RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 LAMB2P55268 1798 aa20.5■□□□□ 0.87
SCP2-201ENST00000371509 PRR5LQ6MZQ0 368 aa20.5■□□□□ 0.87
SCP2-201ENST00000371509 MYH3P11055 1940 aa20.49■□□□□ 0.87
SCP2-201ENST00000371509 PNMA6EA0A0J9YXQ4 647 aa20.49■□□□□ 0.87
SCP2-201ENST00000371509 HMMRO75330 724 aa20.49■□□□□ 0.87
SCP2-201ENST00000371509 SLC16A10Q8TF71 515 aa20.49■□□□□ 0.87
SCP2-201ENST00000371509 DDRGK1Q96HY6 314 aa20.49■□□□□ 0.87
SCP2-201ENST00000371509 PARP3Q9Y6F1 533 aa20.49■□□□□ 0.87
SCP2-201ENST00000371509 HDAC5Q9UQL6 1122 aa20.48■□□□□ 0.87
SCP2-201ENST00000371509 ATF5Q9Y2D1 282 aaPredicted RBP20.48■□□□□ 0.87
SCP2-201ENST00000371509 BMP2KLQ5H9B9 411 aa20.47■□□□□ 0.87
SCP2-201ENST00000371509 LMBR1LQ6UX01 489 aa20.47■□□□□ 0.87
SCP2-201ENST00000371509 C3orf67Q6ZVT6 689 aa20.47■□□□□ 0.87
SCP2-201ENST00000371509 CHMP3Q9Y3E7 222 aa20.47■□□□□ 0.87
SCP2-201ENST00000371509 TNRC6CQ9HCJ0 1690 aaKnown RBP20.47■□□□□ 0.87
SCP2-201ENST00000371509 NRXN2Q9P2S2 1712 aa20.47■□□□□ 0.87
SCP2-201ENST00000371509 PDE8AO60658 829 aa20.47■□□□□ 0.87
SCP2-201ENST00000371509 PLA2G12BQ9BX93 195 aa20.47■□□□□ 0.87
SCP2-201ENST00000371509 SRGAP3O43295 1099 aa20.46■□□□□ 0.87
SCP2-201ENST00000371509 CTSWP56202 376 aa20.46■□□□□ 0.87
SCP2-201ENST00000371509 ATP8B2P98198 1209 aa20.46■□□□□ 0.87
SCP2-201ENST00000371509 ZBTB47Q9UFB7 747 aaPredicted RBP20.46■□□□□ 0.87
SCP2-201ENST00000371509 RABL6Q3YEC7 729 aaPredicted RBP20.45■□□□□ 0.86
SCP2-201ENST00000371509 MTFR1LQ9H019 292 aa20.45■□□□□ 0.86
SCP2-201ENST00000371509 ST5P78524 1137 aa20.45■□□□□ 0.86
SCP2-201ENST00000371509 SLC10A5Q5PT55 438 aa20.44■□□□□ 0.86
SCP2-201ENST00000371509 TTLL11Q8NHH1 800 aa20.44■□□□□ 0.86
SCP2-201ENST00000371509 SOCS7O14512 581 aa20.43■□□□□ 0.86
SCP2-201ENST00000371509 ANP32EQ9BTT0 268 aa20.43■□□□□ 0.86
SCP2-201ENST00000371509 ANKRD31Q8N7Z5 1873 aa20.43■□□□□ 0.86
SCP2-201ENST00000371509 CSF1RP07333 972 aa20.43■□□□□ 0.86
SCP2-201ENST00000371509 MTX1Q13505 466 aa20.43■□□□□ 0.86
SCP2-201ENST00000371509 PLEKHM2Q8IWE5 1019 aa20.43■□□□□ 0.86
SCP2-201ENST00000371509 KLHDC4Q8TBB5 520 aa20.43■□□□□ 0.86
SCP2-201ENST00000371509 GREM2Q9H772 168 aa20.43■□□□□ 0.86
SCP2-201ENST00000371509 NLRP3Q96P20 1036 aa20.42■□□□□ 0.86
SCP2-201ENST00000371509 TAF1P21675 1872 aa20.42■□□□□ 0.86
SCP2-201ENST00000371509 SSH3Q8TE77 659 aa20.41■□□□□ 0.86
SCP2-201ENST00000371509 TBC1D32Q96NH3 1257 aa20.41■□□□□ 0.86
SCP2-201ENST00000371509 HSP90B1P14625 803 aaKnown RBP20.41■□□□□ 0.86
SCP2-201ENST00000371509 POLA2Q14181 598 aa20.41■□□□□ 0.86
SCP2-201ENST00000371509 PA2G4Q9UQ80 394 aaKnown RBP20.41■□□□□ 0.86
SCP2-201ENST00000371509 UPF2Q9HAU5 1272 aaKnown RBP20.4■□□□□ 0.86
SCP2-201ENST00000371509 COL4A1P02462 1669 aa20.39■□□□□ 0.86
SCP2-201ENST00000371509 ITGA6P23229 1130 aa20.39■□□□□ 0.86
SCP2-201ENST00000371509 RFX5P48382 616 aaPredicted RBP20.39■□□□□ 0.86
SCP2-201ENST00000371509 ZNF594Q96JF6 807 aaPredicted RBP20.39■□□□□ 0.86
SCP2-201ENST00000371509 SEC31BQ9NQW1 1179 aa20.39■□□□□ 0.86
SCP2-201ENST00000371509 CCDC152Q4G0S7 254 aa20.39■□□□□ 0.85
SCP2-201ENST00000371509 POLD1P28340 1107 aa20.38■□□□□ 0.85
SCP2-201ENST00000371509 IFIT5Q13325 482 aaKnown RBP20.38■□□□□ 0.85
SCP2-201ENST00000371509 SF3B3Q15393 1217 aaKnown RBP20.38■□□□□ 0.85
SCP2-201ENST00000371509 CCDC57Q2TAC2 916 aa20.38■□□□□ 0.85
SCP2-201ENST00000371509 SIL1Q9H173 461 aa20.38■□□□□ 0.85
SCP2-201ENST00000371509 EXOC6BQ9Y2D4 811 aa20.38■□□□□ 0.85
SCP2-201ENST00000371509 SPEF2Q9C093 1822 aa20.38■□□□□ 0.85
SCP2-201ENST00000371509 SMARCA5O60264 1052 aaPredicted RBP20.37■□□□□ 0.85
SCP2-201ENST00000371509 BRIP1Q9BX63 1249 aa20.37■□□□□ 0.85
SCP2-201ENST00000371509 AK9Q5TCS8 1911 aa20.37■□□□□ 0.85
SCP2-201ENST00000371509 RIC1Q4ADV7 1423 aa20.37■□□□□ 0.85
SCP2-201ENST00000371509 GSPT1P15170 499 aaKnown RBP20.37■□□□□ 0.85
SCP2-201ENST00000371509 PTPN12Q05209 780 aaKnown RBP20.37■□□□□ 0.85
SCP2-201ENST00000371509 TTC22Q5TAA0 569 aa20.37■□□□□ 0.85
SCP2-201ENST00000371509 SGIP1Q9BQI5 828 aa20.37■□□□□ 0.85
SCP2-201ENST00000371509 COL11A2P13942 1736 aaPredicted RBP20.36■□□□□ 0.85
SCP2-201ENST00000371509 ANKRD18BA2A2Z9 1011 aa20.36■□□□□ 0.85
SCP2-201ENST00000371509 APBB1O00213 710 aa20.36■□□□□ 0.85
SCP2-201ENST00000371509 SURF6O75683 361 aaKnown RBP20.36■□□□□ 0.85
SCP2-201ENST00000371509 PTGER2P43116 358 aa20.36■□□□□ 0.85
SCP2-201ENST00000371509 C16orf71Q8IYS4 520 aaPredicted RBP20.36■□□□□ 0.85
SCP2-201ENST00000371509 OTUD7AQ8TE49 926 aaPredicted RBP20.36■□□□□ 0.85
SCP2-201ENST00000371509 TAF7LQ5H9L4 462 aa20.35■□□□□ 0.85
SCP2-201ENST00000371509 BCL11AQ9H165 835 aa20.35■□□□□ 0.85
SCP2-201ENST00000371509 SALL3Q9BXA9 1300 aa20.34■□□□□ 0.85
SCP2-201ENST00000371509 C10orf71Q711Q0 1435 aa20.34■□□□□ 0.85
SCP2-201ENST00000371509 CRY2Q49AN0 593 aa20.34■□□□□ 0.85
SCP2-201ENST00000371509 PDE6BP35913 854 aa20.33■□□□□ 0.85
SCP2-201ENST00000371509 RPGRQ92834 1020 aaKnown RBP20.33■□□□□ 0.85
SCP2-201ENST00000371509 CELF1Q92879 486 aaKnown RBP20.33■□□□□ 0.85
SCP2-201ENST00000371509 PUS3Q9BZE2 481 aaKnown RBP20.33■□□□□ 0.85
SCP2-201ENST00000371509 OSBPL3Q9H4L5 887 aa20.33■□□□□ 0.85
SCP2-201ENST00000371509 COPRSQ9NQ92 184 aa20.33■□□□□ 0.85
SCP2-201ENST00000371509 DAXXQ9UER7 740 aaPredicted RBP20.33■□□□□ 0.85
SCP2-201ENST00000371509 RTL9Q8NET4 1388 aa20.33■□□□□ 0.84
SCP2-201ENST00000371509 KLRG2A4D1S0 409 aaPredicted RBP20.33■□□□□ 0.84
SCP2-201ENST00000371509 MFAP1P55081 439 aaKnown RBP20.33■□□□□ 0.84
SCP2-201ENST00000371509 LRRC24Q50LG9 513 aa20.33■□□□□ 0.84
SCP2-201ENST00000371509 DDX46Q7L014 1031 aaKnown RBP20.33■□□□□ 0.84
SCP2-201ENST00000371509 LRRCC1Q9C099 1032 aa20.33■□□□□ 0.84
SCP2-201ENST00000371509 CHRNA5P30532 468 aa20.32■□□□□ 0.84
SCP2-201ENST00000371509 KLHL34Q8N239 644 aa20.32■□□□□ 0.84
SCP2-201ENST00000371509 SPON1Q9HCB6 807 aa20.32■□□□□ 0.84
SCP2-201ENST00000371509 PPP1R1BQ9UD71 204 aaPredicted RBP20.32■□□□□ 0.84
SCP2-201ENST00000371509 CDC45O75419 566 aa20.31■□□□□ 0.84
SCP2-201ENST00000371509 SRGNP10124 158 aa20.31■□□□□ 0.84
SCP2-201ENST00000371509 OS9Q13438 667 aaPredicted RBP20.31■□□□□ 0.84
SCP2-201ENST00000371509 TBC1D9Q6ZT07 1266 aa20.31■□□□□ 0.84
SCP2-201ENST00000371509 C2CD5Q86YS7 1000 aa20.31■□□□□ 0.84
SCP2-201ENST00000371509 KIF13BQ9NQT8 1826 aa20.31■□□□□ 0.84
SCP2-201ENST00000371509 CACNA1SQ13698 1873 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms