RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 CHD4Q14839 1912 aa31.88■■■□□ 2.69
C9orf50-201ENST00000372478 ATF7IPQ6VMQ6 1270 aa31.87■■■□□ 2.69
C9orf50-201ENST00000372478 OLFM4Q6UX06 510 aa31.86■■■□□ 2.69
C9orf50-201ENST00000372478 COL4A1P02462 1669 aa31.86■■■□□ 2.69
C9orf50-201ENST00000372478 CTSWP56202 376 aa31.86■■■□□ 2.69
C9orf50-201ENST00000372478 ZKSCAN2Q63HK3 967 aa31.86■■■□□ 2.69
C9orf50-201ENST00000372478 C7orf43Q8WVR3 580 aa31.86■■■□□ 2.69
C9orf50-201ENST00000372478 RCAN3Q9UKA8 241 aa31.86■■■□□ 2.69
C9orf50-201ENST00000372478 CCT4P50991 539 aaKnown RBP31.85■■■□□ 2.69
C9orf50-201ENST00000372478 SLC51AQ86UW1 340 aa31.85■■■□□ 2.69
C9orf50-201ENST00000372478 CLUAP1Q96AJ1 413 aa31.85■■■□□ 2.69
C9orf50-201ENST00000372478 CCDC152Q4G0S7 254 aa31.84■■■□□ 2.69
C9orf50-201ENST00000372478 PPEF1O14829 653 aaPredicted RBP31.83■■■□□ 2.69
C9orf50-201ENST00000372478 NBPF7P0C2Y1 421 aaPredicted RBP31.83■■■□□ 2.69
C9orf50-201ENST00000372478 PLA2G12BQ9BX93 195 aa31.83■■■□□ 2.69
C9orf50-201ENST00000372478 SEC31BQ9NQW1 1179 aa31.83■■■□□ 2.69
C9orf50-201ENST00000372478 FER1L6Q2WGJ9 1857 aa31.83■■■□□ 2.69
C9orf50-201ENST00000372478 GRAPQ13588 217 aa31.82■■■□□ 2.69
C9orf50-201ENST00000372478 TTLL11Q8NHH1 800 aa31.82■■■□□ 2.69
C9orf50-201ENST00000372478 GRAPLQ8TC17 118 aaPredicted RBP31.82■■■□□ 2.69
C9orf50-201ENST00000372478 CELF1Q92879 486 aaKnown RBP31.82■■■□□ 2.68
C9orf50-201ENST00000372478 USP44Q9H0E7 712 aa31.81■■■□□ 2.68
C9orf50-201ENST00000372478 UTYO14607 1347 aa31.8■■■□□ 2.68
C9orf50-201ENST00000372478 RASSF7Q02833 373 aa31.8■■■□□ 2.68
C9orf50-201ENST00000372478 FOXO4P98177 505 aa31.79■■■□□ 2.68
C9orf50-201ENST00000372478 EPHA10Q5JZY3 1008 aa31.79■■■□□ 2.68
C9orf50-201ENST00000372478 GREM2Q9H772 168 aa31.79■■■□□ 2.68
C9orf50-201ENST00000372478 NFKBIEO00221 500 aa31.78■■■□□ 2.68
C9orf50-201ENST00000372478 BBOX1O75936 387 aa31.78■■■□□ 2.68
C9orf50-201ENST00000372478 CCDC93Q567U6 631 aa31.78■■■□□ 2.68
C9orf50-201ENST00000372478 SOGA3Q5TF21 947 aa31.78■■■□□ 2.68
C9orf50-201ENST00000372478 INTS3Q68E01 1043 aaKnown RBP31.78■■■□□ 2.68
C9orf50-201ENST00000372478 SUCLG2Q96I99 432 aa31.78■■■□□ 2.68
C9orf50-201ENST00000372478 SBF1O95248 1867 aa31.78■■■□□ 2.68
C9orf50-201ENST00000372478 CCDC88AQ3V6T2 1871 aa31.77■■■□□ 2.68
C9orf50-201ENST00000372478 SPEF2Q9C093 1822 aa31.77■■■□□ 2.68
C9orf50-201ENST00000372478 FAM161AQ3B820 660 aa31.76■■■□□ 2.67
C9orf50-201ENST00000372478 KAZALD1Q96I82 304 aa31.76■■■□□ 2.67
C9orf50-201ENST00000372478 ATP6V0A2Q9Y487 856 aa31.76■■■□□ 2.67
C9orf50-201ENST00000372478 CSF1RP07333 972 aa31.75■■■□□ 2.67
C9orf50-201ENST00000372478 RPS8P62241 208 aaKnown RBP31.75■■■□□ 2.67
C9orf50-201ENST00000372478 CHMP3Q9Y3E7 222 aa31.75■■■□□ 2.67
C9orf50-201ENST00000372478 RTL9Q8NET4 1388 aa31.74■■■□□ 2.67
C9orf50-201ENST00000372478 LMBR1LQ6UX01 489 aa31.74■■■□□ 2.67
C9orf50-201ENST00000372478 FTSJ3Q8IY81 847 aaKnown RBP31.74■■■□□ 2.67
C9orf50-201ENST00000372478 TMEM57Q8N5G2 664 aa31.74■■■□□ 2.67
C9orf50-201ENST00000372478 SNED1Q8TER0 1413 aa31.73■■■□□ 2.67
C9orf50-201ENST00000372478 DZIP1LQ8IYY4 767 aaKnown RBP31.73■■■□□ 2.67
C9orf50-201ENST00000372478 LRRC37AA6NMS7 1700 aa31.72■■■□□ 2.67
C9orf50-201ENST00000372478 RLBP1P12271 317 aa31.72■■■□□ 2.67
C9orf50-201ENST00000372478 PRELPP51888 382 aa31.72■■■□□ 2.67
C9orf50-201ENST00000372478 CC2D2BQ6DHV5 1058 aa31.72■■■□□ 2.67
C9orf50-201ENST00000372478 SP8Q8IXZ3 490 aa31.72■■■□□ 2.67
C9orf50-201ENST00000372478 MEIS3Q99687 375 aa31.72■■■□□ 2.67
C9orf50-201ENST00000372478 TAOK3Q9H2K8 898 aa31.72■■■□□ 2.67
C9orf50-201ENST00000372478 PLIN1O60240 522 aa31.71■■■□□ 2.67
C9orf50-201ENST00000372478 ITGA6P23229 1130 aa31.71■■■□□ 2.67
C9orf50-201ENST00000372478 RTKN2Q8IZC4 609 aa31.71■■■□□ 2.67
C9orf50-201ENST00000372478 TMX4Q9H1E5 349 aaPredicted RBP31.71■■■□□ 2.67
C9orf50-201ENST00000372478 BICC1Q9H694 974 aaKnown RBP31.71■■■□□ 2.67
C9orf50-201ENST00000372478 TMC4Q7Z404 712 aa31.71■■■□□ 2.67
C9orf50-201ENST00000372478 ANKRD18AQ8IVF6 992 aa31.71■■■□□ 2.67
C9orf50-201ENST00000372478 CDC5LQ99459 802 aaKnown RBP31.71■■■□□ 2.67
C9orf50-201ENST00000372478 UBTFL1P0CB47 393 aaPredicted RBP31.7■■■□□ 2.66
C9orf50-201ENST00000372478 C9orf131Q5VYM1 1079 aa31.7■■■□□ 2.66
C9orf50-201ENST00000372478 FKBP4Q02790 459 aaKnown RBP eCLIP31.68■■■□□ 2.66
C9orf50-201ENST00000372478 PANK1Q8TE04 598 aa31.68■■■□□ 2.66
C9orf50-201ENST00000372478 RNF181Q9P0P0 153 aa31.68■■■□□ 2.66
C9orf50-201ENST00000372478 LTBP3Q9NS15 1303 aa31.68■■■□□ 2.66
C9orf50-201ENST00000372478 YY1P25490 414 aa31.67■■■□□ 2.66
C9orf50-201ENST00000372478 ANKRD44Q8N8A2 993 aa31.67■■■□□ 2.66
C9orf50-201ENST00000372478 LMNB1P20700 586 aa31.67■■■□□ 2.66
C9orf50-201ENST00000372478 ANKRD18BA2A2Z9 1011 aa31.66■■■□□ 2.66
C9orf50-201ENST00000372478 IFIT5Q13325 482 aaKnown RBP31.66■■■□□ 2.66
C9orf50-201ENST00000372478 ZNF277Q9NRM2 450 aaPredicted RBP31.66■■■□□ 2.66
C9orf50-201ENST00000372478 RABL6Q3YEC7 729 aaPredicted RBP31.65■■■□□ 2.66
C9orf50-201ENST00000372478 ITPRIPQ8IWB1 547 aa31.65■■■□□ 2.66
C9orf50-201ENST00000372478 GRIPAP1Q4V328 841 aa31.64■■■□□ 2.66
C9orf50-201ENST00000372478 MPNDQ8N594 471 aa31.64■■■□□ 2.66
C9orf50-201ENST00000372478 LRRFIP2Q9Y608 721 aaKnown RBP31.64■■■□□ 2.66
C9orf50-201ENST00000372478 DICER1Q9UPY3 1922 aaKnown RBP31.64■■■□□ 2.66
C9orf50-201ENST00000372478 IGHMBP2P38935 993 aaKnown RBP31.64■■■□□ 2.65
C9orf50-201ENST00000372478 CCDC57Q2TAC2 916 aa31.64■■■□□ 2.65
C9orf50-201ENST00000372478 DPP8Q6V1X1 898 aaPredicted RBP31.64■■■□□ 2.65
C9orf50-201ENST00000372478 PSMD1Q99460 953 aa31.64■■■□□ 2.65
C9orf50-201ENST00000372478 GNAI3P08754 354 aa31.63■■■□□ 2.65
C9orf50-201ENST00000372478 NSFL1CQ9UNZ2 370 aaKnown RBP31.63■■■□□ 2.65
C9orf50-201ENST00000372478 GPSM2P81274 684 aa31.62■■■□□ 2.65
C9orf50-201ENST00000372478 ZNF594Q96JF6 807 aaPredicted RBP31.62■■■□□ 2.65
C9orf50-201ENST00000372478 TIAM2Q8IVF5 1701 aa31.62■■■□□ 2.65
C9orf50-201ENST00000372478 LTBP1Q14766 1721 aa31.61■■■□□ 2.65
C9orf50-201ENST00000372478 MPHOSPH8Q99549 860 aa31.61■■■□□ 2.65
C9orf50-201ENST00000372478 DUOX1Q9NRD9 1551 aa31.61■■■□□ 2.65
C9orf50-201ENST00000372478 BSDC1Q9NW68 430 aaPredicted RBP31.61■■■□□ 2.65
C9orf50-201ENST00000372478 MS4A1P11836 297 aa31.6■■■□□ 2.65
C9orf50-201ENST00000372478 TAF7LQ5H9L4 462 aa31.6■■■□□ 2.65
C9orf50-201ENST00000372478 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.6■■■□□ 2.65
C9orf50-201ENST00000372478 MINPP1Q9UNW1 487 aa31.59■■■□□ 2.65
C9orf50-201ENST00000372478 HDAC5Q9UQL6 1122 aa31.59■■■□□ 2.65
C9orf50-201ENST00000372478 IARSP41252 1262 aaKnown RBP31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms