RNA–Protein interactions for RNA: ENST00000373703.4

PEF1-201, Transcript of penta-EF-hand domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEF1, Length 1,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-201ENST00000373703 TTLL11Q8NHH1 800 aa18.55■□□□□ 0.56
PEF1-201ENST00000373703 RPGRQ92834 1020 aaKnown RBP18.55■□□□□ 0.56
PEF1-201ENST00000373703 ZNF622Q969S3 477 aaKnown RBP eCLIP18.55■□□□□ 0.56
PEF1-201ENST00000373703 C1orf115Q9H7X2 142 aa18.55■□□□□ 0.56
PEF1-201ENST00000373703 KCNA3P22001 575 aa18.54■□□□□ 0.56
PEF1-201ENST00000373703 LMBR1LQ6UX01 489 aa18.54■□□□□ 0.56
PEF1-201ENST00000373703 MASTLQ96GX5 879 aa18.54■□□□□ 0.56
PEF1-201ENST00000373703 WWC3Q9ULE0 1092 aa18.54■□□□□ 0.56
PEF1-201ENST00000373703 PDZRN3Q9UPQ7 1066 aa18.54■□□□□ 0.56
PEF1-201ENST00000373703 CHMP3Q9Y3E7 222 aa18.54■□□□□ 0.56
PEF1-201ENST00000373703 LAMB2P55268 1798 aa18.54■□□□□ 0.56
PEF1-201ENST00000373703 GNAI2P04899 355 aa18.53■□□□□ 0.56
PEF1-201ENST00000373703 CSF1RP07333 972 aa18.53■□□□□ 0.56
PEF1-201ENST00000373703 CCDC152Q4G0S7 254 aa18.53■□□□□ 0.56
PEF1-201ENST00000373703 HDAC5Q9UQL6 1122 aa18.53■□□□□ 0.56
PEF1-201ENST00000373703 NPR1P16066 1061 aa18.52■□□□□ 0.56
PEF1-201ENST00000373703 ANKRD44Q8N8A2 993 aa18.52■□□□□ 0.56
PEF1-201ENST00000373703 RBM17Q96I25 401 aaKnown RBP18.52■□□□□ 0.56
PEF1-201ENST00000373703 GREM2Q9H772 168 aa18.52■□□□□ 0.56
PEF1-201ENST00000373703 COL11A2P13942 1736 aaPredicted RBP18.52■□□□□ 0.56
PEF1-201ENST00000373703 FAM161AQ3B820 660 aa18.52■□□□□ 0.55
PEF1-201ENST00000373703 DDX46Q7L014 1031 aaKnown RBP18.52■□□□□ 0.55
PEF1-201ENST00000373703 CHMP4BQ9H444 224 aaKnown RBP18.52■□□□□ 0.55
PEF1-201ENST00000373703 SEC31BQ9NQW1 1179 aa18.52■□□□□ 0.55
PEF1-201ENST00000373703 ZBTB40Q9NUA8 1239 aa18.52■□□□□ 0.55
PEF1-201ENST00000373703 KIAA1551Q9HCM1 1747 aa18.51■□□□□ 0.55
PEF1-201ENST00000373703 HOXA10P31260 410 aaPredicted RBP18.51■□□□□ 0.55
PEF1-201ENST00000373703 RABL6Q3YEC7 729 aaPredicted RBP18.51■□□□□ 0.55
PEF1-201ENST00000373703 STYK1Q6J9G0 422 aa18.51■□□□□ 0.55
PEF1-201ENST00000373703 PIM2Q9P1W9 311 aa18.5■□□□□ 0.55
PEF1-201ENST00000373703 ITGA6P23229 1130 aa18.49■□□□□ 0.55
PEF1-201ENST00000373703 ALDH1B1P30837 517 aa18.49■□□□□ 0.55
PEF1-201ENST00000373703 EXOC6Q8TAG9 804 aa18.49■□□□□ 0.55
PEF1-201ENST00000373703 CELF1Q92879 486 aaKnown RBP18.49■□□□□ 0.55
PEF1-201ENST00000373703 CRAMP1Q96RY5 1269 aa18.49■□□□□ 0.55
PEF1-201ENST00000373703 TTLL6Q8N841 843 aa18.49■□□□□ 0.55
PEF1-201ENST00000373703 CNKSR1Q969H4 720 aa18.49■□□□□ 0.55
PEF1-201ENST00000373703 MYH3P11055 1940 aa18.49■□□□□ 0.55
PEF1-201ENST00000373703 IFIT5Q13325 482 aaKnown RBP18.48■□□□□ 0.55
PEF1-201ENST00000373703 CCDC57Q2TAC2 916 aa18.48■□□□□ 0.55
PEF1-201ENST00000373703 RTL9Q8NET4 1388 aa18.47■□□□□ 0.55
PEF1-201ENST00000373703 ANKRD18BA2A2Z9 1011 aa18.47■□□□□ 0.55
PEF1-201ENST00000373703 GRAPQ13588 217 aa18.47■□□□□ 0.55
PEF1-201ENST00000373703 PRPF40BQ6NWY9 871 aaKnown RBP18.47■□□□□ 0.55
PEF1-201ENST00000373703 GRAPLQ8TC17 118 aaPredicted RBP18.47■□□□□ 0.55
PEF1-201ENST00000373703 DALRD3Q5D0E6 543 aaKnown RBP18.46■□□□□ 0.55
PEF1-201ENST00000373703 ZNF594Q96JF6 807 aaPredicted RBP18.46■□□□□ 0.55
PEF1-201ENST00000373703 CDC5LQ99459 802 aaKnown RBP18.46■□□□□ 0.55
PEF1-201ENST00000373703 ZNF219Q9P2Y4 722 aaPredicted RBP18.46■□□□□ 0.55
PEF1-201ENST00000373703 BCS1LQ9Y276 419 aa18.46■□□□□ 0.55
PEF1-201ENST00000373703 COL4A1P02462 1669 aa18.46■□□□□ 0.55
PEF1-201ENST00000373703 DLEC1Q9Y238 1755 aa18.46■□□□□ 0.55
PEF1-201ENST00000373703 SRGAP3O43295 1099 aa18.45■□□□□ 0.54
PEF1-201ENST00000373703 RPS8P62241 208 aaKnown RBP18.45■□□□□ 0.54
PEF1-201ENST00000373703 TAF1P21675 1872 aa18.45■□□□□ 0.54
PEF1-201ENST00000373703 PNMA6EA0A0J9YXQ4 647 aa18.45■□□□□ 0.54
PEF1-201ENST00000373703 PPEF1O14829 653 aaPredicted RBP18.45■□□□□ 0.54
PEF1-201ENST00000373703 BBOX1O75936 387 aa18.45■□□□□ 0.54
PEF1-201ENST00000373703 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
PEF1-201ENST00000373703 MTX1Q13505 466 aa18.45■□□□□ 0.54
PEF1-201ENST00000373703 TAF7LQ5H9L4 462 aa18.45■□□□□ 0.54
PEF1-201ENST00000373703 CEP85Q6P2H3 762 aa18.45■□□□□ 0.54
PEF1-201ENST00000373703 SLC51AQ86UW1 340 aa18.45■□□□□ 0.54
PEF1-201ENST00000373703 ANKRD18AQ8IVF6 992 aa18.45■□□□□ 0.54
PEF1-201ENST00000373703 PELP1Q8IZL8 1130 aaKnown RBP18.45■□□□□ 0.54
PEF1-201ENST00000373703 KLHDC4Q8TBB5 520 aa18.45■□□□□ 0.54
PEF1-201ENST00000373703 GOLGB1Q14789 3259 aaKnown RBP18.44■□□□□ 0.54
PEF1-201ENST00000373703 IGHMBP2P38935 993 aaKnown RBP18.44■□□□□ 0.54
PEF1-201ENST00000373703 RFX5P48382 616 aaPredicted RBP18.44■□□□□ 0.54
PEF1-201ENST00000373703 MPHOSPH8Q99549 860 aa18.43■□□□□ 0.54
PEF1-201ENST00000373703 SLX4Q8IY92 1834 aa18.42■□□□□ 0.54
PEF1-201ENST00000373703 BRCA1P38398 1863 aaKnown RBP18.42■□□□□ 0.54
PEF1-201ENST00000373703 C21orf2O43822 256 aa18.42■□□□□ 0.54
PEF1-201ENST00000373703 OLFM4Q6UX06 510 aa18.42■□□□□ 0.54
PEF1-201ENST00000373703 RPAP2Q8IXW5 612 aaPredicted RBP18.42■□□□□ 0.54
PEF1-201ENST00000373703 CACNA1SQ13698 1873 aa18.42■□□□□ 0.54
PEF1-201ENST00000373703 PTPN12Q05209 780 aaKnown RBP18.41■□□□□ 0.54
PEF1-201ENST00000373703 PA2G4Q9UQ80 394 aaKnown RBP18.41■□□□□ 0.54
PEF1-201ENST00000373703 PCDHB15Q9Y5E8 787 aa18.41■□□□□ 0.54
PEF1-201ENST00000373703 LDHAL6AQ6ZMR3 332 aa18.41■□□□□ 0.54
PEF1-201ENST00000373703 SIRT2Q8IXJ6 389 aa18.41■□□□□ 0.54
PEF1-201ENST00000373703 C7orf43Q8WVR3 580 aa18.41■□□□□ 0.54
PEF1-201ENST00000373703 PUS3Q9BZE2 481 aaKnown RBP18.41■□□□□ 0.54
PEF1-201ENST00000373703 BSDC1Q9NW68 430 aaPredicted RBP18.41■□□□□ 0.54
PEF1-201ENST00000373703 ATP6V0A2Q9Y487 856 aa18.41■□□□□ 0.54
PEF1-201ENST00000373703 YBX3P16989 372 aaKnown RBP eCLIP18.4■□□□□ 0.542e-6■□□□□ 8.9
PEF1-201ENST00000373703 POLA2Q14181 598 aa18.4■□□□□ 0.54
PEF1-201ENST00000373703 SP8Q8IXZ3 490 aa18.4■□□□□ 0.54
PEF1-201ENST00000373703 SSH3Q8TE77 659 aa18.4■□□□□ 0.54
PEF1-201ENST00000373703 SIL1Q9H173 461 aa18.4■□□□□ 0.54
PEF1-201ENST00000373703 CNNM1Q9NRU3 951 aa18.4■□□□□ 0.54
PEF1-201ENST00000373703 NEFLP07196 543 aa18.39■□□□□ 0.53
PEF1-201ENST00000373703 GPR162Q16538 588 aa18.39■□□□□ 0.53
PEF1-201ENST00000373703 LRRC24Q50LG9 513 aa18.39■□□□□ 0.53
PEF1-201ENST00000373703 TMC4Q7Z404 712 aa18.39■□□□□ 0.53
PEF1-201ENST00000373703 AAMPQ13685 434 aa18.38■□□□□ 0.53
PEF1-201ENST00000373703 TMX4Q9H1E5 349 aaPredicted RBP18.38■□□□□ 0.53
PEF1-201ENST00000373703 COPRSQ9NQ92 184 aa18.38■□□□□ 0.53
PEF1-201ENST00000373703 MINPP1Q9UNW1 487 aa18.38■□□□□ 0.53
PEF1-201ENST00000373703 SPEF2Q9C093 1822 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms