Q969F1 213 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 CHMP3Q9Y3E7 222 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 PLEKHG2Q9H7P9 1386 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 PHKG2P15735 406 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 TICAM2Q86XR7 235 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 CHMP4CQ96CF2 233 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 FMNL2Q96PY5 1086 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 DACT1Q9NYF0 836 aa13.49□□□□□ -0.25
PTPN20-204ENST00000374346 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
PTPN20-204ENST00000374346 TFCP2Q12800 502 aa13.48□□□□□ -0.25
PTPN20-204ENST00000374346 CAMK4Q16566 473 aa13.48□□□□□ -0.25
PTPN20-204ENST00000374346 RABL6Q3YEC7 729 aaPredicted RBP13.48□□□□□ -0.25
PTPN20-204ENST00000374346 BICD2Q8TD16 824 aa13.48□□□□□ -0.25
PTPN20-204ENST00000374346 LEO1Q8WVC0 666 aaPredicted RBP13.48□□□□□ -0.25
PTPN20-204ENST00000374346 PTPN12Q05209 780 aaKnown RBP13.48□□□□□ -0.25
PTPN20-204ENST00000374346 EPHA10Q5JZY3 1008 aa13.48□□□□□ -0.25
PTPN20-204ENST00000374346 ZNF496Q96IT1 587 aaPredicted RBP13.48□□□□□ -0.25
PTPN20-204ENST00000374346 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
PTPN20-204ENST00000374346 DNAJC2Q99543 621 aaKnown RBP13.48□□□□□ -0.25
PTPN20-204ENST00000374346 HAUS7Q99871 368 aa13.48□□□□□ -0.25
PTPN20-204ENST00000374346 LLPHQ9BRT6 129 aaKnown RBP13.48□□□□□ -0.25
PTPN20-204ENST00000374346 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
PTPN20-204ENST00000374346 MST1RQ04912 1400 aa13.47□□□□□ -0.25
PTPN20-204ENST00000374346 LIG1P18858 919 aa13.47□□□□□ -0.25
PTPN20-204ENST00000374346 ZC3H6P61129 1189 aaKnown RBP13.47□□□□□ -0.25
PTPN20-204ENST00000374346 UBE3BQ7Z3V4 1068 aa13.47□□□□□ -0.25
PTPN20-204ENST00000374346 MRVI1Q9Y6F6 885 aa13.47□□□□□ -0.25
PTPN20-204ENST00000374346 DTNBO60941 627 aa13.47□□□□□ -0.25
PTPN20-204ENST00000374346 FAM173BQ6P4H8 233 aa13.47□□□□□ -0.25
PTPN20-204ENST00000374346 Q6ZUG5 572 aa13.47□□□□□ -0.25
PTPN20-204ENST00000374346 KIAA1524Q8TCG1 905 aa13.47□□□□□ -0.25
PTPN20-204ENST00000374346 CLSTN2Q9H4D0 955 aa13.47□□□□□ -0.25
PTPN20-204ENST00000374346 TFIP11Q9UBB9 837 aaKnown RBP13.47□□□□□ -0.25
PTPN20-204ENST00000374346 ABCC6O95255 1503 aa13.46□□□□□ -0.25
PTPN20-204ENST00000374346 A0A087WZG4 1122 aa13.46□□□□□ -0.25
PTPN20-204ENST00000374346 GTF2F1P35269 517 aaKnown RBP eCLIP13.46□□□□□ -0.25
PTPN20-204ENST00000374346 RFX5P48382 616 aaPredicted RBP13.46□□□□□ -0.25
PTPN20-204ENST00000374346 CSB-PGBD3P0DP91 1061 aa13.46□□□□□ -0.26
PTPN20-204ENST00000374346 ANO6Q4KMQ2 910 aa13.46□□□□□ -0.26
PTPN20-204ENST00000374346 RBM43Q6ZSC3 357 aaKnown RBP13.46□□□□□ -0.26
PTPN20-204ENST00000374346 SPC24Q8NBT2 197 aa13.46□□□□□ -0.26
PTPN20-204ENST00000374346 EDC3Q96F86 508 aaKnown RBP13.46□□□□□ -0.26
PTPN20-204ENST00000374346 ARFGEF2Q9Y6D5 1785 aa13.45□□□□□ -0.26
PTPN20-204ENST00000374346 SH3TC1Q8TE82 1336 aa13.45□□□□□ -0.26
PTPN20-204ENST00000374346 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
PTPN20-204ENST00000374346 DRC7Q8IY82 874 aa13.45□□□□□ -0.26
PTPN20-204ENST00000374346 CKAP2LQ8IYA6 745 aa13.45□□□□□ -0.26
PTPN20-204ENST00000374346 KBTBD3Q8NAB2 608 aa13.45□□□□□ -0.26
PTPN20-204ENST00000374346 PLBD2Q8NHP8 589 aa13.45□□□□□ -0.26
PTPN20-204ENST00000374346 BRF1Q92994 677 aa13.45□□□□□ -0.26
PTPN20-204ENST00000374346 HELLSQ9NRZ9 838 aa13.45□□□□□ -0.26
PTPN20-204ENST00000374346 USP16Q9Y5T5 823 aa13.45□□□□□ -0.26
PTPN20-204ENST00000374346 TAF6LQ9Y6J9 622 aa13.45□□□□□ -0.26
PTPN20-204ENST00000374346 ZNF609O15014 1411 aa13.44□□□□□ -0.26
PTPN20-204ENST00000374346 CTAGE5O15320 804 aa13.44□□□□□ -0.26
PTPN20-204ENST00000374346 CYP21A2P08686 494 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms