RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 JARID2Q92833 1246 aaPredicted RBP17.33■□□□□ 0.36
SSR4-202ENST00000370085 PLA2G12BQ9BX93 195 aa17.33■□□□□ 0.36
SSR4-202ENST00000370085 BBOX1O75936 387 aa17.32■□□□□ 0.36
SSR4-202ENST00000370085 YBX3P16989 372 aaKnown RBP eCLIP17.32■□□□□ 0.364e-12■■■□□ 16.3
SSR4-202ENST00000370085 INTS3Q68E01 1043 aaKnown RBP17.32■□□□□ 0.36
SSR4-202ENST00000370085 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
SSR4-202ENST00000370085 GRAPQ13588 217 aa17.31■□□□□ 0.36
SSR4-202ENST00000370085 GRIPAP1Q4V328 841 aa17.31■□□□□ 0.36
SSR4-202ENST00000370085 CC2D2BQ6DHV5 1058 aa17.31■□□□□ 0.36
SSR4-202ENST00000370085 C3orf67Q6ZVT6 689 aa17.31■□□□□ 0.36
SSR4-202ENST00000370085 GRAPLQ8TC17 118 aaPredicted RBP17.31■□□□□ 0.36
SSR4-202ENST00000370085 CLUAP1Q96AJ1 413 aa17.31■□□□□ 0.36
SSR4-202ENST00000370085 UTYO14607 1347 aa17.3■□□□□ 0.36
SSR4-202ENST00000370085 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
SSR4-202ENST00000370085 GNAI3P08754 354 aa17.3■□□□□ 0.36
SSR4-202ENST00000370085 UBTFL1P0CB47 393 aaPredicted RBP17.3■□□□□ 0.36
SSR4-202ENST00000370085 ARHGAP27Q6ZUM4 889 aa17.3■□□□□ 0.36
SSR4-202ENST00000370085 CDC5LQ99459 802 aaKnown RBP17.3■□□□□ 0.36
SSR4-202ENST00000370085 SLX4Q8IY92 1834 aa17.29■□□□□ 0.36
SSR4-202ENST00000370085 C21orf2O43822 256 aa17.29■□□□□ 0.36
SSR4-202ENST00000370085 CASP7P55210 303 aa17.29■□□□□ 0.36
SSR4-202ENST00000370085 CCDC93Q567U6 631 aa17.29■□□□□ 0.36
SSR4-202ENST00000370085 TTLL11Q8NHH1 800 aa17.29■□□□□ 0.36
SSR4-202ENST00000370085 ANKRD18AQ8IVF6 992 aa17.28■□□□□ 0.36
SSR4-202ENST00000370085 RTKN2Q8IZC4 609 aa17.28■□□□□ 0.36
SSR4-202ENST00000370085 USP44Q9H0E7 712 aa17.28■□□□□ 0.36
SSR4-202ENST00000370085 CHMP4BQ9H444 224 aaKnown RBP17.28■□□□□ 0.36
SSR4-202ENST00000370085 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
SSR4-202ENST00000370085 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
SSR4-202ENST00000370085 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
SSR4-202ENST00000370085 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.36
SSR4-202ENST00000370085 RPS8P62241 208 aaKnown RBP17.27■□□□□ 0.36
SSR4-202ENST00000370085 ITPRIPQ8IWB1 547 aa17.27■□□□□ 0.36
SSR4-202ENST00000370085 CCDC85AQ96PX6 553 aaPredicted RBP17.27■□□□□ 0.36
SSR4-202ENST00000370085 CHD4Q14839 1912 aa17.26■□□□□ 0.35
SSR4-202ENST00000370085 ANKRD18BA2A2Z9 1011 aa17.26■□□□□ 0.35
SSR4-202ENST00000370085 CSF1RP07333 972 aa17.26■□□□□ 0.35
SSR4-202ENST00000370085 IGHMBP2P38935 993 aaKnown RBP17.26■□□□□ 0.35
SSR4-202ENST00000370085 IFIT5Q13325 482 aaKnown RBP17.26■□□□□ 0.35
SSR4-202ENST00000370085 CCDC57Q2TAC2 916 aa17.26■□□□□ 0.35
SSR4-202ENST00000370085 TAF7LQ5H9L4 462 aa17.26■□□□□ 0.35
SSR4-202ENST00000370085 TMEM57Q8N5G2 664 aa17.26■□□□□ 0.35
SSR4-202ENST00000370085 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
SSR4-202ENST00000370085 ITGA6P23229 1130 aa17.25■□□□□ 0.35
SSR4-202ENST00000370085 LMBR1LQ6UX01 489 aa17.25■□□□□ 0.35
SSR4-202ENST00000370085 SP8Q8IXZ3 490 aa17.25■□□□□ 0.35
SSR4-202ENST00000370085 SUCLG2Q96I99 432 aa17.25■□□□□ 0.35
SSR4-202ENST00000370085 GREM2Q9H772 168 aa17.25■□□□□ 0.35
SSR4-202ENST00000370085 FOXO4P98177 505 aa17.24■□□□□ 0.35
SSR4-202ENST00000370085 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
SSR4-202ENST00000370085 C7orf43Q8WVR3 580 aa17.24■□□□□ 0.35
SSR4-202ENST00000370085 MPHOSPH8Q99549 860 aa17.24■□□□□ 0.35
SSR4-202ENST00000370085 TAOK3Q9H2K8 898 aa17.24■□□□□ 0.35
SSR4-202ENST00000370085 BICC1Q9H694 974 aaKnown RBP17.24■□□□□ 0.35
SSR4-202ENST00000370085 UTRNP46939 3433 aa17.24■□□□□ 0.35
SSR4-202ENST00000370085 FAM161AQ3B820 660 aa17.23■□□□□ 0.35
SSR4-202ENST00000370085 CELF1Q92879 486 aaKnown RBP17.23■□□□□ 0.35
SSR4-202ENST00000370085 SEC31BQ9NQW1 1179 aa17.23■□□□□ 0.35
SSR4-202ENST00000370085 LTBP3Q9NS15 1303 aa17.22■□□□□ 0.35
SSR4-202ENST00000370085 GNAI2P04899 355 aa17.22■□□□□ 0.35
SSR4-202ENST00000370085 FKBP4Q02790 459 aaKnown RBP eCLIP17.22■□□□□ 0.35
SSR4-202ENST00000370085 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
SSR4-202ENST00000370085 MEIS3Q99687 375 aa17.22■□□□□ 0.35
SSR4-202ENST00000370085 BSDC1Q9NW68 430 aaPredicted RBP17.22■□□□□ 0.35
SSR4-202ENST00000370085 DDX19BQ9UMR2 479 aa17.22■□□□□ 0.35
SSR4-202ENST00000370085 TNNQ9UQP3 1299 aa17.22■□□□□ 0.35
SSR4-202ENST00000370085 TAF1P21675 1872 aa17.22■□□□□ 0.35
SSR4-202ENST00000370085 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
SSR4-202ENST00000370085 PLIN1O60240 522 aa17.21■□□□□ 0.35
SSR4-202ENST00000370085 LMNB1P20700 586 aa17.21■□□□□ 0.35
SSR4-202ENST00000370085 RABL6Q3YEC7 729 aaPredicted RBP17.21■□□□□ 0.35
SSR4-202ENST00000370085 DPP8Q6V1X1 898 aaPredicted RBP17.21■□□□□ 0.35
SSR4-202ENST00000370085 MPNDQ8N594 471 aa17.21■□□□□ 0.35
SSR4-202ENST00000370085 PANK1Q8TE04 598 aa17.21■□□□□ 0.35
SSR4-202ENST00000370085 PSMD1Q99460 953 aa17.21■□□□□ 0.35
SSR4-202ENST00000370085 RLBP1P12271 317 aa17.2■□□□□ 0.34
SSR4-202ENST00000370085 MVPQ14764 893 aaKnown RBP17.2■□□□□ 0.34
SSR4-202ENST00000370085 EPHA10Q5JZY3 1008 aa17.2■□□□□ 0.34
SSR4-202ENST00000370085 ANKIB1Q9P2G1 1089 aa17.2■□□□□ 0.34
SSR4-202ENST00000370085 LRRFIP2Q9Y608 721 aaKnown RBP17.2■□□□□ 0.34
SSR4-202ENST00000370085 RRP1P56182 461 aaKnown RBP17.19■□□□□ 0.34
SSR4-202ENST00000370085 KAZALD1Q96I82 304 aa17.19■□□□□ 0.34
SSR4-202ENST00000370085 VPS33BQ9H267 617 aa17.19■□□□□ 0.34
SSR4-202ENST00000370085 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
SSR4-202ENST00000370085 NFKBIEO00221 500 aa17.18■□□□□ 0.34
SSR4-202ENST00000370085 RASSF7Q02833 373 aa17.18■□□□□ 0.34
SSR4-202ENST00000370085 LDHAL6AQ6ZMR3 332 aa17.18■□□□□ 0.34
SSR4-202ENST00000370085 ANKRD44Q8N8A2 993 aa17.18■□□□□ 0.34
SSR4-202ENST00000370085 ANKRD2Q9GZV1 360 aa17.18■□□□□ 0.34
SSR4-202ENST00000370085 CNNM1Q9NRU3 951 aa17.18■□□□□ 0.34
SSR4-202ENST00000370085 RNF181Q9P0P0 153 aa17.18■□□□□ 0.34
SSR4-202ENST00000370085 SPEF2Q9C093 1822 aa17.18■□□□□ 0.34
SSR4-202ENST00000370085 LRRC37AA6NMS7 1700 aa17.18■□□□□ 0.34
SSR4-202ENST00000370085 SBF1O95248 1867 aa17.17■□□□□ 0.34
SSR4-202ENST00000370085 OLFM4Q6UX06 510 aa17.17■□□□□ 0.34
SSR4-202ENST00000370085 EYA3Q99504 573 aa17.17■□□□□ 0.34
SSR4-202ENST00000370085 COG6Q9Y2V7 657 aa17.17■□□□□ 0.34
SSR4-202ENST00000370085 XDHP47989 1333 aa17.17■□□□□ 0.34
SSR4-202ENST00000370085 CCDC88AQ3V6T2 1871 aa17.16■□□□□ 0.34
SSR4-202ENST00000370085 C6orf229H3BNL8 230 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 239.8 ms