RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 RALGAPBQ86X10 1494 aa14.53□□□□□ -0.08
GPC4-201ENST00000370828 BRD1O95696 1058 aa14.53□□□□□ -0.08
GPC4-201ENST00000370828 CCDC43Q96MW1 224 aaKnown RBP14.53□□□□□ -0.08
GPC4-201ENST00000370828 G3V3G9 751 aa14.52□□□□□ -0.08
GPC4-201ENST00000370828 DCAF8Q5TAQ9 597 aa14.52□□□□□ -0.08
GPC4-201ENST00000370828 SPECC1LQ69YQ0 1117 aa14.52□□□□□ -0.08
GPC4-201ENST00000370828 CEP85Q6P2H3 762 aa14.52□□□□□ -0.08
GPC4-201ENST00000370828 CCDC144CPQ8IYA2 1237 aa14.52□□□□□ -0.08
GPC4-201ENST00000370828 CNNM1Q9NRU3 951 aa14.52□□□□□ -0.08
GPC4-201ENST00000370828 TCEAL9Q9UHQ7 104 aa14.52□□□□□ -0.08
GPC4-201ENST00000370828 WDHD1O75717 1129 aaPredicted RBP14.52□□□□□ -0.08
GPC4-201ENST00000370828 HMGB1P1B2RPK0 211 aaPredicted RBP14.52□□□□□ -0.09
GPC4-201ENST00000370828 IDH1O75874 414 aaKnown RBP14.52□□□□□ -0.09
GPC4-201ENST00000370828 INPP5BP32019 993 aa14.52□□□□□ -0.09
GPC4-201ENST00000370828 KCNG4Q8TDN1 519 aa14.52□□□□□ -0.09
GPC4-201ENST00000370828 ADGRF5Q8IZF2 1346 aa14.52□□□□□ -0.09
GPC4-201ENST00000370828 ZBTB7BO15156 539 aaPredicted RBP14.52□□□□□ -0.09
GPC4-201ENST00000370828 HAND2P61296 217 aa14.52□□□□□ -0.09
GPC4-201ENST00000370828 TESK2Q96S53 571 aa14.52□□□□□ -0.09
GPC4-201ENST00000370828 GUCA1BQ9UMX6 200 aa14.52□□□□□ -0.09
GPC4-201ENST00000370828 ABTB2Q8N961 1025 aa14.51□□□□□ -0.09
GPC4-201ENST00000370828 CCDC85AQ96PX6 553 aaPredicted RBP14.51□□□□□ -0.09
GPC4-201ENST00000370828 NEBLO76041 1014 aa14.51□□□□□ -0.09
GPC4-201ENST00000370828 ANKRD18AQ8IVF6 992 aa14.51□□□□□ -0.09
GPC4-201ENST00000370828 BAG1Q99933 345 aaPredicted RBP14.51□□□□□ -0.09
GPC4-201ENST00000370828 CD2BP2O95400 341 aaKnown RBP14.51□□□□□ -0.09
GPC4-201ENST00000370828 MTIF2P46199 727 aaKnown RBP14.51□□□□□ -0.09
GPC4-201ENST00000370828 HMG20BQ9P0W2 317 aa14.51□□□□□ -0.09
GPC4-201ENST00000370828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.51□□□□□ -0.09
GPC4-201ENST00000370828 CHMP4BP1P59074 171 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 Q6ZUG5 572 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 BTBD11A6QL63 1104 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 CCDC57Q2TAC2 916 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 NME9Q86XW9 330 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 EHBP1Q8NDI1 1231 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.5□□□□□ -0.09
GPC4-201ENST00000370828 ASXL1Q8IXJ9 1541 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 A0A1B0GVL5 298 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 GNAT3A8MTJ3 354 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 VAMP4O75379 141 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 AFMP43652 599 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 NDUFAB1O14561 156 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 ATP2B3Q16720 1220 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 SAMD1Q6SPF0 538 aaPredicted RBP14.5□□□□□ -0.09
GPC4-201ENST00000370828 JARID2Q92833 1246 aaPredicted RBP14.5□□□□□ -0.09
GPC4-201ENST00000370828 CLSTN2Q9H4D0 955 aa14.5□□□□□ -0.09
GPC4-201ENST00000370828 MYO1BO43795 1136 aa14.49□□□□□ -0.09
GPC4-201ENST00000370828 UBE4AQ14139 1066 aa14.49□□□□□ -0.09
GPC4-201ENST00000370828 CCDC141Q6ZP82 1450 aa14.49□□□□□ -0.09
GPC4-201ENST00000370828 HECW1Q76N89 1606 aa14.49□□□□□ -0.09
GPC4-201ENST00000370828 SPTLC2O15270 562 aa14.49□□□□□ -0.09
GPC4-201ENST00000370828 AKR1B10O60218 316 aa14.49□□□□□ -0.09
GPC4-201ENST00000370828 DBN1Q16643 649 aa14.49□□□□□ -0.09
GPC4-201ENST00000370828 SCAF11Q99590 1463 aaKnown RBP14.49□□□□□ -0.09
GPC4-201ENST00000370828 IFIT1P09914 478 aaKnown RBP14.49□□□□□ -0.09
GPC4-201ENST00000370828 CCDC96Q2M329 555 aa14.49□□□□□ -0.09
GPC4-201ENST00000370828 ZMYM4Q5VZL5 1548 aa14.49□□□□□ -0.09
GPC4-201ENST00000370828 GOLGA8AA7E2F4 631 aa14.49□□□□□ -0.09
GPC4-201ENST00000370828 SEPT6Q14141 434 aa14.49□□□□□ -0.09
GPC4-201ENST00000370828 LARP1Q6PKG0 1096 aaKnown RBP14.49□□□□□ -0.09
GPC4-201ENST00000370828 GIGYF2Q6Y7W6 1299 aaKnown RBP14.49□□□□□ -0.09
GPC4-201ENST00000370828 MICU3Q86XE3 530 aa14.49□□□□□ -0.09
GPC4-201ENST00000370828 RSRC1Q96IZ7 334 aaKnown RBP14.49□□□□□ -0.09
GPC4-201ENST00000370828 NUCKS1Q9H1E3 243 aaKnown RBP14.49□□□□□ -0.09
GPC4-201ENST00000370828 CLNS1AP54105 237 aaKnown RBP14.48□□□□□ -0.09
GPC4-201ENST00000370828 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
GPC4-201ENST00000370828 TRIM21P19474 475 aaKnown RBP14.48□□□□□ -0.09
GPC4-201ENST00000370828 PIK3R5Q8WYR1 880 aa14.48□□□□□ -0.09
GPC4-201ENST00000370828 GCOM1H8Y6P7 765 aaPredicted RBP14.48□□□□□ -0.09
GPC4-201ENST00000370828 ZNF213O14771 459 aa14.48□□□□□ -0.09
GPC4-201ENST00000370828 MYZAPP0CAP1 466 aa14.48□□□□□ -0.09
GPC4-201ENST00000370828 IARSP41252 1262 aaKnown RBP14.48□□□□□ -0.09
GPC4-201ENST00000370828 STX17P56962 302 aa14.48□□□□□ -0.09
GPC4-201ENST00000370828 SPATS2LQ9NUQ6 558 aaKnown RBP14.47□□□□□ -0.09
GPC4-201ENST00000370828 RTEL1-TNFRSF6BF6WH68 1400 aa14.47□□□□□ -0.09
GPC4-201ENST00000370828 CTCFLQ8NI51 663 aaPredicted RBP14.47□□□□□ -0.09
GPC4-201ENST00000370828 PAF1Q8N7H5 531 aa14.47□□□□□ -0.09
GPC4-201ENST00000370828 AIDAQ96BJ3 306 aa14.47□□□□□ -0.09
GPC4-201ENST00000370828 CAMSAP2Q08AD1 1489 aa14.47□□□□□ -0.09
GPC4-201ENST00000370828 POLR3AO14802 1390 aaPredicted RBP14.47□□□□□ -0.09
GPC4-201ENST00000370828 TUBB4BP68371 445 aa14.47□□□□□ -0.09
GPC4-201ENST00000370828 SSRP1Q08945 709 aaKnown RBP14.47□□□□□ -0.09
GPC4-201ENST00000370828 RPUSD2Q8IZ73 545 aaKnown RBP14.47□□□□□ -0.09
GPC4-201ENST00000370828 CEP120Q8N960 986 aa14.47□□□□□ -0.09
GPC4-201ENST00000370828 KLF18A0A0U1RQI7 1052 aa14.46□□□□□ -0.09
GPC4-201ENST00000370828 TUBBP07437 444 aa14.46□□□□□ -0.09
GPC4-201ENST00000370828 PPARDQ03181 441 aa14.46□□□□□ -0.09
GPC4-201ENST00000370828 PRPF4BQ13523 1007 aaKnown RBP14.46□□□□□ -0.09
GPC4-201ENST00000370828 PPP2R5AQ15172 486 aa14.46□□□□□ -0.09
GPC4-201ENST00000370828 FAM114A1Q8IWE2 563 aa14.46□□□□□ -0.09
GPC4-201ENST00000370828 SLC12A7Q9Y666 1083 aa14.46□□□□□ -0.09
GPC4-201ENST00000370828 CYLC1P35663 651 aaPredicted RBP14.46□□□□□ -0.09
GPC4-201ENST00000370828 NOP2P46087 812 aaKnown RBP14.46□□□□□ -0.09
GPC4-201ENST00000370828 ATP8B2P98198 1209 aa14.46□□□□□ -0.09
GPC4-201ENST00000370828 CPLX4Q7Z7G2 160 aa14.46□□□□□ -0.09
GPC4-201ENST00000370828 BMP2KQ9NSY1 1161 aaPredicted RBP14.46□□□□□ -0.09
GPC4-201ENST00000370828 NRBP1Q9UHY1 535 aa14.46□□□□□ -0.09
GPC4-201ENST00000370828 GSTTP1A0A1W2PQM5 241 aa14.46□□□□□ -0.09
GPC4-201ENST00000370828 CREB3L3Q68CJ9 461 aa14.46□□□□□ -0.09
GPC4-201ENST00000370828 KRT24Q2M2I5 525 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms