RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 CTSWP56202 376 aa17.32■□□□□ 0.36
HMGCS2-201ENST00000369406 TBC1D9BQ66K14 1250 aa17.32■□□□□ 0.36
HMGCS2-201ENST00000369406 AOX1Q06278 1338 aa17.32■□□□□ 0.36
HMGCS2-201ENST00000369406 LRP5O75197 1615 aa17.32■□□□□ 0.36
HMGCS2-201ENST00000369406 PHF14O94880 888 aa17.31■□□□□ 0.36
HMGCS2-201ENST00000369406 ARHGEF1Q92888 912 aaKnown RBP17.31■□□□□ 0.36
HMGCS2-201ENST00000369406 DBNLQ9UJU6 430 aaKnown RBP17.31■□□□□ 0.36
HMGCS2-201ENST00000369406 RIC1Q4ADV7 1423 aa17.31■□□□□ 0.36
HMGCS2-201ENST00000369406 RXRBP28702 533 aa17.3■□□□□ 0.36
HMGCS2-201ENST00000369406 TNNI3KQ59H18 835 aa17.3■□□□□ 0.36
HMGCS2-201ENST00000369406 BICDL1Q6ZP65 573 aa17.3■□□□□ 0.36
HMGCS2-201ENST00000369406 C3orf67Q6ZVT6 689 aa17.3■□□□□ 0.36
HMGCS2-201ENST00000369406 UTP14AQ9BVJ6 771 aaKnown RBP17.3■□□□□ 0.36
HMGCS2-201ENST00000369406 IL25Q9H293 177 aa17.3■□□□□ 0.36
HMGCS2-201ENST00000369406 NARFQ9UHQ1 456 aa17.3■□□□□ 0.36
HMGCS2-201ENST00000369406 FPGT-TNNI3KV9GXZ4 949 aa17.3■□□□□ 0.36
HMGCS2-201ENST00000369406 EYA2O00167 538 aa17.3■□□□□ 0.36
HMGCS2-201ENST00000369406 IFIT2P09913 472 aaKnown RBP17.3■□□□□ 0.36
HMGCS2-201ENST00000369406 FBXO41Q8TF61 875 aa17.3■□□□□ 0.36
HMGCS2-201ENST00000369406 SH3TC1Q8TE82 1336 aa17.29■□□□□ 0.36
HMGCS2-201ENST00000369406 IPO9Q96P70 1041 aaKnown RBP17.29■□□□□ 0.36
HMGCS2-201ENST00000369406 A0A1B0GUL6 1792 aa17.29■□□□□ 0.36
HMGCS2-201ENST00000369406 TNRC6CQ9HCJ0 1690 aaKnown RBP17.29■□□□□ 0.36
HMGCS2-201ENST00000369406 TRIM6-TRIM34B2RNG4 842 aa17.29■□□□□ 0.36
HMGCS2-201ENST00000369406 ITGA6P23229 1130 aa17.29■□□□□ 0.36
HMGCS2-201ENST00000369406 RILPL2Q969X0 211 aa17.29■□□□□ 0.36
HMGCS2-201ENST00000369406 RTCBQ9Y3I0 505 aaKnown RBP17.29■□□□□ 0.36
HMGCS2-201ENST00000369406 ZNF609O15014 1411 aa17.28■□□□□ 0.36
HMGCS2-201ENST00000369406 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
HMGCS2-201ENST00000369406 TTC41PQ6P2S7 1318 aa17.28■□□□□ 0.36
HMGCS2-201ENST00000369406 PDE8AO60658 829 aa17.28■□□□□ 0.36
HMGCS2-201ENST00000369406 CLEC4GQ6UXB4 293 aa17.28■□□□□ 0.36
HMGCS2-201ENST00000369406 DBNDD2Q9BQY9 259 aa17.28■□□□□ 0.36
HMGCS2-201ENST00000369406 ECHDC1Q9NTX5 307 aa17.28■□□□□ 0.36
HMGCS2-201ENST00000369406 CCDC57Q2TAC2 916 aa17.28■□□□□ 0.36
HMGCS2-201ENST00000369406 PARP10Q53GL7 1025 aa17.28■□□□□ 0.36
HMGCS2-201ENST00000369406 C22orf23Q9BZE7 217 aa17.28■□□□□ 0.36
HMGCS2-201ENST00000369406 ERFEQ4G0M1 354 aa17.27■□□□□ 0.36
HMGCS2-201ENST00000369406 SEC31BQ9NQW1 1179 aa17.27■□□□□ 0.36
HMGCS2-201ENST00000369406 NDUFB9Q9Y6M9 179 aa17.27■□□□□ 0.36
HMGCS2-201ENST00000369406 IFIT5Q13325 482 aaKnown RBP17.27■□□□□ 0.35
HMGCS2-201ENST00000369406 CCDC24Q8N4L8 307 aa17.27■□□□□ 0.35
HMGCS2-201ENST00000369406 AK7Q96M32 723 aa17.27■□□□□ 0.35
HMGCS2-201ENST00000369406 ZNF652Q9Y2D9 606 aa17.27■□□□□ 0.35
HMGCS2-201ENST00000369406 CIAO1O76071 339 aa17.26■□□□□ 0.35
HMGCS2-201ENST00000369406 CHMLP26374 656 aa17.26■□□□□ 0.35
HMGCS2-201ENST00000369406 TXNRD1Q16881 649 aa17.26■□□□□ 0.35
HMGCS2-201ENST00000369406 IL15P40933 162 aaPredicted RBP17.26■□□□□ 0.35
HMGCS2-201ENST00000369406 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
HMGCS2-201ENST00000369406 TIMM10P62072 90 aa17.26■□□□□ 0.35
HMGCS2-201ENST00000369406 EDC3Q96F86 508 aaKnown RBP17.25■□□□□ 0.35
HMGCS2-201ENST00000369406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.25■□□□□ 0.35
HMGCS2-201ENST00000369406 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
HMGCS2-201ENST00000369406 KIF2CQ99661 725 aa17.25■□□□□ 0.35
HMGCS2-201ENST00000369406 RIPOR2Q9Y4F9 1068 aa17.25■□□□□ 0.35
HMGCS2-201ENST00000369406 ZNF827Q17R98 1081 aa17.24■□□□□ 0.35
HMGCS2-201ENST00000369406 BOLA2Q9H3K6 86 aa17.24■□□□□ 0.35
HMGCS2-201ENST00000369406 ZPR1O75312 459 aa17.23■□□□□ 0.35
HMGCS2-201ENST00000369406 ADORA1P30542 326 aa17.23■□□□□ 0.35
HMGCS2-201ENST00000369406 SLC27A3Q5K4L6 730 aa17.23■□□□□ 0.35
HMGCS2-201ENST00000369406 TRAPPC3LQ5T215 181 aa17.23■□□□□ 0.35
HMGCS2-201ENST00000369406 MYO5AQ9Y4I1 1855 aaKnown RBP17.23■□□□□ 0.35
HMGCS2-201ENST00000369406 ARAP2Q8WZ64 1704 aa17.23■□□□□ 0.35
HMGCS2-201ENST00000369406 AKAP11Q9UKA4 1901 aa17.23■□□□□ 0.35
HMGCS2-201ENST00000369406 ANKRD18BA2A2Z9 1011 aa17.23■□□□□ 0.35
HMGCS2-201ENST00000369406 UPF2Q9HAU5 1272 aaKnown RBP17.23■□□□□ 0.35
HMGCS2-201ENST00000369406 RBM25P49756 843 aaKnown RBP17.22■□□□□ 0.35
HMGCS2-201ENST00000369406 ESYT1Q9BSJ8 1104 aa17.22■□□□□ 0.35
HMGCS2-201ENST00000369406 APBA3O96018 575 aa17.22■□□□□ 0.35
HMGCS2-201ENST00000369406 RFC4P35249 363 aa17.22■□□□□ 0.35
HMGCS2-201ENST00000369406 TAF7LQ5H9L4 462 aa17.22■□□□□ 0.35
HMGCS2-201ENST00000369406 VGLL2Q8N8G2 317 aa17.22■□□□□ 0.35
HMGCS2-201ENST00000369406 A0A1B0GUL7 405 aa17.21■□□□□ 0.35
HMGCS2-201ENST00000369406 CHGBP05060 677 aa17.21■□□□□ 0.35
HMGCS2-201ENST00000369406 NEUROD6Q96NK8 337 aa17.21■□□□□ 0.35
HMGCS2-201ENST00000369406 USP26Q9BXU7 913 aa17.21■□□□□ 0.35
HMGCS2-201ENST00000369406 ERC2O15083 957 aa17.21■□□□□ 0.35
HMGCS2-201ENST00000369406 LDHAL6AQ6ZMR3 332 aa17.21■□□□□ 0.35
HMGCS2-201ENST00000369406 RGPD3A6NKT7 1758 aaPredicted RBP17.21■□□□□ 0.35
HMGCS2-201ENST00000369406 RGPD4Q7Z3J3 1758 aa17.21■□□□□ 0.35
HMGCS2-201ENST00000369406 SNAP23O00161 211 aa17.2■□□□□ 0.34
HMGCS2-201ENST00000369406 RGL2O15211 777 aa17.2■□□□□ 0.34
HMGCS2-201ENST00000369406 NFIXQ14938 502 aa17.2■□□□□ 0.34
HMGCS2-201ENST00000369406 GPATCH3Q96I76 525 aa17.2■□□□□ 0.34
HMGCS2-201ENST00000369406 GPR108Q9NPR9 543 aa17.2■□□□□ 0.34
HMGCS2-201ENST00000369406 SLC51AQ86UW1 340 aa17.2■□□□□ 0.34
HMGCS2-201ENST00000369406 HELBQ8NG08 1087 aaPredicted RBP17.2■□□□□ 0.34
HMGCS2-201ENST00000369406 SETDB2Q96T68 719 aa17.2■□□□□ 0.34
HMGCS2-201ENST00000369406 GYS1P13807 737 aa17.19■□□□□ 0.34
HMGCS2-201ENST00000369406 ATP5JP18859 108 aa17.19■□□□□ 0.34
HMGCS2-201ENST00000369406 CNTROBQ8N137 903 aa17.19■□□□□ 0.34
HMGCS2-201ENST00000369406 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
HMGCS2-201ENST00000369406 CNNM1Q9NRU3 951 aa17.19■□□□□ 0.34
HMGCS2-201ENST00000369406 RTL9Q8NET4 1388 aa17.19■□□□□ 0.34
HMGCS2-201ENST00000369406 PLSCR1O15162 318 aa17.18■□□□□ 0.34
HMGCS2-201ENST00000369406 METTL24Q5JXM2 366 aa17.18■□□□□ 0.34
HMGCS2-201ENST00000369406 NBPF5PQ86XG9 351 aaPredicted RBP17.18■□□□□ 0.34
HMGCS2-201ENST00000369406 FBXO3Q9UK99 471 aa17.18■□□□□ 0.34
HMGCS2-201ENST00000369406 AKT1S1Q96B36 256 aa17.18■□□□□ 0.34
HMGCS2-201ENST00000369406 WTIPA6NIX2 430 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms