RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 LNPKQ9C0E8 428 aa22.75■■□□□ 1.23
VEGFA-206ENST00000372077 COPRSQ9NQ92 184 aa22.75■■□□□ 1.23
VEGFA-206ENST00000372077 HSP90AB4PQ58FF6 505 aa22.75■■□□□ 1.23
VEGFA-206ENST00000372077 PA2G4Q9UQ80 394 aaKnown RBP22.75■■□□□ 1.23
VEGFA-206ENST00000372077 PTPN12Q05209 780 aaKnown RBP22.74■■□□□ 1.23
VEGFA-206ENST00000372077 NYXQ9GZU5 481 aa22.74■■□□□ 1.23
VEGFA-206ENST00000372077 LAMB2P55268 1798 aa22.74■■□□□ 1.23
VEGFA-206ENST00000372077 PNPLA7Q6ZV29 1317 aa22.74■■□□□ 1.23
VEGFA-206ENST00000372077 DDX60Q8IY21 1712 aaKnown RBP22.73■■□□□ 1.23
VEGFA-206ENST00000372077 CTSWP56202 376 aa22.73■■□□□ 1.23
VEGFA-206ENST00000372077 NFIXQ14938 502 aa22.73■■□□□ 1.23
VEGFA-206ENST00000372077 SLC15A2Q16348 729 aa22.73■■□□□ 1.23
VEGFA-206ENST00000372077 TTLL11Q8NHH1 800 aa22.73■■□□□ 1.23
VEGFA-206ENST00000372077 HSP90B1P14625 803 aaKnown RBP22.73■■□□□ 1.23
VEGFA-206ENST00000372077 MYH3P11055 1940 aa22.73■■□□□ 1.23
VEGFA-206ENST00000372077 SLC10A5Q5PT55 438 aa22.72■■□□□ 1.23
VEGFA-206ENST00000372077 NUTM1Q86Y26 1132 aa22.72■■□□□ 1.23
VEGFA-206ENST00000372077 LRRCC1Q9C099 1032 aa22.72■■□□□ 1.23
VEGFA-206ENST00000372077 TM4SF1P30408 202 aa22.72■■□□□ 1.23
VEGFA-206ENST00000372077 STK32BQ9NY57 414 aa22.72■■□□□ 1.23
VEGFA-206ENST00000372077 CHMP3Q9Y3E7 222 aa22.72■■□□□ 1.23
VEGFA-206ENST00000372077 QSER1Q2KHR3 1735 aa22.71■■□□□ 1.23
VEGFA-206ENST00000372077 CARMIL3Q8ND23 1372 aa22.71■■□□□ 1.23
VEGFA-206ENST00000372077 APBB1O00213 710 aa22.71■■□□□ 1.23
VEGFA-206ENST00000372077 HCLS1P14317 486 aaPredicted RBP22.71■■□□□ 1.23
VEGFA-206ENST00000372077 ERFEQ4G0M1 354 aa22.71■■□□□ 1.23
VEGFA-206ENST00000372077 SMARCA5O60264 1052 aaPredicted RBP22.71■■□□□ 1.23
VEGFA-206ENST00000372077 KLHDC4Q8TBB5 520 aa22.71■■□□□ 1.23
VEGFA-206ENST00000372077 RHPN1Q8TCX5 695 aa22.7■■□□□ 1.22
VEGFA-206ENST00000372077 KIF1BPQ96EK5 621 aa22.7■■□□□ 1.22
VEGFA-206ENST00000372077 TPTE2Q6XPS3 522 aa22.7■■□□□ 1.22
VEGFA-206ENST00000372077 NBPF5PQ86XG9 351 aaPredicted RBP22.7■■□□□ 1.22
VEGFA-206ENST00000372077 G3BP1Q13283 466 aaKnown RBP eCLIP22.69■■□□□ 1.22
VEGFA-206ENST00000372077 ERC1Q8IUD2 1116 aa22.69■■□□□ 1.22
VEGFA-206ENST00000372077 CCDC57Q2TAC2 916 aa22.68■■□□□ 1.22
VEGFA-206ENST00000372077 NLGN1Q8N2Q7 840 aa22.67■■□□□ 1.22
VEGFA-206ENST00000372077 GREM2Q9H772 168 aa22.67■■□□□ 1.22
VEGFA-206ENST00000372077 ABCC12Q96J65 1359 aa22.67■■□□□ 1.22
VEGFA-206ENST00000372077 SASH1O94885 1247 aa22.67■■□□□ 1.22
VEGFA-206ENST00000372077 IFIT5Q13325 482 aaKnown RBP22.67■■□□□ 1.22
VEGFA-206ENST00000372077 OS9Q13438 667 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-206ENST00000372077 C16orf71Q8IYS4 520 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-206ENST00000372077 RTL9Q8NET4 1388 aa22.67■■□□□ 1.22
VEGFA-206ENST00000372077 SIL1Q9H173 461 aa22.67■■□□□ 1.22
VEGFA-206ENST00000372077 GTF2E1P29083 439 aaPredicted RBP22.66■■□□□ 1.22
VEGFA-206ENST00000372077 CCDC85AQ96PX6 553 aaPredicted RBP22.66■■□□□ 1.22
VEGFA-206ENST00000372077 ITGA6P23229 1130 aa22.66■■□□□ 1.22
VEGFA-206ENST00000372077 SF3B3Q15393 1217 aaKnown RBP22.66■■□□□ 1.22
VEGFA-206ENST00000372077 FBXO3Q9UK99 471 aa22.66■■□□□ 1.22
VEGFA-206ENST00000372077 ZNF594Q96JF6 807 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-206ENST00000372077 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-206ENST00000372077 ANKRD18BA2A2Z9 1011 aa22.64■■□□□ 1.22
VEGFA-206ENST00000372077 CIAO1O76071 339 aa22.64■■□□□ 1.22
VEGFA-206ENST00000372077 DDR1Q08345 913 aa22.64■■□□□ 1.22
VEGFA-206ENST00000372077 CCDC152Q4G0S7 254 aa22.64■■□□□ 1.22
VEGFA-206ENST00000372077 PLEKHM2Q8IWE5 1019 aa22.64■■□□□ 1.22
VEGFA-206ENST00000372077 POLRMTO00411 1230 aaKnown RBP22.64■■□□□ 1.21
VEGFA-206ENST00000372077 SERPINB2P05120 415 aa22.64■■□□□ 1.21
VEGFA-206ENST00000372077 ATG9AQ7Z3C6 839 aa22.64■■□□□ 1.21
VEGFA-206ENST00000372077 IL1RAPL2Q9NP60 686 aa22.64■■□□□ 1.21
VEGFA-206ENST00000372077 SALL3Q9BXA9 1300 aa22.64■■□□□ 1.21
VEGFA-206ENST00000372077 EYA2O00167 538 aa22.63■■□□□ 1.21
VEGFA-206ENST00000372077 RIC1Q4ADV7 1423 aa22.63■■□□□ 1.21
VEGFA-206ENST00000372077 OTUD7AQ8TE49 926 aaPredicted RBP22.63■■□□□ 1.21
VEGFA-206ENST00000372077 UPF1Q92900 1129 aaKnown RBP eCLIP22.63■■□□□ 1.211e-10■■□□□ 12.8
VEGFA-206ENST00000372077 PRR5LQ6MZQ0 368 aa22.63■■□□□ 1.21
VEGFA-206ENST00000372077 C3orf67Q6ZVT6 689 aa22.63■■□□□ 1.21
VEGFA-206ENST00000372077 CNBD1Q8NA66 436 aa22.63■■□□□ 1.21
VEGFA-206ENST00000372077 IL15P40933 162 aaPredicted RBP22.62■■□□□ 1.21
VEGFA-206ENST00000372077 GSE1Q14687 1217 aa22.62■■□□□ 1.21
VEGFA-206ENST00000372077 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.62■■□□□ 1.21
VEGFA-206ENST00000372077 CASZ1Q86V15 1759 aa22.62■■□□□ 1.21
VEGFA-206ENST00000372077 LRRC24Q50LG9 513 aa22.61■■□□□ 1.21
VEGFA-206ENST00000372077 NLRP3Q96P20 1036 aa22.61■■□□□ 1.21
VEGFA-206ENST00000372077 PUS3Q9BZE2 481 aaKnown RBP22.61■■□□□ 1.21
VEGFA-206ENST00000372077 CLASRPQ8N2M8 674 aaKnown RBP22.61■■□□□ 1.21
VEGFA-206ENST00000372077 MFAP1P55081 439 aaKnown RBP22.6■■□□□ 1.21
VEGFA-206ENST00000372077 TAF7LQ5H9L4 462 aa22.6■■□□□ 1.21
VEGFA-206ENST00000372077 OSBPL3Q9H4L5 887 aa22.6■■□□□ 1.21
VEGFA-206ENST00000372077 NRXN2Q9P2S2 1712 aa22.6■■□□□ 1.21
VEGFA-206ENST00000372077 LRP5O75197 1615 aa22.6■■□□□ 1.21
VEGFA-206ENST00000372077 CCDC24Q8N4L8 307 aa22.59■■□□□ 1.21
VEGFA-206ENST00000372077 SEC31BQ9NQW1 1179 aa22.59■■□□□ 1.21
VEGFA-206ENST00000372077 TFCP2Q12800 502 aa22.59■■□□□ 1.21
VEGFA-206ENST00000372077 STAP2Q9UGK3 403 aa22.58■■□□□ 1.21
VEGFA-206ENST00000372077 RIPOR2Q9Y4F9 1068 aa22.58■■□□□ 1.21
VEGFA-206ENST00000372077 TNRC6CQ9HCJ0 1690 aaKnown RBP22.58■■□□□ 1.21
VEGFA-206ENST00000372077 NPHP1O15259 732 aa22.58■■□□□ 1.21
VEGFA-206ENST00000372077 PDE1AP54750 535 aa22.58■■□□□ 1.21
VEGFA-206ENST00000372077 ST5P78524 1137 aa22.57■■□□□ 1.2
VEGFA-206ENST00000372077 LDHAL6AQ6ZMR3 332 aa22.57■■□□□ 1.2
VEGFA-206ENST00000372077 EAF2Q96CJ1 260 aaPredicted RBP22.57■■□□□ 1.2
VEGFA-206ENST00000372077 GPR108Q9NPR9 543 aa22.57■■□□□ 1.2
VEGFA-206ENST00000372077 MX1P20591 662 aa22.56■■□□□ 1.2
VEGFA-206ENST00000372077 MMP10P09238 476 aa22.56■■□□□ 1.2
VEGFA-206ENST00000372077 CDC5LQ99459 802 aaKnown RBP22.55■■□□□ 1.2
VEGFA-206ENST00000372077 EIF5BO60841 1220 aaKnown RBP22.55■■□□□ 1.2
VEGFA-206ENST00000372077 TNNI3KQ59H18 835 aa22.55■■□□□ 1.2
VEGFA-206ENST00000372077 MSL1Q68DK7 614 aa22.55■■□□□ 1.2
VEGFA-206ENST00000372077 AACSQ86V21 672 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms