RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 PROCA1Q8NCQ7 364 aaPredicted RBP11.26□□□□□ -0.61
COL21A1-202ENST00000370817 NGLY1Q96IV0 654 aa11.26□□□□□ -0.61
COL21A1-202ENST00000370817 PARP4Q9UKK3 1724 aaKnown RBP11.26□□□□□ -0.61
COL21A1-202ENST00000370817 FSHRP23945 695 aa11.25□□□□□ -0.61
COL21A1-202ENST00000370817 ILDR2Q71H61 639 aa11.25□□□□□ -0.61
COL21A1-202ENST00000370817 UNC5CLQ8IV45 518 aa11.25□□□□□ -0.61
COL21A1-202ENST00000370817 KCNH5Q8NCM2 988 aa11.25□□□□□ -0.61
COL21A1-202ENST00000370817 SLC16A10Q8TF71 515 aa11.25□□□□□ -0.61
COL21A1-202ENST00000370817 LRRN4Q8WUT4 740 aa11.25□□□□□ -0.61
COL21A1-202ENST00000370817 USP21Q9UK80 565 aa11.25□□□□□ -0.61
COL21A1-202ENST00000370817 MAP4K5Q9Y4K4 846 aa11.25□□□□□ -0.61
COL21A1-202ENST00000370817 ZC3H6P61129 1189 aaKnown RBP11.24□□□□□ -0.61
COL21A1-202ENST00000370817 INSM1Q01101 510 aaPredicted RBP11.24□□□□□ -0.61
COL21A1-202ENST00000370817 NPAS3Q8IXF0 933 aa11.24□□□□□ -0.61
COL21A1-202ENST00000370817 GPKOWQ92917 476 aaPredicted RBP eCLIP11.24□□□□□ -0.61
COL21A1-202ENST00000370817 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.24□□□□□ -0.61
COL21A1-202ENST00000370817 PANK3Q9H999 370 aa11.24□□□□□ -0.61
COL21A1-202ENST00000370817 PRDM11Q9NQV5 511 aa11.24□□□□□ -0.61
COL21A1-202ENST00000370817 NSD2O96028 1365 aa11.24□□□□□ -0.61
COL21A1-202ENST00000370817 RGS12O14924 1447 aa11.24□□□□□ -0.61
COL21A1-202ENST00000370817 SOBPA7XYQ1 873 aa11.23□□□□□ -0.61
COL21A1-202ENST00000370817 CHRNA2Q15822 529 aa11.23□□□□□ -0.61
COL21A1-202ENST00000370817 VPS72Q15906 364 aa11.23□□□□□ -0.61
COL21A1-202ENST00000370817 VASH1Q7L8A9 365 aaPredicted RBP11.23□□□□□ -0.61
COL21A1-202ENST00000370817 DDRGK1Q96HY6 314 aa11.23□□□□□ -0.61
COL21A1-202ENST00000370817 BTG4Q9NY30 223 aa11.23□□□□□ -0.61
COL21A1-202ENST00000370817 TRPC5Q9UL62 973 aaPredicted RBP11.23□□□□□ -0.61
COL21A1-202ENST00000370817 H3BM21 787 aa11.22□□□□□ -0.61
COL21A1-202ENST00000370817 CGNL1Q0VF96 1302 aa11.22□□□□□ -0.61
COL21A1-202ENST00000370817 ERFEQ4G0M1 354 aa11.22□□□□□ -0.61
COL21A1-202ENST00000370817 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
COL21A1-202ENST00000370817 POLR3GLQ9BT43 218 aa11.22□□□□□ -0.61
COL21A1-202ENST00000370817 GGNBP2Q9H3C7 697 aa11.22□□□□□ -0.61
COL21A1-202ENST00000370817 QTRT2Q9H974 415 aaKnown RBP11.22□□□□□ -0.61
COL21A1-202ENST00000370817 SHANK3Q9BYB0 1731 aa11.21□□□□□ -0.61
COL21A1-202ENST00000370817 LRRC37A3O60309 1634 aa11.21□□□□□ -0.61
COL21A1-202ENST00000370817 BLMP54132 1417 aaPredicted RBP11.21□□□□□ -0.61
COL21A1-202ENST00000370817 RTL1A6NKG5 1358 aa11.21□□□□□ -0.61
COL21A1-202ENST00000370817 NPC1L1Q9UHC9 1359 aa11.21□□□□□ -0.61
COL21A1-202ENST00000370817 C6orf118Q5T5N4 469 aa11.21□□□□□ -0.61
COL21A1-202ENST00000370817 PPP2R2DQ66LE6 453 aa11.21□□□□□ -0.61
COL21A1-202ENST00000370817 MEIOBQ8N635 442 aa11.21□□□□□ -0.61
COL21A1-202ENST00000370817 COG3Q96JB2 828 aa11.21□□□□□ -0.61
COL21A1-202ENST00000370817 KIF24Q5T7B8 1368 aa11.2□□□□□ -0.62
COL21A1-202ENST00000370817 SPATA31A5Q5VU36 1347 aa11.2□□□□□ -0.62
COL21A1-202ENST00000370817 SPATA31A7Q8IWB4 1347 aa11.2□□□□□ -0.62
COL21A1-202ENST00000370817 BRPF1P55201 1214 aaPredicted RBP11.2□□□□□ -0.62
COL21A1-202ENST00000370817 RBM6P78332 1123 aaKnown RBP11.2□□□□□ -0.62
COL21A1-202ENST00000370817 NR6A1Q15406 480 aa11.2□□□□□ -0.62
COL21A1-202ENST00000370817 GJD4Q96KN9 370 aaPredicted RBP11.2□□□□□ -0.62
COL21A1-202ENST00000370817 STK17AQ9UEE5 414 aa11.2□□□□□ -0.62
COL21A1-202ENST00000370817 FKBPLQ9UIM3 349 aa11.2□□□□□ -0.62
COL21A1-202ENST00000370817 RGPD1P0DJD0 1748 aa11.2□□□□□ -0.62
COL21A1-202ENST00000370817 CRB1P82279 1406 aa11.19□□□□□ -0.62
COL21A1-202ENST00000370817 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
COL21A1-202ENST00000370817 ERBB4Q15303 1308 aa11.19□□□□□ -0.62
COL21A1-202ENST00000370817 MAP3K19Q56UN5 1328 aa11.19□□□□□ -0.62
COL21A1-202ENST00000370817 GMPRP36959 345 aa11.19□□□□□ -0.62
COL21A1-202ENST00000370817 PDXDC2PQ6P474 469 aa11.19□□□□□ -0.62
COL21A1-202ENST00000370817 IRF7Q92985 503 aa11.19□□□□□ -0.62
COL21A1-202ENST00000370817 SPATA31A1Q5TZJ5 1347 aa11.18□□□□□ -0.62
COL21A1-202ENST00000370817 FBLN1P23142 703 aa11.18□□□□□ -0.62
COL21A1-202ENST00000370817 RXRBP28702 533 aa11.18□□□□□ -0.62
COL21A1-202ENST00000370817 LINC00528Q8N1L1 170 aa11.18□□□□□ -0.62
COL21A1-202ENST00000370817 DISP2A7MBM2 1401 aa11.18□□□□□ -0.62
COL21A1-202ENST00000370817 NCAPD2Q15021 1401 aa11.18□□□□□ -0.62
COL21A1-202ENST00000370817 WDR17Q8IZU2 1322 aa11.17□□□□□ -0.62
COL21A1-202ENST00000370817 LARP1Q6PKG0 1096 aaKnown RBP11.17□□□□□ -0.62
COL21A1-202ENST00000370817 CCDC116Q8IYX3 515 aa11.17□□□□□ -0.62
COL21A1-202ENST00000370817 IP6K1Q92551 441 aa11.17□□□□□ -0.62
COL21A1-202ENST00000370817 ARHGAP9Q9BRR9 750 aa11.17□□□□□ -0.62
COL21A1-202ENST00000370817 PKD1L3Q7Z443 1732 aa11.16□□□□□ -0.62
COL21A1-202ENST00000370817 BMP2P12643 396 aa11.16□□□□□ -0.62
COL21A1-202ENST00000370817 HOXC9P31274 260 aa11.16□□□□□ -0.62
COL21A1-202ENST00000370817 HOMEZQ8IX15 550 aa11.16□□□□□ -0.62
COL21A1-202ENST00000370817 EMILIN1Q9Y6C2 1016 aa11.16□□□□□ -0.62
COL21A1-202ENST00000370817 INSRP06213 1382 aa11.16□□□□□ -0.62
COL21A1-202ENST00000370817 FLT4P35916 1363 aa11.16□□□□□ -0.62
COL21A1-202ENST00000370817 TNS1Q9HBL0 1735 aaKnown RBP11.15□□□□□ -0.62
COL21A1-202ENST00000370817 MAN1A2O60476 641 aa11.15□□□□□ -0.62
COL21A1-202ENST00000370817 AP1G2O75843 785 aa11.15□□□□□ -0.62
COL21A1-202ENST00000370817 UPP2O95045 317 aa11.15□□□□□ -0.62
COL21A1-202ENST00000370817 RRS1Q15050 365 aaKnown RBP11.15□□□□□ -0.62
COL21A1-202ENST00000370817 OCSTAMPQ9BR26 566 aa11.15□□□□□ -0.62
COL21A1-202ENST00000370817 KNSTRNQ9Y448 316 aa11.15□□□□□ -0.62
COL21A1-202ENST00000370817 ZC3H4Q9UPT8 1303 aaKnown RBP11.14□□□□□ -0.63
COL21A1-202ENST00000370817 STRN4Q9NRL3 753 aa11.14□□□□□ -0.63
COL21A1-202ENST00000370817 VIRMAQ69YN4 1812 aaKnown RBP11.14□□□□□ -0.63
COL21A1-202ENST00000370817 COL3A1P02461 1466 aaPredicted RBP11.13□□□□□ -0.63
COL21A1-202ENST00000370817 PPP1R26Q5T8A7 1209 aaPredicted RBP11.13□□□□□ -0.63
COL21A1-202ENST00000370817 EPS8L1Q8TE68 723 aa11.13□□□□□ -0.63
COL21A1-202ENST00000370817 SLC10A4Q96EP9 437 aa11.13□□□□□ -0.63
COL21A1-202ENST00000370817 CARD10Q9BWT7 1032 aa11.13□□□□□ -0.63
COL21A1-202ENST00000370817 POLKQ9UBT6 870 aa11.13□□□□□ -0.63
COL21A1-202ENST00000370817 THRAP3Q9Y2W1 955 aaKnown RBP11.13□□□□□ -0.63
COL21A1-202ENST00000370817 ZBTB7CA1YPR0 619 aa11.12□□□□□ -0.63
COL21A1-202ENST00000370817 ZBTB33Q86T24 672 aa11.12□□□□□ -0.63
COL21A1-202ENST00000370817 ANKRD24Q8TF21 1146 aa11.12□□□□□ -0.63
COL21A1-202ENST00000370817 HMX1Q9NP08 348 aaPredicted RBP11.12□□□□□ -0.63
COL21A1-202ENST00000370817 USP17L8P0C7I0 530 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms