RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 RABEP2Q9H5N1 569 aa12.34□□□□□ -0.43
TRERF1-203ENST00000372917 ANAPC4Q9UJX5 808 aa12.34□□□□□ -0.43
TRERF1-203ENST00000372917 GOLGA6L19H0YKK7 550 aa12.34□□□□□ -0.43
TRERF1-203ENST00000372917 NEMFO60524 1076 aa12.34□□□□□ -0.43
TRERF1-203ENST00000372917 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRERF1-203ENST00000372917 FAM177A1Q8N128 213 aaPredicted RBP12.34□□□□□ -0.43
TRERF1-203ENST00000372917 USP16Q9Y5T5 823 aa12.34□□□□□ -0.43
TRERF1-203ENST00000372917 N4BP1O75113 896 aaKnown RBP12.33□□□□□ -0.43
TRERF1-203ENST00000372917 MAP3K11Q16584 847 aa12.33□□□□□ -0.43
TRERF1-203ENST00000372917 LONRF2Q1L5Z9 754 aa12.33□□□□□ -0.43
TRERF1-203ENST00000372917 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.33□□□□□ -0.43
TRERF1-203ENST00000372917 CADPS2Q86UW7 1296 aa12.33□□□□□ -0.43
TRERF1-203ENST00000372917 FUT8Q9BYC5 575 aa12.33□□□□□ -0.43
TRERF1-203ENST00000372917 MRFAP1Q9Y605 127 aa12.33□□□□□ -0.43
TRERF1-203ENST00000372917 EXOC5O00471 708 aa12.33□□□□□ -0.44
TRERF1-203ENST00000372917 TPD52L2O43399 206 aaKnown RBP12.33□□□□□ -0.44
TRERF1-203ENST00000372917 RPS6KA5O75582 802 aa12.33□□□□□ -0.44
TRERF1-203ENST00000372917 EIF3JO75822 258 aaKnown RBP12.33□□□□□ -0.44
TRERF1-203ENST00000372917 CRACR2AQ9BSW2 395 aa12.33□□□□□ -0.44
TRERF1-203ENST00000372917 SRCIN1Q9C0H9 1055 aa12.33□□□□□ -0.44
TRERF1-203ENST00000372917 ERC2O15083 957 aa12.33□□□□□ -0.44
TRERF1-203ENST00000372917 PYGLP06737 847 aa12.33□□□□□ -0.44
TRERF1-203ENST00000372917 SETSIPP0DME0 302 aa12.33□□□□□ -0.44
TRERF1-203ENST00000372917 CCT5P48643 541 aa12.33□□□□□ -0.44
TRERF1-203ENST00000372917 EXOSC9Q06265 439 aaKnown RBP12.33□□□□□ -0.44
TRERF1-203ENST00000372917 ACTN3Q08043 901 aaPredicted RBP12.33□□□□□ -0.44
TRERF1-203ENST00000372917 GRIK3Q13003 919 aa12.33□□□□□ -0.44
TRERF1-203ENST00000372917 GGNBP2Q9H3C7 697 aa12.33□□□□□ -0.44
TRERF1-203ENST00000372917 PLXNC1O60486 1568 aa12.33□□□□□ -0.44
TRERF1-203ENST00000372917 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
TRERF1-203ENST00000372917 EBAG9O00559 213 aa12.32□□□□□ -0.44
TRERF1-203ENST00000372917 CHUKO15111 745 aa12.32□□□□□ -0.44
TRERF1-203ENST00000372917 CYB5RLQ6IPT4 315 aa12.32□□□□□ -0.44
TRERF1-203ENST00000372917 ZKSCAN4Q969J2 545 aaPredicted RBP12.32□□□□□ -0.44
TRERF1-203ENST00000372917 RMI1Q9H9A7 625 aa12.32□□□□□ -0.44
TRERF1-203ENST00000372917 FAM169AQ9Y6X4 670 aa12.32□□□□□ -0.44
TRERF1-203ENST00000372917 ATF7IPQ6VMQ6 1270 aa12.32□□□□□ -0.44
TRERF1-203ENST00000372917 ACRBPQ8NEB7 543 aa12.32□□□□□ -0.44
TRERF1-203ENST00000372917 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.32□□□□□ -0.44
TRERF1-203ENST00000372917 APOBRQ0VD83 1088 aa12.32□□□□□ -0.44
TRERF1-203ENST00000372917 RINLQ6ZS11 566 aa12.32□□□□□ -0.44
TRERF1-203ENST00000372917 PLA2G4DQ86XP0 818 aa12.32□□□□□ -0.44
TRERF1-203ENST00000372917 CHCHD3Q9NX63 227 aaKnown RBP12.32□□□□□ -0.44
TRERF1-203ENST00000372917 ZNF232Q9UNY5 417 aa12.32□□□□□ -0.44
TRERF1-203ENST00000372917 GBP2P32456 591 aaPredicted RBP12.31□□□□□ -0.44
TRERF1-203ENST00000372917 INTS3Q68E01 1043 aaKnown RBP12.31□□□□□ -0.44
TRERF1-203ENST00000372917 TMTC2Q8N394 836 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 SPDL1Q96EA4 605 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 TEX13AQ9BXU3 409 aaPredicted RBP12.31□□□□□ -0.44
TRERF1-203ENST00000372917 MYO1FO00160 1098 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 NUP62CLQ9H1M0 184 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 SYCP2Q9BX26 1530 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 EFCAB8A8MWE9 144 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 RPSAP08865 295 aaKnown RBP12.31□□□□□ -0.44
TRERF1-203ENST00000372917 PARD6BQ9BYG5 372 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 ZSWIM4Q9H7M6 989 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 TADA3O75528 432 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 RANBP1P43487 201 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 ZNF165P49910 485 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 POTEDQ86YR6 584 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 C1orf115Q9H7X2 142 aa12.31□□□□□ -0.44
TRERF1-203ENST00000372917 DUOX2Q9NRD8 1548 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 TRIM27P14373 513 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 PDCD2Q16342 344 aaPredicted RBP12.3□□□□□ -0.44
TRERF1-203ENST00000372917 TMEM57Q8N5G2 664 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 CARD14Q9BXL6 1004 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 TMEM165Q9HC07 324 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 ATP10AO60312 1499 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 PPFIA2O75334 1257 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 CCDC93Q567U6 631 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 C3orf20Q8ND61 904 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 SPDYE1Q8NFV5 336 aaPredicted RBP12.3□□□□□ -0.44
TRERF1-203ENST00000372917 TNMDQ9H2S6 317 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 NSD3Q9BZ95 1437 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 TBC1D25Q3MII6 688 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 HHATQ5VTY9 493 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 PPP1R13BQ96KQ4 1090 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 DNAJC25Q9H1X3 360 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 FAM204AQ9H8W3 233 aa12.3□□□□□ -0.44
TRERF1-203ENST00000372917 KDM5AP29375 1690 aaKnown RBP12.29□□□□□ -0.44
TRERF1-203ENST00000372917 UNC13BO14795 1591 aa12.29□□□□□ -0.44
TRERF1-203ENST00000372917 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
TRERF1-203ENST00000372917 GPR161Q8N6U8 529 aaKnown RBP12.29□□□□□ -0.44
TRERF1-203ENST00000372917 SAAL1Q96ER3 474 aa12.29□□□□□ -0.44
TRERF1-203ENST00000372917 USP4Q13107 963 aa12.29□□□□□ -0.44
TRERF1-203ENST00000372917 CC2D2BQ6DHV5 1058 aa12.29□□□□□ -0.44
TRERF1-203ENST00000372917 MYLK4Q86YV6 388 aaPredicted RBP12.29□□□□□ -0.44
TRERF1-203ENST00000372917 CLIC6Q96NY7 704 aa12.29□□□□□ -0.44
TRERF1-203ENST00000372917 CABP2Q9NPB3 220 aa12.29□□□□□ -0.44
TRERF1-203ENST00000372917 A1CFQ9NQ94 594 aaKnown RBP12.29□□□□□ -0.44
TRERF1-203ENST00000372917 MYO5CQ9NQX4 1742 aa12.29□□□□□ -0.44
TRERF1-203ENST00000372917 GOLGA6L4A6NEF3 574 aa12.29□□□□□ -0.44
TRERF1-203ENST00000372917 NRDCO43847 1150 aa12.29□□□□□ -0.44
TRERF1-203ENST00000372917 NOB1Q9ULX3 412 aaKnown RBP12.29□□□□□ -0.44
TRERF1-203ENST00000372917 SMC3Q9UQE7 1217 aa12.29□□□□□ -0.44
TRERF1-203ENST00000372917 PECAM1P16284 738 aaPredicted RBP12.28□□□□□ -0.44
TRERF1-203ENST00000372917 GNAI1P63096 354 aa12.28□□□□□ -0.44
TRERF1-203ENST00000372917 PREPLQ4J6C6 727 aaPredicted RBP12.28□□□□□ -0.44
TRERF1-203ENST00000372917 CCDC181Q5TID7 509 aa12.28□□□□□ -0.44
TRERF1-203ENST00000372917 MAST1Q9Y2H9 1570 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms