RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 ARHGEF10O15013 1369 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 CHL1O00533 1208 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 KIF20AO95235 890 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 IGHMBP2P38935 993 aaKnown RBP12.36□□□□□ -0.43
PGK1-201ENST00000373316 TOM1L2Q6ZVM7 507 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 BRPF3Q9ULD4 1205 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 ERBB3P21860 1342 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 C8orf34Q49A92 452 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 CWC27Q6UX04 472 aaKnown RBP12.36□□□□□ -0.43
PGK1-201ENST00000373316 LEKR1Q6ZMV7 388 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 UBAC1Q9BSL1 405 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 SPATA31A3Q5VYP0 1347 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 NFAT5O94916 1531 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 MED1Q15648 1581 aaPredicted RBP12.36□□□□□ -0.43
PGK1-201ENST00000373316 OFD1O75665 1012 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 BAG4O95429 457 aaKnown RBP12.36□□□□□ -0.43
PGK1-201ENST00000373316 STX1AQ16623 288 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 SOGA3Q5TF21 947 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 CCDC150Q8NCX0 1101 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 CAGE1Q8TC20 777 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 MPHOSPH8Q99549 860 aa12.36□□□□□ -0.43
PGK1-201ENST00000373316 BMP2KQ9NSY1 1161 aaPredicted RBP12.36□□□□□ -0.43
PGK1-201ENST00000373316 LRSAM1Q6UWE0 723 aa12.35□□□□□ -0.43
PGK1-201ENST00000373316 PDILTQ8N807 584 aa12.35□□□□□ -0.43
PGK1-201ENST00000373316 PAXBP1Q9Y5B6 917 aa12.35□□□□□ -0.43
PGK1-201ENST00000373316 RBM25P49756 843 aaKnown RBP12.35□□□□□ -0.43
PGK1-201ENST00000373316 NWD1Q149M9 1564 aa12.35□□□□□ -0.43
PGK1-201ENST00000373316 DYNC1I1O14576 645 aa12.35□□□□□ -0.43
PGK1-201ENST00000373316 IFIT1P09914 478 aaKnown RBP12.35□□□□□ -0.43
PGK1-201ENST00000373316 UQCRFS1P1P0C7P4 283 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 FILIP1Q7Z7B0 1213 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 CCDC171Q6TFL3 1326 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 KDM2BQ8NHM5 1336 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 UQCRHLA0A096LP55 91 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 UQCRHP07919 91 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 SLF2Q8IX21 1173 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 IFNL2Q8IZJ0 200 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 LRRC27Q9C0I9 530 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 STX6O43752 255 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 MAP9Q49MG5 647 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 CRB1P82279 1406 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 KDRP35968 1356 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 CLCN1P35523 988 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 AKAP4Q5JQC9 854 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
PGK1-201ENST00000373316 XIRP1Q702N8 1843 aaKnown RBP12.34□□□□□ -0.43
PGK1-201ENST00000373316 TMTC2Q8N394 836 aa12.33□□□□□ -0.43
PGK1-201ENST00000373316 ZBTB40Q9NUA8 1239 aa12.33□□□□□ -0.43
PGK1-201ENST00000373316 A0A087WZG4 1122 aa12.33□□□□□ -0.44
PGK1-201ENST00000373316 MAP3K12Q12852 859 aa12.33□□□□□ -0.44
PGK1-201ENST00000373316 ZNF397Q8NF99 534 aaPredicted RBP12.33□□□□□ -0.44
PGK1-201ENST00000373316 KIF18AQ8NI77 898 aa12.33□□□□□ -0.44
PGK1-201ENST00000373316 RAB3GAP1Q15042 981 aa12.33□□□□□ -0.44
PGK1-201ENST00000373316 CCDC148Q8NFR7 591 aa12.33□□□□□ -0.44
PGK1-201ENST00000373316 PDCL3Q9H2J4 239 aa12.33□□□□□ -0.44
PGK1-201ENST00000373316 SLC5A1P13866 664 aa12.33□□□□□ -0.44
PGK1-201ENST00000373316 MAP3K5Q99683 1374 aa12.32□□□□□ -0.44
PGK1-201ENST00000373316 SFPQP23246 707 aaKnown RBP eCLIP12.32□□□□□ -0.44
PGK1-201ENST00000373316 USP8P40818 1118 aa12.32□□□□□ -0.44
PGK1-201ENST00000373316 AIDAQ96BJ3 306 aa12.32□□□□□ -0.44
PGK1-201ENST00000373316 EXOC6BQ9Y2D4 811 aa12.32□□□□□ -0.44
PGK1-201ENST00000373316 PROSER3Q2NL68 480 aa12.32□□□□□ -0.44
PGK1-201ENST00000373316 FAM107BQ9H098 131 aa12.32□□□□□ -0.44
PGK1-201ENST00000373316 RBM27Q9P2N5 1060 aaKnown RBP12.32□□□□□ -0.44
PGK1-201ENST00000373316 LRRFIP2Q9Y608 721 aaKnown RBP12.32□□□□□ -0.44
PGK1-201ENST00000373316 CCDC12Q8WUD4 166 aaPredicted RBP12.32□□□□□ -0.44
PGK1-201ENST00000373316 JARID2Q92833 1246 aaPredicted RBP12.32□□□□□ -0.44
PGK1-201ENST00000373316 ESYT1Q9BSJ8 1104 aa12.32□□□□□ -0.44
PGK1-201ENST00000373316 RAB34Q9BZG1 259 aa12.32□□□□□ -0.44
PGK1-201ENST00000373316 BTG4Q9NY30 223 aa12.32□□□□□ -0.44
PGK1-201ENST00000373316 USP19O94966 1318 aa12.32□□□□□ -0.44
PGK1-201ENST00000373316 ZSCAN22P10073 491 aaPredicted RBP12.32□□□□□ -0.44
PGK1-201ENST00000373316 TERF1P54274 439 aa12.31□□□□□ -0.44
PGK1-201ENST00000373316 PRPF40BQ6NWY9 871 aaKnown RBP12.31□□□□□ -0.44
PGK1-201ENST00000373316 SNRPA1P09661 255 aaKnown RBP12.31□□□□□ -0.44
PGK1-201ENST00000373316 C8orf76Q96K31 380 aa12.31□□□□□ -0.44
PGK1-201ENST00000373316 SYCE3A1L190 88 aa12.31□□□□□ -0.44
PGK1-201ENST00000373316 MEIS3Q99687 375 aa12.31□□□□□ -0.44
PGK1-201ENST00000373316 GOLGA6L10A6NI86 522 aa12.31□□□□□ -0.44
PGK1-201ENST00000373316 MYL6BP14649 208 aa12.31□□□□□ -0.44
PGK1-201ENST00000373316 PDE1AP54750 535 aa12.31□□□□□ -0.44
PGK1-201ENST00000373316 PTPN14Q15678 1187 aa12.31□□□□□ -0.44
PGK1-201ENST00000373316 CHPF2Q9P2E5 772 aa12.31□□□□□ -0.44
PGK1-201ENST00000373316 RGPD1P0DJD0 1748 aa12.3□□□□□ -0.44
PGK1-201ENST00000373316 TNS3Q68CZ2 1445 aa12.3□□□□□ -0.44
PGK1-201ENST00000373316 TDO2P48775 406 aa12.3□□□□□ -0.44
PGK1-201ENST00000373316 BRPF1P55201 1214 aaPredicted RBP12.3□□□□□ -0.44
PGK1-201ENST00000373316 CNNM2Q9H8M5 875 aa12.3□□□□□ -0.44
PGK1-201ENST00000373316 FAM114A1Q8IWE2 563 aa12.3□□□□□ -0.44
PGK1-201ENST00000373316 RHPN1Q8TCX5 695 aa12.3□□□□□ -0.44
PGK1-201ENST00000373316 SRRTQ9BXP5 876 aaKnown RBP12.3□□□□□ -0.44
PGK1-201ENST00000373316 CYP27B1O15528 508 aa12.3□□□□□ -0.44
PGK1-201ENST00000373316 NAP1L1P55209 391 aaKnown RBP12.3□□□□□ -0.44
PGK1-201ENST00000373316 EHBP1Q8NDI1 1231 aa12.3□□□□□ -0.44
PGK1-201ENST00000373316 IL1RAPL2Q9NP60 686 aa12.3□□□□□ -0.44
PGK1-201ENST00000373316 ANKRD18BA2A2Z9 1011 aa12.29□□□□□ -0.44
PGK1-201ENST00000373316 TUBBP07437 444 aa12.29□□□□□ -0.44
PGK1-201ENST00000373316 TRAF1Q13077 416 aa12.29□□□□□ -0.44
PGK1-201ENST00000373316 IFIT5Q13325 482 aaKnown RBP12.29□□□□□ -0.44
PGK1-201ENST00000373316 JAKMIP3Q5VZ66 844 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms