RNA–Protein interactions for RNA: ENST00000371520.5

ECHDC2-202, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 1,606 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-202ENST00000371520 COL23A1Q86Y22 540 aaPredicted RBP24.66■■□□□ 1.54
ECHDC2-202ENST00000371520 CCDC125Q86Z20 511 aa24.66■■□□□ 1.54
ECHDC2-202ENST00000371520 G3BP1Q13283 466 aaKnown RBP eCLIP24.65■■□□□ 1.54
ECHDC2-202ENST00000371520 SIL1Q9H173 461 aa24.65■■□□□ 1.54
ECHDC2-202ENST00000371520 PNPLA7Q6ZV29 1317 aa24.65■■□□□ 1.54
ECHDC2-202ENST00000371520 LRP5O75197 1615 aa24.65■■□□□ 1.54
ECHDC2-202ENST00000371520 CCDC57Q2TAC2 916 aa24.64■■□□□ 1.54
ECHDC2-202ENST00000371520 ERFEQ4G0M1 354 aa24.64■■□□□ 1.54
ECHDC2-202ENST00000371520 NBPF5PQ86XG9 351 aaPredicted RBP24.64■■□□□ 1.54
ECHDC2-202ENST00000371520 ABCC12Q96J65 1359 aa24.64■■□□□ 1.54
ECHDC2-202ENST00000371520 C16orf71Q8IYS4 520 aaPredicted RBP24.64■■□□□ 1.53
ECHDC2-202ENST00000371520 GREM2Q9H772 168 aa24.64■■□□□ 1.53
ECHDC2-202ENST00000371520 IFIT5Q13325 482 aaKnown RBP24.63■■□□□ 1.53
ECHDC2-202ENST00000371520 SLC15A2Q16348 729 aa24.63■■□□□ 1.53
ECHDC2-202ENST00000371520 SLC10A5Q5PT55 438 aa24.63■■□□□ 1.53
ECHDC2-202ENST00000371520 CCDC85AQ96PX6 553 aaPredicted RBP24.63■■□□□ 1.53
ECHDC2-202ENST00000371520 IL1RAPL2Q9NP60 686 aa24.63■■□□□ 1.53
ECHDC2-202ENST00000371520 RTL9Q8NET4 1388 aa24.63■■□□□ 1.53
ECHDC2-202ENST00000371520 SASH1O94885 1247 aa24.62■■□□□ 1.53
ECHDC2-202ENST00000371520 TPTE2Q6XPS3 522 aa24.62■■□□□ 1.53
ECHDC2-202ENST00000371520 PLEKHM2Q8IWE5 1019 aa24.62■■□□□ 1.53
ECHDC2-202ENST00000371520 OTUD7AQ8TE49 926 aaPredicted RBP24.62■■□□□ 1.53
ECHDC2-202ENST00000371520 STK32BQ9NY57 414 aa24.62■■□□□ 1.53
ECHDC2-202ENST00000371520 TNRC6CQ9HCJ0 1690 aaKnown RBP24.62■■□□□ 1.53
ECHDC2-202ENST00000371520 TM4SF1P30408 202 aa24.61■■□□□ 1.53
ECHDC2-202ENST00000371520 ILDR2Q71H61 639 aa24.61■■□□□ 1.53
ECHDC2-202ENST00000371520 SALL3Q9BXA9 1300 aa24.61■■□□□ 1.53
ECHDC2-202ENST00000371520 SPEF2Q9C093 1822 aa24.61■■□□□ 1.53
ECHDC2-202ENST00000371520 NRXN2Q9P2S2 1712 aa24.61■■□□□ 1.53
ECHDC2-202ENST00000371520 ITGA6P23229 1130 aa24.61■■□□□ 1.53
ECHDC2-202ENST00000371520 GTF2E1P29083 439 aaPredicted RBP24.61■■□□□ 1.53
ECHDC2-202ENST00000371520 FBXO3Q9UK99 471 aa24.61■■□□□ 1.53
ECHDC2-202ENST00000371520 RIC1Q4ADV7 1423 aa24.6■■□□□ 1.53
ECHDC2-202ENST00000371520 CIAO1O76071 339 aa24.6■■□□□ 1.53
ECHDC2-202ENST00000371520 ZNF594Q96JF6 807 aaPredicted RBP24.6■■□□□ 1.53
ECHDC2-202ENST00000371520 BCL11AQ9H165 835 aa24.6■■□□□ 1.53
ECHDC2-202ENST00000371520 ANKRD18BA2A2Z9 1011 aa24.59■■□□□ 1.53
ECHDC2-202ENST00000371520 CCDC152Q4G0S7 254 aa24.59■■□□□ 1.53
ECHDC2-202ENST00000371520 ATG9AQ7Z3C6 839 aa24.59■■□□□ 1.53
ECHDC2-202ENST00000371520 EYA2O00167 538 aa24.58■■□□□ 1.53
ECHDC2-202ENST00000371520 MSH5O43196 834 aa24.58■■□□□ 1.53
ECHDC2-202ENST00000371520 CLASRPQ8N2M8 674 aaKnown RBP24.58■■□□□ 1.53
ECHDC2-202ENST00000371520 IL15P40933 162 aaPredicted RBP24.57■■□□□ 1.52
ECHDC2-202ENST00000371520 SF3B3Q15393 1217 aaKnown RBP24.57■■□□□ 1.52
ECHDC2-202ENST00000371520 TAF7LQ5H9L4 462 aa24.57■■□□□ 1.52
ECHDC2-202ENST00000371520 NLGN1Q8N2Q7 840 aa24.57■■□□□ 1.52
ECHDC2-202ENST00000371520 CNBD1Q8NA66 436 aa24.57■■□□□ 1.52
ECHDC2-202ENST00000371520 DDR1Q08345 913 aa24.57■■□□□ 1.52
ECHDC2-202ENST00000371520 OSBPL3Q9H4L5 887 aa24.57■■□□□ 1.52
ECHDC2-202ENST00000371520 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.57■■□□□ 1.52
ECHDC2-202ENST00000371520 MX1P20591 662 aa24.56■■□□□ 1.52
ECHDC2-202ENST00000371520 LRRC24Q50LG9 513 aa24.56■■□□□ 1.52
ECHDC2-202ENST00000371520 C3orf67Q6ZVT6 689 aa24.56■■□□□ 1.52
ECHDC2-202ENST00000371520 POLRMTO00411 1230 aaKnown RBP24.55■■□□□ 1.52
ECHDC2-202ENST00000371520 SERPINB2P05120 415 aa24.55■■□□□ 1.52
ECHDC2-202ENST00000371520 PDE1AP54750 535 aa24.55■■□□□ 1.52
ECHDC2-202ENST00000371520 PRR5LQ6MZQ0 368 aa24.55■■□□□ 1.52
ECHDC2-202ENST00000371520 PUS3Q9BZE2 481 aaKnown RBP24.55■■□□□ 1.52
ECHDC2-202ENST00000371520 TAF1P21675 1872 aa24.55■■□□□ 1.52
ECHDC2-202ENST00000371520 NPHP1O15259 732 aa24.54■■□□□ 1.52
ECHDC2-202ENST00000371520 TFCP2Q12800 502 aa24.54■■□□□ 1.52
ECHDC2-202ENST00000371520 BMP2KLQ5H9B9 411 aa24.54■■□□□ 1.52
ECHDC2-202ENST00000371520 STAP2Q9UGK3 403 aa24.54■■□□□ 1.52
ECHDC2-202ENST00000371520 COL4A1P02462 1669 aa24.54■■□□□ 1.52
ECHDC2-202ENST00000371520 NLRP3Q96P20 1036 aa24.53■■□□□ 1.52
ECHDC2-202ENST00000371520 AOX1Q06278 1338 aa24.53■■□□□ 1.52
ECHDC2-202ENST00000371520 TTC22Q5TAA0 569 aa24.53■■□□□ 1.52
ECHDC2-202ENST00000371520 EAF2Q96CJ1 260 aaPredicted RBP24.53■■□□□ 1.52
ECHDC2-202ENST00000371520 SEC31BQ9NQW1 1179 aa24.53■■□□□ 1.52
ECHDC2-202ENST00000371520 ANKRD31Q8N7Z5 1873 aa24.53■■□□□ 1.52
ECHDC2-202ENST00000371520 A0A1B0GUL6 1792 aa24.52■■□□□ 1.52
ECHDC2-202ENST00000371520 LDHAL6AQ6ZMR3 332 aa24.52■■□□□ 1.52
ECHDC2-202ENST00000371520 AACSQ86V21 672 aa24.52■■□□□ 1.52
ECHDC2-202ENST00000371520 CCDC24Q8N4L8 307 aa24.52■■□□□ 1.52
ECHDC2-202ENST00000371520 TNNI3KQ59H18 835 aa24.51■■□□□ 1.51
ECHDC2-202ENST00000371520 GPR108Q9NPR9 543 aa24.51■■□□□ 1.51
ECHDC2-202ENST00000371520 RIPOR2Q9Y4F9 1068 aa24.51■■□□□ 1.51
ECHDC2-202ENST00000371520 FPGT-TNNI3KV9GXZ4 949 aa24.51■■□□□ 1.51
ECHDC2-202ENST00000371520 ZNF609O15014 1411 aa24.51■■□□□ 1.51
ECHDC2-202ENST00000371520 IFIT2P09913 472 aaKnown RBP24.5■■□□□ 1.51
ECHDC2-202ENST00000371520 GSPT1P15170 499 aaKnown RBP24.5■■□□□ 1.51
ECHDC2-202ENST00000371520 ST5P78524 1137 aa24.5■■□□□ 1.51
ECHDC2-202ENST00000371520 C8orf34Q49A92 452 aa24.5■■□□□ 1.51
ECHDC2-202ENST00000371520 CDC5LQ99459 802 aaKnown RBP24.5■■□□□ 1.51
ECHDC2-202ENST00000371520 CNNM1Q9NRU3 951 aa24.5■■□□□ 1.51
ECHDC2-202ENST00000371520 TSHZ3Q63HK5 1081 aa24.49■■□□□ 1.51
ECHDC2-202ENST00000371520 TTC41PQ6P2S7 1318 aa24.48■■□□□ 1.51
ECHDC2-202ENST00000371520 AK9Q5TCS8 1911 aa24.48■■□□□ 1.51
ECHDC2-202ENST00000371520 MMP10P09238 476 aa24.48■■□□□ 1.51
ECHDC2-202ENST00000371520 BACH2Q9BYV9 841 aa24.48■■□□□ 1.51
ECHDC2-202ENST00000371520 CEP126Q9P2H0 1117 aa24.48■■□□□ 1.51
ECHDC2-202ENST00000371520 ARAP2Q8WZ64 1704 aa24.47■■□□□ 1.51
ECHDC2-202ENST00000371520 IGHMBP2P38935 993 aaKnown RBP24.47■■□□□ 1.51
ECHDC2-202ENST00000371520 MSL1Q68DK7 614 aa24.47■■□□□ 1.51
ECHDC2-202ENST00000371520 UPF1Q92900 1129 aaKnown RBP eCLIP24.47■■□□□ 1.51
ECHDC2-202ENST00000371520 CCDC8Q9H0W5 538 aaPredicted RBP24.47■■□□□ 1.51
ECHDC2-202ENST00000371520 PI4K2BQ8TCG2 481 aa24.46■■□□□ 1.51
ECHDC2-202ENST00000371520 GPATCH3Q96I76 525 aa24.46■■□□□ 1.51
ECHDC2-202ENST00000371520 MPHOSPH8Q99549 860 aa24.46■■□□□ 1.51
ECHDC2-202ENST00000371520 TLR7Q9NYK1 1049 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms