RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 LMOD1P29536 600 aaPredicted RBP8.63□□□□□ -1.03
USP1-202ENST00000371146 GYG1P46976 350 aa8.63□□□□□ -1.03
USP1-202ENST00000371146 NKX1-1Q15270 411 aaPredicted RBP8.63□□□□□ -1.03
USP1-202ENST00000371146 C3orf67Q6ZVT6 689 aa8.63□□□□□ -1.03
USP1-202ENST00000371146 NIM1KQ8IY84 436 aa8.63□□□□□ -1.03
USP1-202ENST00000371146 LINS1Q8NG48 757 aa8.63□□□□□ -1.03
USP1-202ENST00000371146 CNKSR1Q969H4 720 aa8.63□□□□□ -1.03
USP1-202ENST00000371146 ZFP91Q96JP5 570 aaPredicted RBP8.63□□□□□ -1.03
USP1-202ENST00000371146 METTL22Q9BUU2 404 aaPredicted RBP8.63□□□□□ -1.03
USP1-202ENST00000371146 DDNO94850 711 aaPredicted RBP8.63□□□□□ -1.03
USP1-202ENST00000371146 TBC1D10BQ4KMP7 808 aaPredicted RBP8.63□□□□□ -1.03
USP1-202ENST00000371146 OGFOD1Q8N543 542 aa8.63□□□□□ -1.03
USP1-202ENST00000371146 MXD3Q9BW11 206 aa8.63□□□□□ -1.03
USP1-202ENST00000371146 TAOK3Q9H2K8 898 aa8.63□□□□□ -1.03
USP1-202ENST00000371146 USP32Q8NFA0 1604 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 PCNTO95613 3336 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 HMMRO75330 724 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 CAMTA2O94983 1202 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 HTRA3P83110 453 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 PICALMQ13492 652 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 AACSQ86V21 672 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 SUCLG2Q96I99 432 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 PRDM4Q9UKN5 801 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 ZBED9Q6R2W3 1325 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 GNAI3P08754 354 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 TCP10Q12799 353 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 GCKRQ14397 625 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 BOLA2Q9H3K6 86 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 CLRN2A0PK11 232 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 HMGB2P26583 209 aaKnown RBP8.62□□□□□ -1.03
USP1-202ENST00000371146 LRRC24Q50LG9 513 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 SLC16A10Q8TF71 515 aa8.62□□□□□ -1.03
USP1-202ENST00000371146 CHMP4BQ9H444 224 aaKnown RBP8.62□□□□□ -1.03
USP1-202ENST00000371146 BCL9O00512 1426 aa8.61□□□□□ -1.03
USP1-202ENST00000371146 RNF123Q5XPI4 1314 aa8.61□□□□□ -1.03
USP1-202ENST00000371146 NEURL1BA8MQ27 555 aa8.61□□□□□ -1.03
USP1-202ENST00000371146 PPEF1O14829 653 aaPredicted RBP8.61□□□□□ -1.03
USP1-202ENST00000371146 MS4A1P11836 297 aa8.61□□□□□ -1.03
USP1-202ENST00000371146 ALDH1B1P30837 517 aa8.61□□□□□ -1.03
USP1-202ENST00000371146 PARP10Q53GL7 1025 aa8.61□□□□□ -1.03
USP1-202ENST00000371146 CAVIN4Q5BKX8 364 aa8.61□□□□□ -1.03
USP1-202ENST00000371146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.61□□□□□ -1.03
USP1-202ENST00000371146 TRIM34Q9BYJ4 488 aa8.61□□□□□ -1.03
USP1-202ENST00000371146 MYCNP04198 464 aaPredicted RBP8.61□□□□□ -1.03
USP1-202ENST00000371146 HSP90AA2PQ14568 343 aaPredicted RBP8.61□□□□□ -1.03
USP1-202ENST00000371146 TTC39AQ5SRH9 613 aa8.61□□□□□ -1.03
USP1-202ENST00000371146 TBC1D9Q6ZT07 1266 aa8.61□□□□□ -1.03
USP1-202ENST00000371146 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
USP1-202ENST00000371146 GGA1Q9UJY5 639 aa8.61□□□□□ -1.03
USP1-202ENST00000371146 PDE8AO60658 829 aa8.6□□□□□ -1.03
USP1-202ENST00000371146 CCT4P50991 539 aaKnown RBP8.6□□□□□ -1.03
USP1-202ENST00000371146 RRAGCQ9HB90 399 aa8.6□□□□□ -1.03
USP1-202ENST00000371146 ABT1Q9ULW3 272 aaKnown RBP8.6□□□□□ -1.03
USP1-202ENST00000371146 SOS1Q07889 1333 aaPredicted RBP8.6□□□□□ -1.03
USP1-202ENST00000371146 ITSN1Q15811 1721 aa8.6□□□□□ -1.03
USP1-202ENST00000371146 KIF24Q5T7B8 1368 aa8.6□□□□□ -1.03
USP1-202ENST00000371146 IFIT1P09914 478 aaKnown RBP8.6□□□□□ -1.03
USP1-202ENST00000371146 CACNB3P54284 484 aa8.6□□□□□ -1.03
USP1-202ENST00000371146 EPHA10Q5JZY3 1008 aa8.6□□□□□ -1.03
USP1-202ENST00000371146 NOL8Q76FK4 1167 aaKnown RBP8.6□□□□□ -1.03
USP1-202ENST00000371146 SETD1AO15047 1707 aaKnown RBP8.6□□□□□ -1.03
USP1-202ENST00000371146 NPC1L1Q9UHC9 1359 aa8.6□□□□□ -1.03
USP1-202ENST00000371146 AHDC1Q5TGY3 1603 aaPredicted RBP8.6□□□□□ -1.03
USP1-202ENST00000371146 IFT172Q9UG01 1749 aa8.6□□□□□ -1.03
USP1-202ENST00000371146 CLASRPQ8N2M8 674 aaKnown RBP8.6□□□□□ -1.03
USP1-202ENST00000371146 MASTLQ96GX5 879 aa8.6□□□□□ -1.03
USP1-202ENST00000371146 NOL10Q9BSC4 688 aaKnown RBP8.6□□□□□ -1.03
USP1-202ENST00000371146 RRP1P56182 461 aaKnown RBP8.59□□□□□ -1.03
USP1-202ENST00000371146 AKT1S1Q96B36 256 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 IGKV5-2P06315 115 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 WDR78Q5VTH9 848 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 FAM43AQ8N2R8 423 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 CCDC191Q8NCU4 936 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 DDX19BQ9UMR2 479 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 HDAC5Q9UQL6 1122 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 PIK3C2AO00443 1686 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 CEP290O15078 2479 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 CAPN15O75808 1086 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 BRIP1Q9BX63 1249 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 BCL2L12Q9HB09 334 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 NMRK2Q9NPI5 230 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 UBN2Q6ZU65 1347 aa8.59□□□□□ -1.03
USP1-202ENST00000371146 POLRMTO00411 1230 aaKnown RBP8.58□□□□□ -1.04
USP1-202ENST00000371146 ADRA2BP18089 450 aa8.58□□□□□ -1.04
USP1-202ENST00000371146 BCAMP50895 628 aa8.58□□□□□ -1.04
USP1-202ENST00000371146 CCDC93Q567U6 631 aa8.58□□□□□ -1.04
USP1-202ENST00000371146 RRP12Q5JTH9 1297 aaKnown RBP8.58□□□□□ -1.04
USP1-202ENST00000371146 TTLL5Q6EMB2 1281 aa8.58□□□□□ -1.04
USP1-202ENST00000371146 DLK2Q6UY11 383 aa8.58□□□□□ -1.04
USP1-202ENST00000371146 DZIP1Q86YF9 867 aaKnown RBP8.58□□□□□ -1.04
USP1-202ENST00000371146 GRIN3BO60391 1043 aa8.58□□□□□ -1.04
USP1-202ENST00000371146 HMGB1P09429 215 aaKnown RBP8.58□□□□□ -1.04
USP1-202ENST00000371146 MAP1SQ66K74 1059 aaPredicted RBP8.58□□□□□ -1.04
USP1-202ENST00000371146 XIRP1Q702N8 1843 aaKnown RBP8.58□□□□□ -1.04
USP1-202ENST00000371146 KIF1AQ12756 1690 aa8.58□□□□□ -1.04
USP1-202ENST00000371146 KDRP35968 1356 aa8.58□□□□□ -1.04
USP1-202ENST00000371146 NPR1P16066 1061 aa8.58□□□□□ -1.04
USP1-202ENST00000371146 CTSWP56202 376 aa8.58□□□□□ -1.04
USP1-202ENST00000371146 SAMD7Q7Z3H4 446 aa8.58□□□□□ -1.04
USP1-202ENST00000371146 MIGA1Q8NAN2 632 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms