RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 UQCRFS1P1P0C7P4 283 aa25.4■■□□□ 1.66
TM9SF3-201ENST00000371142 SDSP20132 328 aa25.4■■□□□ 1.66
TM9SF3-201ENST00000371142 RRAGBQ5VZM2 374 aa25.4■■□□□ 1.66
TM9SF3-201ENST00000371142 TSPY3P0CV98 308 aa25.39■■□□□ 1.66
TM9SF3-201ENST00000371142 TSPY8P0CW00 308 aa25.39■■□□□ 1.66
TM9SF3-201ENST00000371142 MEIS3Q99687 375 aa25.39■■□□□ 1.66
TM9SF3-201ENST00000371142 ZSCAN22P10073 491 aaPredicted RBP25.39■■□□□ 1.66
TM9SF3-201ENST00000371142 HCLS1P14317 486 aaPredicted RBP25.39■■□□□ 1.66
TM9SF3-201ENST00000371142 CCDC152Q4G0S7 254 aa25.39■■□□□ 1.66
TM9SF3-201ENST00000371142 CEP135Q66GS9 1140 aa25.39■■□□□ 1.66
TM9SF3-201ENST00000371142 GIMAP7Q8NHV1 300 aa25.39■■□□□ 1.66
TM9SF3-201ENST00000371142 TBCAO75347 108 aaKnown RBP25.39■■□□□ 1.66
TM9SF3-201ENST00000371142 TBC1D32Q96NH3 1257 aa25.39■■□□□ 1.66
TM9SF3-201ENST00000371142 POTEB2H3BUK9 544 aa25.39■■□□□ 1.65
TM9SF3-201ENST00000371142 NCOA1Q15788 1441 aa25.39■■□□□ 1.65
TM9SF3-201ENST00000371142 GNG11P61952 73 aa25.39■■□□□ 1.65
TM9SF3-201ENST00000371142 NUCB1Q02818 461 aa25.39■■□□□ 1.65
TM9SF3-201ENST00000371142 NBPF6Q5VWK0 638 aa25.39■■□□□ 1.65
TM9SF3-201ENST00000371142 NBPF5PQ86XG9 351 aaPredicted RBP25.39■■□□□ 1.65
TM9SF3-201ENST00000371142 NBPF4Q96M43 638 aa25.39■■□□□ 1.65
TM9SF3-201ENST00000371142 TRERF1Q96PN7 1200 aa25.39■■□□□ 1.65
TM9SF3-201ENST00000371142 COMMD10Q9Y6G5 202 aa25.39■■□□□ 1.65
TM9SF3-201ENST00000371142 TTC21AQ8NDW8 1320 aa25.39■■□□□ 1.65
TM9SF3-201ENST00000371142 ZSCAN16Q9H4T2 348 aaPredicted RBP25.38■■□□□ 1.65
TM9SF3-201ENST00000371142 CNPY2Q9Y2B0 182 aa25.38■■□□□ 1.65
TM9SF3-201ENST00000371142 SLC4A4Q9Y6R1 1079 aa25.38■■□□□ 1.65
TM9SF3-201ENST00000371142 CYP7A1P22680 504 aa25.38■■□□□ 1.65
TM9SF3-201ENST00000371142 NF2P35240 595 aa25.38■■□□□ 1.65
TM9SF3-201ENST00000371142 IFIT1BQ5T764 474 aaKnown RBP25.38■■□□□ 1.65
TM9SF3-201ENST00000371142 ALG1Q9BT22 464 aa25.38■■□□□ 1.65
TM9SF3-201ENST00000371142 PSMD1Q99460 953 aa25.37■■□□□ 1.65
TM9SF3-201ENST00000371142 ZBTB43O43298 467 aa25.37■■□□□ 1.65
TM9SF3-201ENST00000371142 SPDYE4A6NLX3 237 aa25.37■■□□□ 1.65
TM9SF3-201ENST00000371142 CCDC175P0C221 793 aa25.37■■□□□ 1.65
TM9SF3-201ENST00000371142 ST5P78524 1137 aa25.37■■□□□ 1.65
TM9SF3-201ENST00000371142 TMEM87AQ8NBN3 555 aa25.37■■□□□ 1.65
TM9SF3-201ENST00000371142 F8W031 263 aaPredicted RBP25.36■■□□□ 1.65
TM9SF3-201ENST00000371142 GSTO1P78417 241 aa25.36■■□□□ 1.65
TM9SF3-201ENST00000371142 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.36■■□□□ 1.65
TM9SF3-201ENST00000371142 GOLGA6L9A6NEM1 432 aa25.36■■□□□ 1.65
TM9SF3-201ENST00000371142 GTF2F1P35269 517 aaKnown RBP eCLIP25.36■■□□□ 1.65
TM9SF3-201ENST00000371142 HEATR3Q7Z4Q2 680 aa25.36■■□□□ 1.65
TM9SF3-201ENST00000371142 XAGE3Q8WTP9 111 aa25.36■■□□□ 1.65
TM9SF3-201ENST00000371142 MICALCLQ6ZW33 695 aa25.36■■□□□ 1.65
TM9SF3-201ENST00000371142 KRT23Q9C075 422 aa25.36■■□□□ 1.65
TM9SF3-201ENST00000371142 STAT6P42226 847 aa25.35■■□□□ 1.65
TM9SF3-201ENST00000371142 UBASH3AP57075 661 aa25.35■■□□□ 1.65
TM9SF3-201ENST00000371142 LRRC27Q9C0I9 530 aa25.35■■□□□ 1.65
TM9SF3-201ENST00000371142 PPP4R3BQ5MIZ7 849 aa25.35■■□□□ 1.65
TM9SF3-201ENST00000371142 CCDC174Q6PII3 467 aa25.35■■□□□ 1.65
TM9SF3-201ENST00000371142 RMND1Q9NWS8 449 aa25.35■■□□□ 1.65
TM9SF3-201ENST00000371142 ZNF830Q96NB3 372 aaPredicted RBP25.35■■□□□ 1.65
TM9SF3-201ENST00000371142 RBM8AQ9Y5S9 174 aaKnown RBP25.35■■□□□ 1.65
TM9SF3-201ENST00000371142 RBM25P49756 843 aaKnown RBP25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 ANO6Q4KMQ2 910 aa25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 C14orf93Q9H972 538 aaKnown RBP25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 RNF216Q9NWF9 866 aaPredicted RBP25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 IL16Q14005 1332 aa25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 SLC39A6Q13433 755 aa25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 Q6ZUG5 572 aa25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 TICAM2Q86XR7 235 aa25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 AKR1B10O60218 316 aa25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 RTN1Q16799 776 aa25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 UVSSAQ2YD98 709 aa25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 ACSBG1Q96GR2 724 aa25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 HOMER2Q9NSB8 354 aa25.34■■□□□ 1.65
TM9SF3-201ENST00000371142 ANKRD36BQ8N2N9 1353 aa25.33■■□□□ 1.65
TM9SF3-201ENST00000371142 NBPF7P0C2Y1 421 aaPredicted RBP25.33■■□□□ 1.65
TM9SF3-201ENST00000371142 DRC1Q96MC2 740 aa25.33■■□□□ 1.65
TM9SF3-201ENST00000371142 DHX29Q7Z478 1369 aaKnown RBP25.33■■□□□ 1.65
TM9SF3-201ENST00000371142 FSD2A1L4K1 749 aa25.33■■□□□ 1.65
TM9SF3-201ENST00000371142 KLHL40Q2TBA0 621 aa25.33■■□□□ 1.65
TM9SF3-201ENST00000371142 COPS6Q7L5N1 327 aa25.33■■□□□ 1.65
TM9SF3-201ENST00000371142 PICALMQ13492 652 aa25.32■■□□□ 1.64
TM9SF3-201ENST00000371142 ATP2B3Q16720 1220 aa25.32■■□□□ 1.64
TM9SF3-201ENST00000371142 MARCKSP29966 332 aaPredicted RBP25.32■■□□□ 1.64
TM9SF3-201ENST00000371142 LRSAM1Q6UWE0 723 aa25.32■■□□□ 1.64
TM9SF3-201ENST00000371142 FAM107BQ9H098 131 aa25.31■■□□□ 1.64
TM9SF3-201ENST00000371142 ERMNQ8TAM6 284 aa25.31■■□□□ 1.64
TM9SF3-201ENST00000371142 LMAN1P49257 510 aa25.31■■□□□ 1.64
TM9SF3-201ENST00000371142 USP48Q86UV5 1035 aa25.31■■□□□ 1.64
TM9SF3-201ENST00000371142 ESR2Q92731 530 aa25.31■■□□□ 1.64
TM9SF3-201ENST00000371142 PDE1AP54750 535 aa25.31■■□□□ 1.64
TM9SF3-201ENST00000371142 MCMDC2Q4G0Z9 681 aa25.31■■□□□ 1.64
TM9SF3-201ENST00000371142 TBC1D5Q92609 795 aa25.31■■□□□ 1.64
TM9SF3-201ENST00000371142 ESYT1Q9BSJ8 1104 aa25.3■■□□□ 1.64
TM9SF3-201ENST00000371142 ATP6V1AP38606 617 aa25.3■■□□□ 1.64
TM9SF3-201ENST00000371142 HDAC1Q13547 482 aaPredicted RBP25.29■■□□□ 1.64
TM9SF3-201ENST00000371142 CEP63Q96MT8 703 aa25.29■■□□□ 1.64
TM9SF3-201ENST00000371142 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.29■■□□□ 1.64
TM9SF3-201ENST00000371142 ZFYP08048 801 aaPredicted RBP25.29■■□□□ 1.64
TM9SF3-201ENST00000371142 RGS22Q8NE09 1264 aa25.29■■□□□ 1.64
TM9SF3-201ENST00000371142 IFI16Q16666 785 aaKnown RBP25.29■■□□□ 1.64
TM9SF3-201ENST00000371142 KIAA0753Q2KHM9 967 aa25.29■■□□□ 1.64
TM9SF3-201ENST00000371142 LMBR1LQ6UX01 489 aa25.29■■□□□ 1.64
TM9SF3-201ENST00000371142 SPAG5Q96R06 1193 aa25.29■■□□□ 1.64
TM9SF3-201ENST00000371142 C16orf71Q8IYS4 520 aaPredicted RBP25.29■■□□□ 1.64
TM9SF3-201ENST00000371142 KCNG4Q8TDN1 519 aa25.29■■□□□ 1.64
TM9SF3-201ENST00000371142 SYNCQ9H7C4 482 aa25.28■■□□□ 1.64
TM9SF3-201ENST00000371142 CNNM2Q9H8M5 875 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms