RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 C8orf58Q8NAV2 365 aa10.55□□□□□ -0.72
ATG4A-203ENST00000372232 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.55□□□□□ -0.72
ATG4A-203ENST00000372232 NDUFV2P19404 249 aa10.55□□□□□ -0.72
ATG4A-203ENST00000372232 RSBN1LQ6PCB5 846 aaPredicted RBP10.55□□□□□ -0.72
ATG4A-203ENST00000372232 NGDNQ8NEJ9 315 aaKnown RBP10.55□□□□□ -0.72
ATG4A-203ENST00000372232 DONSONQ9NYP3 566 aa10.55□□□□□ -0.72
ATG4A-203ENST00000372232 GNEQ9Y223 722 aaKnown RBP10.55□□□□□ -0.72
ATG4A-203ENST00000372232 ADGRG1Q9Y653 693 aa10.55□□□□□ -0.72
ATG4A-203ENST00000372232 KCNA6P17658 529 aa10.54□□□□□ -0.72
ATG4A-203ENST00000372232 CASQ1P31415 396 aa10.54□□□□□ -0.72
ATG4A-203ENST00000372232 DNAJC14Q6Y2X3 702 aaPredicted RBP10.54□□□□□ -0.72
ATG4A-203ENST00000372232 CABLES1Q8TDN4 633 aa10.54□□□□□ -0.72
ATG4A-203ENST00000372232 MAP3K19Q56UN5 1328 aa10.54□□□□□ -0.72
ATG4A-203ENST00000372232 PIK3R4Q99570 1358 aa10.54□□□□□ -0.72
ATG4A-203ENST00000372232 NALCNQ8IZF0 1738 aa10.53□□□□□ -0.72
ATG4A-203ENST00000372232 NDUFB9Q9Y6M9 179 aa10.53□□□□□ -0.72
ATG4A-203ENST00000372232 PEAK1Q9H792 1746 aa10.53□□□□□ -0.72
ATG4A-203ENST00000372232 ZBTB7BO15156 539 aaPredicted RBP10.53□□□□□ -0.72
ATG4A-203ENST00000372232 PLCD4Q9BRC7 762 aa10.53□□□□□ -0.72
ATG4A-203ENST00000372232 RAI14Q9P0K7 980 aa10.53□□□□□ -0.72
ATG4A-203ENST00000372232 KIF1CO43896 1103 aaKnown RBP10.52□□□□□ -0.72
ATG4A-203ENST00000372232 ATG7O95352 703 aa10.52□□□□□ -0.72
ATG4A-203ENST00000372232 XRN1Q8IZH2 1706 aaKnown RBP10.52□□□□□ -0.72
ATG4A-203ENST00000372232 SBNO1A3KN83 1393 aa10.52□□□□□ -0.73
ATG4A-203ENST00000372232 ANKARQ7Z5J8 1434 aa10.52□□□□□ -0.73
ATG4A-203ENST00000372232 DLG5Q8TDM6 1919 aa10.52□□□□□ -0.73
ATG4A-203ENST00000372232 CHL1O00533 1208 aa10.52□□□□□ -0.73
ATG4A-203ENST00000372232 SPTLC1O15269 473 aa10.52□□□□□ -0.73
ATG4A-203ENST00000372232 LILRB3O75022 631 aa10.52□□□□□ -0.73
ATG4A-203ENST00000372232 OATP04181 439 aa10.52□□□□□ -0.73
ATG4A-203ENST00000372232 DIXDC1Q155Q3 683 aa10.52□□□□□ -0.73
ATG4A-203ENST00000372232 CCDC125Q86Z20 511 aa10.52□□□□□ -0.73
ATG4A-203ENST00000372232 C17orf53Q8N3J3 647 aaPredicted RBP10.52□□□□□ -0.73
ATG4A-203ENST00000372232 ABCC4O15439 1325 aa10.52□□□□□ -0.73
ATG4A-203ENST00000372232 ARHGEF10O15013 1369 aa10.52□□□□□ -0.73
ATG4A-203ENST00000372232 GOLGA6L6A8MZA4 724 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 ZNF16P17020 682 aaPredicted RBP10.51□□□□□ -0.73
ATG4A-203ENST00000372232 MCTP1Q6DN14 999 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 MCM10Q7L590 875 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 PRR7Q8TB68 274 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 ALG2Q9H553 416 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 ZNF446Q9NWS9 450 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.51□□□□□ -0.73
ATG4A-203ENST00000372232 FLT4P35916 1363 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 K7ELQ4 463 aaPredicted RBP10.51□□□□□ -0.73
ATG4A-203ENST00000372232 SOCS7O14512 581 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 UVSSAQ2YD98 709 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 NFATC2IPQ8NCF5 419 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 KIAA1524Q8TCG1 905 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 GPT2Q8TD30 523 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 KIF1BPQ96EK5 621 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 TMEM121BQ9BXQ6 578 aaPredicted RBP10.51□□□□□ -0.73
ATG4A-203ENST00000372232 TMX1Q9H3N1 280 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 RGPD1P0DJD0 1748 aa10.51□□□□□ -0.73
ATG4A-203ENST00000372232 CYP2E1P05181 493 aaPredicted RBP10.5□□□□□ -0.73
ATG4A-203ENST00000372232 NUCB1Q02818 461 aa10.5□□□□□ -0.73
ATG4A-203ENST00000372232 API5Q9BZZ5 524 aaKnown RBP10.5□□□□□ -0.73
ATG4A-203ENST00000372232 TMEM63CQ9P1W3 806 aa10.5□□□□□ -0.73
ATG4A-203ENST00000372232 RBM27Q9P2N5 1060 aaKnown RBP10.5□□□□□ -0.73
ATG4A-203ENST00000372232 STRCQ7RTU9 1775 aa10.5□□□□□ -0.73
ATG4A-203ENST00000372232 SYCE3A1L190 88 aa10.5□□□□□ -0.73
ATG4A-203ENST00000372232 MAP2K1Q02750 393 aaPredicted RBP10.5□□□□□ -0.73
ATG4A-203ENST00000372232 PHLDB3Q6NSJ2 640 aa10.5□□□□□ -0.73
ATG4A-203ENST00000372232 ZNF397Q8NF99 534 aaPredicted RBP10.5□□□□□ -0.73
ATG4A-203ENST00000372232 TTC12Q9H892 705 aaPredicted RBP10.5□□□□□ -0.73
ATG4A-203ENST00000372232 MED4Q9NPJ6 270 aa10.5□□□□□ -0.73
ATG4A-203ENST00000372232 ATG3Q9NT62 314 aa10.5□□□□□ -0.73
ATG4A-203ENST00000372232 BOLA1Q9Y3E2 137 aa10.5□□□□□ -0.73
ATG4A-203ENST00000372232 PCDHGA10Q9Y5H3 936 aa10.5□□□□□ -0.73
ATG4A-203ENST00000372232 MAFBQ9Y5Q3 323 aaPredicted RBP10.5□□□□□ -0.73
ATG4A-203ENST00000372232 KDRP35968 1356 aa10.5□□□□□ -0.73
ATG4A-203ENST00000372232 MYO1CO00159 1063 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 AMPHP49418 695 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 NUCB2P80303 420 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 STK32AQ8WU08 396 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 EYA1Q99502 592 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 NOL10Q9BSC4 688 aaKnown RBP10.49□□□□□ -0.73
ATG4A-203ENST00000372232 CRB1P82279 1406 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 KIAA0232Q92628 1395 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 IGSF1Q8N6C5 1336 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 SMTNL1A8MU46 457 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 GOLIM4O00461 696 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 SMARCA5O60264 1052 aaPredicted RBP10.49□□□□□ -0.73
ATG4A-203ENST00000372232 CD44P16070 742 aaKnown RBP10.49□□□□□ -0.73
ATG4A-203ENST00000372232 GYS2P54840 703 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 MTHFSDQ2M296 383 aaKnown RBP10.49□□□□□ -0.73
ATG4A-203ENST00000372232 TSGA10IPQ3SY00 556 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 MNS1Q8NEH6 495 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 TSPY26PQ9H489 355 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 SH3BP1Q9Y3L3 701 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 JRKLQ9Y4A0 524 aa10.49□□□□□ -0.73
ATG4A-203ENST00000372232 NUTM2BA6NNL0 878 aaPredicted RBP10.48□□□□□ -0.73
ATG4A-203ENST00000372232 NUTM2EB1AL46 878 aaPredicted RBP10.48□□□□□ -0.73
ATG4A-203ENST00000372232 CLSTN1O94985 981 aa10.48□□□□□ -0.73
ATG4A-203ENST00000372232 KRT24Q2M2I5 525 aa10.48□□□□□ -0.73
ATG4A-203ENST00000372232 ANKLE2Q86XL3 938 aa10.48□□□□□ -0.73
ATG4A-203ENST00000372232 NUTM2AQ8IVF1 878 aaPredicted RBP10.48□□□□□ -0.73
ATG4A-203ENST00000372232 GPATCH11Q8N954 259 aa10.48□□□□□ -0.73
ATG4A-203ENST00000372232 RNF214Q8ND24 703 aa10.48□□□□□ -0.73
ATG4A-203ENST00000372232 GAS2L2Q8NHY3 880 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms