RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 SETDB2Q96T68 719 aa13.91□□□□□ -0.18
TSPAN1-201ENST00000372003 DCTPP1Q9H773 170 aa13.91□□□□□ -0.18
TSPAN1-201ENST00000372003 TM4SF1P30408 202 aa13.9□□□□□ -0.18
TSPAN1-201ENST00000372003 TCIRG1Q13488 830 aa13.9□□□□□ -0.18
TSPAN1-201ENST00000372003 INTS3Q68E01 1043 aaKnown RBP13.9□□□□□ -0.18
TSPAN1-201ENST00000372003 PDLIM2Q96JY6 352 aa13.9□□□□□ -0.18
TSPAN1-201ENST00000372003 MYD88Q99836 296 aa13.9□□□□□ -0.18
TSPAN1-201ENST00000372003 PARP3Q9Y6F1 533 aa13.9□□□□□ -0.18
TSPAN1-201ENST00000372003 TTC22Q5TAA0 569 aa13.9□□□□□ -0.19
TSPAN1-201ENST00000372003 CASC1Q6TDU7 716 aa13.9□□□□□ -0.19
TSPAN1-201ENST00000372003 SLC4A10Q6U841 1118 aa13.9□□□□□ -0.19
TSPAN1-201ENST00000372003 KIAA1211Q6ZU35 1233 aa13.9□□□□□ -0.19
TSPAN1-201ENST00000372003 PKNOX2Q96KN3 472 aa13.9□□□□□ -0.19
TSPAN1-201ENST00000372003 NOL7Q9UMY1 257 aaKnown RBP13.9□□□□□ -0.19
TSPAN1-201ENST00000372003 ADCY9O60503 1353 aa13.89□□□□□ -0.19
TSPAN1-201ENST00000372003 NPHP1O15259 732 aa13.89□□□□□ -0.19
TSPAN1-201ENST00000372003 PTGER2P43116 358 aa13.89□□□□□ -0.19
TSPAN1-201ENST00000372003 DDR1Q08345 913 aa13.89□□□□□ -0.19
TSPAN1-201ENST00000372003 HSP90AB3PQ58FF7 597 aa13.89□□□□□ -0.19
TSPAN1-201ENST00000372003 PLEKHM2Q8IWE5 1019 aa13.89□□□□□ -0.19
TSPAN1-201ENST00000372003 SIRT2Q8IXJ6 389 aa13.89□□□□□ -0.19
TSPAN1-201ENST00000372003 DNAAF4Q8WXU2 420 aa13.89□□□□□ -0.19
TSPAN1-201ENST00000372003 METTL22Q9BUU2 404 aaPredicted RBP13.89□□□□□ -0.19
TSPAN1-201ENST00000372003 USP26Q9BXU7 913 aa13.89□□□□□ -0.19
TSPAN1-201ENST00000372003 LMBRD1Q9NUN5 540 aa13.89□□□□□ -0.19
TSPAN1-201ENST00000372003 POLRMTO00411 1230 aaKnown RBP13.88□□□□□ -0.19
TSPAN1-201ENST00000372003 ST18O60284 1047 aa13.88□□□□□ -0.19
TSPAN1-201ENST00000372003 SERPINB2P05120 415 aa13.88□□□□□ -0.19
TSPAN1-201ENST00000372003 CSPP1Q1MSJ5 1256 aa13.88□□□□□ -0.19
TSPAN1-201ENST00000372003 MTERF4Q7Z6M4 381 aaKnown RBP13.88□□□□□ -0.19
TSPAN1-201ENST00000372003 RPAP2Q8IXW5 612 aaPredicted RBP13.88□□□□□ -0.19
TSPAN1-201ENST00000372003 ZNF34Q8IZ26 560 aa13.88□□□□□ -0.19
TSPAN1-201ENST00000372003 CCDC24Q8N4L8 307 aa13.88□□□□□ -0.19
TSPAN1-201ENST00000372003 PTPRCP08575 1304 aa13.88□□□□□ -0.19
TSPAN1-201ENST00000372003 C4AP0C0L4 1744 aa13.87□□□□□ -0.19
TSPAN1-201ENST00000372003 NEXNQ0ZGT2 675 aa13.87□□□□□ -0.19
TSPAN1-201ENST00000372003 SUSD4Q5VX71 490 aa13.87□□□□□ -0.19
TSPAN1-201ENST00000372003 NBPF5PQ86XG9 351 aaPredicted RBP13.87□□□□□ -0.19
TSPAN1-201ENST00000372003 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
TSPAN1-201ENST00000372003 SGIP1Q9BQI5 828 aa13.87□□□□□ -0.19
TSPAN1-201ENST00000372003 PPP1R1BQ9UD71 204 aaPredicted RBP13.87□□□□□ -0.19
TSPAN1-201ENST00000372003 CASZ1Q86V15 1759 aa13.87□□□□□ -0.19
TSPAN1-201ENST00000372003 UBN2Q6ZU65 1347 aa13.87□□□□□ -0.19
TSPAN1-201ENST00000372003 QSER1Q2KHR3 1735 aa13.87□□□□□ -0.19
TSPAN1-201ENST00000372003 RGL2O15211 777 aa13.86□□□□□ -0.19
TSPAN1-201ENST00000372003 GSPT1P15170 499 aaKnown RBP13.86□□□□□ -0.19
TSPAN1-201ENST00000372003 GTF2E1P29083 439 aaPredicted RBP13.86□□□□□ -0.19
TSPAN1-201ENST00000372003 CWF19L2Q2TBE0 894 aaKnown RBP13.86□□□□□ -0.19
TSPAN1-201ENST00000372003 ZSCAN23Q3MJ62 389 aa13.86□□□□□ -0.19
TSPAN1-201ENST00000372003 REC8O95072 547 aa13.86□□□□□ -0.19
TSPAN1-201ENST00000372003 IGKV5-2P06315 115 aa13.86□□□□□ -0.19
TSPAN1-201ENST00000372003 MCM2P49736 904 aa13.86□□□□□ -0.19
TSPAN1-201ENST00000372003 NLRP10Q86W26 655 aa13.86□□□□□ -0.19
TSPAN1-201ENST00000372003 ISCA1Q9BUE6 129 aa13.86□□□□□ -0.19
TSPAN1-201ENST00000372003 CARMIL3Q8ND23 1372 aa13.85□□□□□ -0.19
TSPAN1-201ENST00000372003 MBD3O95983 291 aa13.85□□□□□ -0.19
TSPAN1-201ENST00000372003 PARP10Q53GL7 1025 aa13.85□□□□□ -0.19
TSPAN1-201ENST00000372003 TPTE2Q6XPS3 522 aa13.85□□□□□ -0.19
TSPAN1-201ENST00000372003 NUTM1Q86Y26 1132 aa13.85□□□□□ -0.19
TSPAN1-201ENST00000372003 ANKRD44Q8N8A2 993 aa13.85□□□□□ -0.19
TSPAN1-201ENST00000372003 JARID2Q92833 1246 aaPredicted RBP13.85□□□□□ -0.19
TSPAN1-201ENST00000372003 ZMYND15Q9H091 742 aa13.85□□□□□ -0.19
TSPAN1-201ENST00000372003 ATP10DQ9P241 1426 aa13.84□□□□□ -0.19
TSPAN1-201ENST00000372003 BEND3Q5T5X7 828 aa13.84□□□□□ -0.19
TSPAN1-201ENST00000372003 MCTP1Q6DN14 999 aa13.84□□□□□ -0.19
TSPAN1-201ENST00000372003 PPP1R42Q7Z4L9 355 aa13.84□□□□□ -0.19
TSPAN1-201ENST00000372003 CNBD1Q8NA66 436 aa13.84□□□□□ -0.19
TSPAN1-201ENST00000372003 UTP14AQ9BVJ6 771 aaKnown RBP13.84□□□□□ -0.19
TSPAN1-201ENST00000372003 TRMT112Q9UI30 125 aaKnown RBP13.84□□□□□ -0.19
TSPAN1-201ENST00000372003 NEURL1BA8MQ27 555 aa13.83□□□□□ -0.2
TSPAN1-201ENST00000372003 PRR5LQ6MZQ0 368 aa13.83□□□□□ -0.2
TSPAN1-201ENST00000372003 LRSAM1Q6UWE0 723 aa13.83□□□□□ -0.2
TSPAN1-201ENST00000372003 SYNE4Q8N205 404 aa13.83□□□□□ -0.2
TSPAN1-201ENST00000372003 LINS1Q8NG48 757 aa13.83□□□□□ -0.2
TSPAN1-201ENST00000372003 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
TSPAN1-201ENST00000372003 CWC25Q9NXE8 425 aaPredicted RBP13.83□□□□□ -0.2
TSPAN1-201ENST00000372003 SCN7AQ01118 1682 aa13.83□□□□□ -0.2
TSPAN1-201ENST00000372003 TRIM28Q13263 835 aaKnown RBP13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 ERFEQ4G0M1 354 aa13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 CCDC191Q8NCU4 936 aa13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 FAM89AQ96GI7 184 aa13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 SRCIN1Q9C0H9 1055 aa13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 NYXQ9GZU5 481 aa13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 CCDC39Q9UFE4 941 aa13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 ZKSCAN5Q9Y2L8 839 aa13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 NTSR2O95665 410 aa13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 ST5P78524 1137 aa13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 CAVIN1Q6NZI2 390 aaKnown RBP13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 OSBPL3Q9H4L5 887 aa13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 C1orf115Q9H7X2 142 aa13.82□□□□□ -0.2
TSPAN1-201ENST00000372003 AK9Q5TCS8 1911 aa13.81□□□□□ -0.2
TSPAN1-201ENST00000372003 GCKRQ14397 625 aa13.81□□□□□ -0.2
TSPAN1-201ENST00000372003 RBSNQ9H1K0 784 aa13.81□□□□□ -0.2
TSPAN1-201ENST00000372003 BCORQ6W2J9 1755 aa13.8□□□□□ -0.2
TSPAN1-201ENST00000372003 SH3TC1Q8TE82 1336 aa13.8□□□□□ -0.2
TSPAN1-201ENST00000372003 DYNC1I1O14576 645 aa13.8□□□□□ -0.2
TSPAN1-201ENST00000372003 EPB41L2O43491 1005 aaKnown RBP13.8□□□□□ -0.2
TSPAN1-201ENST00000372003 ZBTB38Q8NAP3 1195 aaPredicted RBP13.8□□□□□ -0.2
TSPAN1-201ENST00000372003 IL17RAQ96F46 866 aa13.8□□□□□ -0.2
TSPAN1-201ENST00000372003 FHDC1Q9C0D6 1143 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms