RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 RABEP1Q15276 862 aa20.53■□□□□ 0.88
PTPN20-203ENST00000374342 SPRYD3Q8NCJ5 442 aa20.53■□□□□ 0.88
PTPN20-203ENST00000374342 BOLA2Q9H3K6 86 aa20.53■□□□□ 0.88
PTPN20-203ENST00000374342 SPEF2Q9C093 1822 aa20.53■□□□□ 0.88
PTPN20-203ENST00000374342 CIAO1O76071 339 aa20.53■□□□□ 0.88
PTPN20-203ENST00000374342 CTSWP56202 376 aa20.53■□□□□ 0.88
PTPN20-203ENST00000374342 TAF7LQ5H9L4 462 aa20.53■□□□□ 0.88
PTPN20-203ENST00000374342 DBNDD2Q9BQY9 259 aa20.53■□□□□ 0.88
PTPN20-203ENST00000374342 PUS3Q9BZE2 481 aaKnown RBP20.53■□□□□ 0.88
PTPN20-203ENST00000374342 CSF1RP07333 972 aa20.52■□□□□ 0.88
PTPN20-203ENST00000374342 BRWD3Q6RI45 1802 aa20.52■□□□□ 0.88
PTPN20-203ENST00000374342 SGSM2O43147 1006 aa20.51■□□□□ 0.87
PTPN20-203ENST00000374342 CD2BP2O95400 341 aaKnown RBP20.51■□□□□ 0.87
PTPN20-203ENST00000374342 MCCP23508 829 aa20.51■□□□□ 0.87
PTPN20-203ENST00000374342 IFIT5Q13325 482 aaKnown RBP20.51■□□□□ 0.87
PTPN20-203ENST00000374342 CWC27Q6UX04 472 aaKnown RBP20.51■□□□□ 0.87
PTPN20-203ENST00000374342 LRP5O75197 1615 aa20.51■□□□□ 0.87
PTPN20-203ENST00000374342 CNTNAP4Q9C0A0 1308 aa20.5■□□□□ 0.87
PTPN20-203ENST00000374342 FAM177BA6PVY3 158 aa20.5■□□□□ 0.87
PTPN20-203ENST00000374342 SEPT12Q8IYM1 358 aa20.5■□□□□ 0.87
PTPN20-203ENST00000374342 GREM2Q9H772 168 aa20.5■□□□□ 0.87
PTPN20-203ENST00000374342 RIC1Q4ADV7 1423 aa20.5■□□□□ 0.87
PTPN20-203ENST00000374342 ATP5JP18859 108 aa20.49■□□□□ 0.87
PTPN20-203ENST00000374342 TTLL11Q8NHH1 800 aa20.49■□□□□ 0.87
PTPN20-203ENST00000374342 NEUROD6Q96NK8 337 aa20.49■□□□□ 0.87
PTPN20-203ENST00000374342 FSD1Q9BTV5 496 aa20.49■□□□□ 0.87
PTPN20-203ENST00000374342 GPR108Q9NPR9 543 aa20.49■□□□□ 0.87
PTPN20-203ENST00000374342 PDE8AO60658 829 aa20.49■□□□□ 0.87
PTPN20-203ENST00000374342 SUSD4Q5VX71 490 aa20.49■□□□□ 0.87
PTPN20-203ENST00000374342 RUFY2Q8WXA3 655 aa20.49■□□□□ 0.87
PTPN20-203ENST00000374342 ITGA6P23229 1130 aa20.48■□□□□ 0.87
PTPN20-203ENST00000374342 FBXO3Q9UK99 471 aa20.48■□□□□ 0.87
PTPN20-203ENST00000374342 NIP7Q9Y221 180 aaKnown RBP eCLIP20.48■□□□□ 0.87
PTPN20-203ENST00000374342 ZNF652Q9Y2D9 606 aa20.48■□□□□ 0.87
PTPN20-203ENST00000374342 SH3TC1Q8TE82 1336 aa20.48■□□□□ 0.87
PTPN20-203ENST00000374342 RAD50Q92878 1312 aa20.48■□□□□ 0.87
PTPN20-203ENST00000374342 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
PTPN20-203ENST00000374342 C4BP0C0L5 1744 aa20.47■□□□□ 0.87
PTPN20-203ENST00000374342 K7ELQ4 463 aaPredicted RBP20.47■□□□□ 0.87
PTPN20-203ENST00000374342 PARP10Q53GL7 1025 aa20.47■□□□□ 0.87
PTPN20-203ENST00000374342 UTP14AQ9BVJ6 771 aaKnown RBP20.47■□□□□ 0.87
PTPN20-203ENST00000374342 ANTXR1Q9H6X2 564 aa20.47■□□□□ 0.87
PTPN20-203ENST00000374342 CEP126Q9P2H0 1117 aa20.47■□□□□ 0.87
PTPN20-203ENST00000374342 CCNL1Q9UK58 526 aaPredicted RBP20.47■□□□□ 0.87
PTPN20-203ENST00000374342 ANKRD18BA2A2Z9 1011 aa20.47■□□□□ 0.87
PTPN20-203ENST00000374342 ONECUT3O60422 494 aaPredicted RBP20.47■□□□□ 0.87
PTPN20-203ENST00000374342 DNAJC2Q99543 621 aaKnown RBP20.47■□□□□ 0.87
PTPN20-203ENST00000374342 PALD1Q9ULE6 856 aa20.47■□□□□ 0.87
PTPN20-203ENST00000374342 A0A1B0GUL7 405 aa20.46■□□□□ 0.87
PTPN20-203ENST00000374342 HIP1O00291 1037 aa20.46■□□□□ 0.87
PTPN20-203ENST00000374342 EDC3Q96F86 508 aaKnown RBP20.46■□□□□ 0.87
PTPN20-203ENST00000374342 QTRT2Q9H974 415 aaKnown RBP20.46■□□□□ 0.87
PTPN20-203ENST00000374342 NDUFB9Q9Y6M9 179 aa20.46■□□□□ 0.87
PTPN20-203ENST00000374342 TIMM10P62072 90 aa20.45■□□□□ 0.86
PTPN20-203ENST00000374342 NMIQ13287 307 aaPredicted RBP20.45■□□□□ 0.86
PTPN20-203ENST00000374342 KIAA1211Q6ZU35 1233 aa20.45■□□□□ 0.86
PTPN20-203ENST00000374342 LSG1Q9H089 658 aaKnown RBP20.45■□□□□ 0.86
PTPN20-203ENST00000374342 COL24A1Q17RW2 1714 aa20.45■□□□□ 0.86
PTPN20-203ENST00000374342 ARAP2Q8WZ64 1704 aa20.45■□□□□ 0.86
PTPN20-203ENST00000374342 EPB41L2O43491 1005 aaKnown RBP20.45■□□□□ 0.86
PTPN20-203ENST00000374342 HCLS1P14317 486 aaPredicted RBP20.45■□□□□ 0.86
PTPN20-203ENST00000374342 NTSR2O95665 410 aa20.44■□□□□ 0.86
PTPN20-203ENST00000374342 AK7Q96M32 723 aa20.44■□□□□ 0.86
PTPN20-203ENST00000374342 FAM227BQ96M60 508 aa20.44■□□□□ 0.86
PTPN20-203ENST00000374342 HAUS7Q99871 368 aa20.44■□□□□ 0.86
PTPN20-203ENST00000374342 ST18O60284 1047 aa20.43■□□□□ 0.86
PTPN20-203ENST00000374342 ANAPC15P60006 121 aa20.43■□□□□ 0.86
PTPN20-203ENST00000374342 LDHAL6AQ6ZMR3 332 aa20.43■□□□□ 0.86
PTPN20-203ENST00000374342 RFX7Q2KHR2 1363 aa20.43■□□□□ 0.86
PTPN20-203ENST00000374342 GNPATO15228 680 aa20.43■□□□□ 0.86
PTPN20-203ENST00000374342 METTL24Q5JXM2 366 aa20.43■□□□□ 0.86
PTPN20-203ENST00000374342 RC3H1Q5TC82 1133 aaKnown RBP20.43■□□□□ 0.86
PTPN20-203ENST00000374342 SMIM5Q71RC9 77 aa20.43■□□□□ 0.86
PTPN20-203ENST00000374342 CNNM1Q9NRU3 951 aa20.43■□□□□ 0.86
PTPN20-203ENST00000374342 AKAP2Q9Y2D5 859 aa20.43■□□□□ 0.86
PTPN20-203ENST00000374342 A0A0D9SFI3 127 aa20.42■□□□□ 0.86
PTPN20-203ENST00000374342 HSP90AA1P07900 732 aaKnown RBP20.42■□□□□ 0.86
PTPN20-203ENST00000374342 HSPA4P34932 840 aa20.42■□□□□ 0.86
PTPN20-203ENST00000374342 CLEC4GQ6UXB4 293 aa20.41■□□□□ 0.86
PTPN20-203ENST00000374342 DDX46Q7L014 1031 aaKnown RBP20.41■□□□□ 0.86
PTPN20-203ENST00000374342 RIPOR2Q9Y4F9 1068 aa20.41■□□□□ 0.86
PTPN20-203ENST00000374342 CCDC171Q6TFL3 1326 aa20.4■□□□□ 0.86
PTPN20-203ENST00000374342 RPS6KA4O75676 772 aa20.4■□□□□ 0.86
PTPN20-203ENST00000374342 ADORA1P30542 326 aa20.4■□□□□ 0.86
PTPN20-203ENST00000374342 NFKBIBQ15653 356 aa20.4■□□□□ 0.86
PTPN20-203ENST00000374342 GORABQ5T7V8 394 aa20.4■□□□□ 0.86
PTPN20-203ENST00000374342 MYH7P12883 1935 aa20.4■□□□□ 0.86
PTPN20-203ENST00000374342 MED23Q9ULK4 1368 aa20.4■□□□□ 0.86
PTPN20-203ENST00000374342 A0A1B0GUL6 1792 aa20.4■□□□□ 0.86
PTPN20-203ENST00000374342 PTH1RQ03431 593 aa20.39■□□□□ 0.86
PTPN20-203ENST00000374342 ATP2B3Q16720 1220 aa20.39■□□□□ 0.86
PTPN20-203ENST00000374342 FOXD4L1Q9NU39 408 aa20.39■□□□□ 0.86
PTPN20-203ENST00000374342 GOLIM4O00461 696 aa20.39■□□□□ 0.85
PTPN20-203ENST00000374342 IFIT1P09914 478 aaKnown RBP20.39■□□□□ 0.85
PTPN20-203ENST00000374342 HSP90B1P14625 803 aaKnown RBP20.39■□□□□ 0.85
PTPN20-203ENST00000374342 NEK4P51957 841 aa20.39■□□□□ 0.85
PTPN20-203ENST00000374342 XAGE2Q96GT9 111 aa20.39■□□□□ 0.85
PTPN20-203ENST00000374342 PAG1Q9NWQ8 432 aa20.39■□□□□ 0.85
PTPN20-203ENST00000374342 SRP68Q9UHB9 627 aaKnown RBP20.39■□□□□ 0.85
PTPN20-203ENST00000374342 TTC39AQ5SRH9 613 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms