RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 IBTKQ9P2D0 1353 aaPredicted RBP8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 MCMDC2Q4G0Z9 681 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 LRRC24Q50LG9 513 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 CCDC73Q6ZRK6 1079 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 AMOTL1Q8IY63 956 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 CHAMP1Q96JM3 812 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 C1orf167Q5SNV9 1468 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 GOLGA6L19H0YKK7 550 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 TAF5LO75529 589 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 MAP3K12Q12852 859 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 CREB3L3Q68CJ9 461 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 SEC62Q99442 399 aaKnown RBP8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 ZBTB1Q9Y2K1 713 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 ARHGEF28Q8N1W1 1705 aaKnown RBP8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 IQSEC2Q5JU85 1478 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 CRB1P82279 1406 aa8.43□□□□□ -1.06
TGFBR3-202ENST00000370399 IGKV5-2P06315 115 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 RFC4P35249 363 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 CAVIN4Q5BKX8 364 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 EPHA10Q5JZY3 1008 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 ZNF219Q9P2Y4 722 aaPredicted RBP8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 STX6O43752 255 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 ME1P48163 572 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 TCIRG1Q13488 830 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 CAMK4Q16566 473 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 PIGBQ92521 554 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 ARID3AQ99856 593 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 PUS3Q9BZE2 481 aaKnown RBP8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 PPP1R1BQ9UD71 204 aaPredicted RBP8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 KDRP35968 1356 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 MYO5BQ9ULV0 1848 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 SAFBQ15424 915 aaKnown RBP eCLIP8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 UTP14AQ9BVJ6 771 aaKnown RBP8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 ANAPC15P60006 121 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 SASS6Q6UVJ0 657 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 SPATA32Q96LK8 384 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 AK7Q96M32 723 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 CCDC171Q6TFL3 1326 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 NEURL4Q96JN8 1562 aa8.42□□□□□ -1.06
TGFBR3-202ENST00000370399 PTH1RQ03431 593 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 PKP1Q13835 747 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 CCDC152Q4G0S7 254 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 SETDB2Q96T68 719 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 GOLGA6L6A8MZA4 724 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 GNPATO15228 680 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 STK38Q15208 465 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 CDC5LQ99459 802 aaKnown RBP8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 SH2B1Q9NRF2 756 aaPredicted RBP8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 SNX14Q9Y5W7 946 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 CCDC69A6NI79 296 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 SYNE4Q8N205 404 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 DIP2AQ14689 1571 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 A0A0D9SFI3 127 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 Q6ZUG5 572 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 MICU3Q86XE3 530 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 MIGA1Q8NAN2 632 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 XAGE2Q96GT9 111 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 UBAC1Q9BSL1 405 aa8.41□□□□□ -1.06
TGFBR3-202ENST00000370399 SH3TC1Q8TE82 1336 aa8.4□□□□□ -1.06
TGFBR3-202ENST00000370399 SASH1O94885 1247 aa8.4□□□□□ -1.06
TGFBR3-202ENST00000370399 DBNLQ9UJU6 430 aaKnown RBP8.4□□□□□ -1.06
TGFBR3-202ENST00000370399 RANBP6O60518 1105 aaKnown RBP8.4□□□□□ -1.06
TGFBR3-202ENST00000370399 ATP2B2Q01814 1243 aa8.4□□□□□ -1.06
TGFBR3-202ENST00000370399 RAB3GAP1Q15042 981 aa8.4□□□□□ -1.06
TGFBR3-202ENST00000370399 ANKRD18AQ8IVF6 992 aa8.4□□□□□ -1.06
TGFBR3-202ENST00000370399 NLRP3Q96P20 1036 aa8.4□□□□□ -1.06
TGFBR3-202ENST00000370399 PANK2Q9BZ23 570 aa8.4□□□□□ -1.06
TGFBR3-202ENST00000370399 GOLGA8BA8MQT2 603 aa8.4□□□□□ -1.07
TGFBR3-202ENST00000370399 NRDCO43847 1150 aa8.4□□□□□ -1.07
TGFBR3-202ENST00000370399 MARCH6O60337 910 aa8.4□□□□□ -1.07
TGFBR3-202ENST00000370399 VPS53Q5VIR6 699 aa8.4□□□□□ -1.07
TGFBR3-202ENST00000370399 FAM173BQ6P4H8 233 aa8.4□□□□□ -1.07
TGFBR3-202ENST00000370399 RASEFQ8IZ41 740 aa8.4□□□□□ -1.07
TGFBR3-202ENST00000370399 SMARCC1Q92922 1105 aaPredicted RBP8.4□□□□□ -1.07
TGFBR3-202ENST00000370399 WWC3Q9ULE0 1092 aa8.4□□□□□ -1.07
TGFBR3-202ENST00000370399 MAP2P11137 1827 aaKnown RBP8.4□□□□□ -1.07
TGFBR3-202ENST00000370399 TSPY26PQ9H489 355 aa8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 C6orf229H3BNL8 230 aa8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 KINO60870 393 aaKnown RBP8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 CNPY2Q9Y2B0 182 aa8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 COL3A1P02461 1466 aaPredicted RBP8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 IFIT3O14879 490 aaKnown RBP8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 RXRAP19793 462 aa8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 CCDC87Q9NVE4 849 aa8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 RAD50Q92878 1312 aa8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 CEP170BQ9Y4F5 1589 aaPredicted RBP8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 ZAP70P43403 619 aa8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 MYOM1P52179 1685 aa8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 USP21Q9UK80 565 aa8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 RTCBQ9Y3I0 505 aaKnown RBP8.39□□□□□ -1.07
TGFBR3-202ENST00000370399 LOC102724428A0A0B4J2F2 783 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 PES1O00541 588 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 SIK1P57059 783 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 DNM1Q05193 864 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 APOBRQ0VD83 1088 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 SLFNL1Q499Z3 407 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 DZIP1Q86YF9 867 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 TNMDQ9H2S6 317 aa8.38□□□□□ -1.07
TGFBR3-202ENST00000370399 OSBPL3Q9H4L5 887 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms