RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 CLSTN2Q9H4D0 955 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 NEXMIFQ5QGS0 1516 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 PTCH1Q13635 1447 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 NPATQ14207 1427 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 GNAT3A8MTJ3 354 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 SLFN14P0C7P3 912 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 DHX37Q8IY37 1157 aaKnown RBP12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 CCDC191Q8NCU4 936 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 MARCKSP29966 332 aaPredicted RBP12.15□□□□□ -0.46
PRPF38B-201ENST00000370021 COL9A3Q14050 684 aaPredicted RBP12.15□□□□□ -0.46
PRPF38B-201ENST00000370021 DNAAF4Q8WXU2 420 aa12.15□□□□□ -0.46
PRPF38B-201ENST00000370021 CLTCQ00610 1675 aaKnown RBP12.15□□□□□ -0.46
PRPF38B-201ENST00000370021 HAND2P61296 217 aa12.15□□□□□ -0.46
PRPF38B-201ENST00000370021 ANKRD1Q15327 319 aa12.15□□□□□ -0.46
PRPF38B-201ENST00000370021 NCBP3Q53F19 620 aaKnown RBP12.15□□□□□ -0.46
PRPF38B-201ENST00000370021 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.46
PRPF38B-201ENST00000370021 ABCC3O15438 1527 aa12.15□□□□□ -0.46
PRPF38B-201ENST00000370021 MPRIPQ6WCQ1 1025 aa12.15□□□□□ -0.46
PRPF38B-201ENST00000370021 CCDC102AQ96A19 550 aa12.15□□□□□ -0.46
PRPF38B-201ENST00000370021 ASXL2Q76L83 1435 aa12.15□□□□□ -0.47
PRPF38B-201ENST00000370021 SLC27A2O14975 620 aa12.14□□□□□ -0.47
PRPF38B-201ENST00000370021 APOBRQ0VD83 1088 aa12.14□□□□□ -0.47
PRPF38B-201ENST00000370021 KARSQ15046 597 aaKnown RBP12.14□□□□□ -0.47
PRPF38B-201ENST00000370021 RBM33Q96EV2 1170 aaKnown RBP12.14□□□□□ -0.47
PRPF38B-201ENST00000370021 TAF6LQ9Y6J9 622 aa12.14□□□□□ -0.47
PRPF38B-201ENST00000370021 FAM193AP78312 1265 aa12.14□□□□□ -0.47
PRPF38B-201ENST00000370021 NEK1Q96PY6 1258 aa12.14□□□□□ -0.47
PRPF38B-201ENST00000370021 SEC62Q99442 399 aaKnown RBP12.14□□□□□ -0.47
PRPF38B-201ENST00000370021 SLC52A1Q9NWF4 448 aa12.14□□□□□ -0.47
PRPF38B-201ENST00000370021 XPO4Q9C0E2 1151 aaKnown RBP12.14□□□□□ -0.47
PRPF38B-201ENST00000370021 MLH3Q9UHC1 1453 aa12.14□□□□□ -0.47
PRPF38B-201ENST00000370021 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 GPATCH11Q8N954 259 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 PGBD1Q96JS3 809 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 RSPH14Q9UHP6 348 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 MAP3K2Q9Y2U5 619 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 YTHDC2Q9H6S0 1430 aaKnown RBP12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 CHGBP05060 677 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 GOLGA6L1Q8N7Z2 621 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 EVI5LQ96CN4 794 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 CCDC85AQ96PX6 553 aaPredicted RBP12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 RABEP2Q9H5N1 569 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 PUF60Q9UHX1 559 aaKnown RBP12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 A0A0D9SFI3 127 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 APPP05067 770 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 CCDC82Q8N4S0 544 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 LRRN4CLQ8ND94 238 aa12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 ZNF396Q96N95 335 aaPredicted RBP12.13□□□□□ -0.47
PRPF38B-201ENST00000370021 MAP3K19Q56UN5 1328 aa12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 CTIFO43310 598 aaKnown RBP12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 CLCN6P51797 869 aa12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 EVCP57679 992 aa12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 LEKR1Q6ZMV7 388 aa12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 TTC14Q96N46 770 aa12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 TCHHQ07283 1943 aa12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 POGZQ7Z3K3 1410 aa12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 SLC3A2P08195 630 aaKnown RBP12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 EYA1Q99502 592 aa12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 ATP10DQ9P241 1426 aa12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 PAXIP1Q6ZW49 1069 aaPredicted RBP12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 USP28Q96RU2 1077 aa12.12□□□□□ -0.47
PRPF38B-201ENST00000370021 ACEP12821 1306 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 KCNQ3O43525 872 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 SLFNL1Q499Z3 407 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 KLHL10Q6JEL2 608 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 ABTB2Q8N961 1025 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 RICTORQ6R327 1708 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 A0A0G2JS52 829 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 UBASH3AP57075 661 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 HSP90B2PQ58FF3 399 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 TMEM87AQ8NBN3 555 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 PI4K2BQ8TCG2 481 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 AK7Q96M32 723 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 FUCA2Q9BTY2 467 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 NEMFO60524 1076 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 OAS2P29728 719 aaKnown RBP12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 PPARDQ03181 441 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 SRRTQ9BXP5 876 aaKnown RBP12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 TLR7Q9NYK1 1049 aaKnown RBP12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
PRPF38B-201ENST00000370021 COL3A1P02461 1466 aaPredicted RBP12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 LZTFL1Q9NQ48 299 aa12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 VPS18Q9P253 973 aa12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 MORC2Q9Y6X9 1032 aaPredicted RBP12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 CASQ1P31415 396 aa12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 FKBP4Q02790 459 aaKnown RBP eCLIP12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 HSP90AB3PQ58FF7 597 aa12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 OLFM4Q6UX06 510 aa12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 HINFPQ9BQA5 517 aa12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 SNRKQ9NRH2 765 aa12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 PIK3R4Q99570 1358 aa12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 RBM6P78332 1123 aaKnown RBP12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 TDRD7Q8NHU6 1098 aaKnown RBP12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 CCDC12Q8WUD4 166 aaPredicted RBP12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 CHMP4CQ96CF2 233 aa12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 PLEKHA4Q9H4M7 779 aa12.1□□□□□ -0.47
PRPF38B-201ENST00000370021 CWC15Q9P013 229 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms