RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 AFF2P51816 1311 aa16.13■□□□□ 0.17
CSTF2-201ENST00000372972 NECTIN1Q15223 517 aa16.13■□□□□ 0.17
CSTF2-201ENST00000372972 MAP4K1Q92918 833 aa16.13■□□□□ 0.17
CSTF2-201ENST00000372972 TTC14Q96N46 770 aa16.13■□□□□ 0.17
CSTF2-201ENST00000372972 DBNDD2Q9BQY9 259 aa16.13■□□□□ 0.17
CSTF2-201ENST00000372972 ZBTB1Q9Y2K1 713 aa16.13■□□□□ 0.17
CSTF2-201ENST00000372972 PRPF40BQ6NWY9 871 aaKnown RBP16.12■□□□□ 0.17
CSTF2-201ENST00000372972 TM6SF1Q9BZW5 370 aa16.12■□□□□ 0.17
CSTF2-201ENST00000372972 ZDHHC9Q9Y397 364 aa16.12■□□□□ 0.17
CSTF2-201ENST00000372972 MAP3K15Q6ZN16 1313 aa16.11■□□□□ 0.17
CSTF2-201ENST00000372972 EYA2O00167 538 aa16.11■□□□□ 0.17
CSTF2-201ENST00000372972 ZKSCAN1P17029 563 aaPredicted RBP16.11■□□□□ 0.17
CSTF2-201ENST00000372972 L1TD1Q5T7N2 865 aaKnown RBP16.11■□□□□ 0.17
CSTF2-201ENST00000372972 ARXQ96QS3 562 aa16.11■□□□□ 0.17
CSTF2-201ENST00000372972 HAUS7Q99871 368 aa16.11■□□□□ 0.17
CSTF2-201ENST00000372972 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
CSTF2-201ENST00000372972 LOC102724428A0A0B4J2F2 783 aa16.11■□□□□ 0.17
CSTF2-201ENST00000372972 A0A0D9SFI3 127 aa16.11■□□□□ 0.17
CSTF2-201ENST00000372972 CIAO1O76071 339 aa16.11■□□□□ 0.17
CSTF2-201ENST00000372972 PCCAP05165 728 aaPredicted RBP16.11■□□□□ 0.17
CSTF2-201ENST00000372972 ATP6V1AP38606 617 aa16.11■□□□□ 0.17
CSTF2-201ENST00000372972 SIK1P57059 783 aa16.11■□□□□ 0.17
CSTF2-201ENST00000372972 GIGYF2Q6Y7W6 1299 aaKnown RBP16.11■□□□□ 0.17
CSTF2-201ENST00000372972 RBM8AQ9Y5S9 174 aaKnown RBP16.11■□□□□ 0.17
CSTF2-201ENST00000372972 PALLDQ8WX93 1383 aa16.1■□□□□ 0.17
CSTF2-201ENST00000372972 CASTP20810 708 aaKnown RBP16.1■□□□□ 0.17
CSTF2-201ENST00000372972 KCNJ4P48050 445 aa16.1■□□□□ 0.17
CSTF2-201ENST00000372972 AK2P54819 239 aa16.1■□□□□ 0.17
CSTF2-201ENST00000372972 EDC3Q96F86 508 aaKnown RBP16.1■□□□□ 0.17
CSTF2-201ENST00000372972 GJD4Q96KN9 370 aaPredicted RBP16.1■□□□□ 0.17
CSTF2-201ENST00000372972 LIMCH1Q9UPQ0 1083 aa16.1■□□□□ 0.17
CSTF2-201ENST00000372972 CCDC57Q2TAC2 916 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 CREB3L3Q68CJ9 461 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 MCTP1Q6DN14 999 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 ZBTB38Q8NAP3 1195 aaPredicted RBP16.09■□□□□ 0.17
CSTF2-201ENST00000372972 SMARCC1Q92922 1105 aaPredicted RBP16.09■□□□□ 0.17
CSTF2-201ENST00000372972 ZNF594Q96JF6 807 aaPredicted RBP16.09■□□□□ 0.17
CSTF2-201ENST00000372972 NEUROD6Q96NK8 337 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 PLA2G12BQ9BX93 195 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 ZSWIM6Q9HCJ5 1215 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 RFX7Q2KHR2 1363 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 GOLGA6L3A6NEY3 463 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 ITPK1Q13572 414 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 LRRC24Q50LG9 513 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 HSP90AB3PQ58FF7 597 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 VPS53Q5VIR6 699 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 JAKMIP1Q96N16 626 aaKnown RBP16.09■□□□□ 0.17
CSTF2-201ENST00000372972 FBXO3Q9UK99 471 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 CYP46A1Q9Y6A2 500 aa16.09■□□□□ 0.17
CSTF2-201ENST00000372972 MED23Q9ULK4 1368 aa16.08■□□□□ 0.17
CSTF2-201ENST00000372972 FSD2A1L4K1 749 aa16.08■□□□□ 0.16
CSTF2-201ENST00000372972 IL6STP40189 918 aaPredicted RBP16.08■□□□□ 0.16
CSTF2-201ENST00000372972 TIMM10P62072 90 aa16.08■□□□□ 0.16
CSTF2-201ENST00000372972 HLFQ16534 295 aa16.08■□□□□ 0.16
CSTF2-201ENST00000372972 ADCK5Q3MIX3 580 aa16.08■□□□□ 0.16
CSTF2-201ENST00000372972 RNF20Q5VTR2 975 aa16.08■□□□□ 0.16
CSTF2-201ENST00000372972 INTS5Q6P9B9 1019 aaKnown RBP16.08■□□□□ 0.16
CSTF2-201ENST00000372972 FAM89AQ96GI7 184 aa16.08■□□□□ 0.16
CSTF2-201ENST00000372972 DNAJC2Q99543 621 aaKnown RBP16.08■□□□□ 0.16
CSTF2-201ENST00000372972 BRD1O95696 1058 aa16.07■□□□□ 0.16
CSTF2-201ENST00000372972 RUFY3Q7L099 469 aa16.07■□□□□ 0.16
CSTF2-201ENST00000372972 PDRG1Q9NUG6 133 aa16.07■□□□□ 0.16
CSTF2-201ENST00000372972 CCDC87Q9NVE4 849 aa16.07■□□□□ 0.16
CSTF2-201ENST00000372972 ATRNO75882 1429 aa16.07■□□□□ 0.16
CSTF2-201ENST00000372972 SLC27A2O14975 620 aa16.07■□□□□ 0.16
CSTF2-201ENST00000372972 CSF1RP07333 972 aa16.07■□□□□ 0.16
CSTF2-201ENST00000372972 PSMA5P28066 241 aa16.07■□□□□ 0.16
CSTF2-201ENST00000372972 CRKLP46109 303 aaKnown RBP16.07■□□□□ 0.16
CSTF2-201ENST00000372972 PTF1AQ7RTS3 328 aa16.07■□□□□ 0.16
CSTF2-201ENST00000372972 TICAM2Q86XR7 235 aa16.07■□□□□ 0.16
CSTF2-201ENST00000372972 CEP126Q9P2H0 1117 aa16.07■□□□□ 0.16
CSTF2-201ENST00000372972 CICQ96RK0 1608 aaPredicted RBP16.06■□□□□ 0.16
CSTF2-201ENST00000372972 TAF5LO75529 589 aa16.06■□□□□ 0.16
CSTF2-201ENST00000372972 CPA1P15085 419 aa16.06■□□□□ 0.16
CSTF2-201ENST00000372972 KLHL40Q2TBA0 621 aa16.06■□□□□ 0.16
CSTF2-201ENST00000372972 FAM182BQ5T319 152 aa16.06■□□□□ 0.16
CSTF2-201ENST00000372972 ZNF589Q86UQ0 364 aaPredicted RBP16.06■□□□□ 0.16
CSTF2-201ENST00000372972 NLRP10Q86W26 655 aa16.06■□□□□ 0.16
CSTF2-201ENST00000372972 KBTBD3Q8NAB2 608 aa16.06■□□□□ 0.16
CSTF2-201ENST00000372972 PUS3Q9BZE2 481 aaKnown RBP16.06■□□□□ 0.16
CSTF2-201ENST00000372972 TRPC5Q9UL62 973 aaPredicted RBP16.06■□□□□ 0.16
CSTF2-201ENST00000372972 NDUFB9Q9Y6M9 179 aa16.06■□□□□ 0.16
CSTF2-201ENST00000372972 DDX49Q9Y6V7 483 aaKnown RBP16.06■□□□□ 0.16
CSTF2-201ENST00000372972 CDHR2Q9BYE9 1310 aa16.06■□□□□ 0.16
CSTF2-201ENST00000372972 EIF5P55010 431 aaKnown RBP16.06■□□□□ 0.16
CSTF2-201ENST00000372972 DZIP3Q86Y13 1208 aaKnown RBP16.06■□□□□ 0.16
CSTF2-201ENST00000372972 LMBRD1Q9NUN5 540 aa16.06■□□□□ 0.16
CSTF2-201ENST00000372972 ISY1Q9ULR0 285 aaKnown RBP16.06■□□□□ 0.16
CSTF2-201ENST00000372972 TBC1D2BQ9UPU7 963 aa16.06■□□□□ 0.16
CSTF2-201ENST00000372972 A0A1B0GUL7 405 aa16.05■□□□□ 0.16
CSTF2-201ENST00000372972 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
CSTF2-201ENST00000372972 IFIT5Q13325 482 aaKnown RBP16.05■□□□□ 0.16
CSTF2-201ENST00000372972 DDX46Q7L014 1031 aaKnown RBP16.05■□□□□ 0.16
CSTF2-201ENST00000372972 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
CSTF2-201ENST00000372972 HMG20BQ9P0W2 317 aa16.05■□□□□ 0.16
CSTF2-201ENST00000372972 AKAP2Q9Y2D5 859 aa16.05■□□□□ 0.16
CSTF2-201ENST00000372972 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.05■□□□□ 0.16
CSTF2-201ENST00000372972 RREB1Q92766 1687 aa16.04■□□□□ 0.16
CSTF2-201ENST00000372972 ONECUT3O60422 494 aaPredicted RBP16.04■□□□□ 0.16
CSTF2-201ENST00000372972 TSGA10IPQ3SY00 556 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms