RNA–Protein interactions for RNA: ENST00000369236.5

GFRA1-203, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GFRA1, Length 9,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-203ENST00000369236 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
GFRA1-203ENST00000369236 MAP3K7CLP57077 242 aa13.65□□□□□ -0.22
GFRA1-203ENST00000369236 TCP11L1Q9NUJ3 509 aa13.65□□□□□ -0.22
GFRA1-203ENST00000369236 N4BP3O15049 544 aa13.65□□□□□ -0.22
GFRA1-203ENST00000369236 HCLS1P14317 486 aaPredicted RBP13.65□□□□□ -0.22
GFRA1-203ENST00000369236 CLUL1Q15846 466 aa13.65□□□□□ -0.22
GFRA1-203ENST00000369236 CETN3O15182 167 aa13.65□□□□□ -0.22
GFRA1-203ENST00000369236 GLRX3O76003 335 aaKnown RBP13.65□□□□□ -0.22
GFRA1-203ENST00000369236 HMOX1P09601 288 aa13.65□□□□□ -0.22
GFRA1-203ENST00000369236 XRCC6P12956 609 aaKnown RBP eCLIP13.65□□□□□ -0.22
GFRA1-203ENST00000369236 HDAC9Q9UKV0 1011 aa13.65□□□□□ -0.22
GFRA1-203ENST00000369236 HSP90AA5PQ58FG0 334 aa13.65□□□□□ -0.23
GFRA1-203ENST00000369236 SSRP1Q08945 709 aaKnown RBP13.64□□□□□ -0.23
GFRA1-203ENST00000369236 MUM1Q2TAK8 710 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 EHMT1Q9H9B1 1298 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 BMP15O95972 392 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 AFAP1L2Q8N4X5 818 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 SEPT10Q9P0V9 454 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 VGLL3A8MV65 326 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 KCNG4Q8TDN1 519 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 EXOC1Q9NV70 894 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 TXNDC16Q9P2K2 825 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 RUFY3Q7L099 469 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 MYO1BO43795 1136 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 CCDC26Q8TAB7 109 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 GSTA5Q7RTV2 222 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 RNF8O76064 485 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 COG7P83436 770 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 SATB1Q01826 763 aa13.64□□□□□ -0.23
GFRA1-203ENST00000369236 RPAP2Q8IXW5 612 aaPredicted RBP13.64□□□□□ -0.23
GFRA1-203ENST00000369236 NDC80O14777 642 aa13.63□□□□□ -0.23
GFRA1-203ENST00000369236 MRPS9P82933 396 aaKnown RBP13.63□□□□□ -0.23
GFRA1-203ENST00000369236 MYRIPQ8NFW9 859 aa13.63□□□□□ -0.23
GFRA1-203ENST00000369236 MICAL1Q8TDZ2 1067 aa13.63□□□□□ -0.23
GFRA1-203ENST00000369236 RAB11FIP4Q86YS3 637 aa13.63□□□□□ -0.23
GFRA1-203ENST00000369236 ERCC3P19447 782 aa13.63□□□□□ -0.23
GFRA1-203ENST00000369236 RUFY4Q6ZNE9 571 aa13.63□□□□□ -0.23
GFRA1-203ENST00000369236 RAPGEF4Q8WZA2 1011 aa13.63□□□□□ -0.23
GFRA1-203ENST00000369236 ARHGEF2Q92974 986 aaKnown RBP13.63□□□□□ -0.23
GFRA1-203ENST00000369236 PPP2R3AQ06190 1150 aa13.63□□□□□ -0.23
GFRA1-203ENST00000369236 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.63□□□□□ -0.23
GFRA1-203ENST00000369236 PNISRQ8TF01 805 aaKnown RBP13.63□□□□□ -0.23
GFRA1-203ENST00000369236 UBLCP1Q8WVY7 318 aaPredicted RBP13.63□□□□□ -0.23
GFRA1-203ENST00000369236 EIF2AQ9BY44 585 aaKnown RBP13.63□□□□□ -0.23
GFRA1-203ENST00000369236 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
GFRA1-203ENST00000369236 VIMP08670 466 aaKnown RBP13.62□□□□□ -0.23
GFRA1-203ENST00000369236 SPTY2D1Q68D10 685 aaPredicted RBP13.62□□□□□ -0.23
GFRA1-203ENST00000369236 FKBP4Q02790 459 aaKnown RBP eCLIP13.62□□□□□ -0.23
GFRA1-203ENST00000369236 FERMT3Q86UX7 667 aa13.62□□□□□ -0.23
GFRA1-203ENST00000369236 UBA5Q9GZZ9 404 aa13.62□□□□□ -0.23
GFRA1-203ENST00000369236 SNX16P57768 344 aa13.62□□□□□ -0.23
GFRA1-203ENST00000369236 HMG20BQ9P0W2 317 aa13.62□□□□□ -0.23
GFRA1-203ENST00000369236 GSDMBQ8TAX9 411 aa13.62□□□□□ -0.23
GFRA1-203ENST00000369236 SIL1Q9H173 461 aa13.62□□□□□ -0.23
GFRA1-203ENST00000369236 KCNK9Q9NPC2 374 aa13.62□□□□□ -0.23
GFRA1-203ENST00000369236 PHLDB3Q6NSJ2 640 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 AIDAQ96BJ3 306 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 KIF1BPQ96EK5 621 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 SLC12A7Q9Y666 1083 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 PDCD7Q8N8D1 485 aaKnown RBP13.61□□□□□ -0.23
GFRA1-203ENST00000369236 UTP11Q9Y3A2 253 aaKnown RBP13.61□□□□□ -0.23
GFRA1-203ENST00000369236 SLC4A8Q2Y0W8 1093 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 CNGA4Q8IV77 575 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 IFT20Q8IY31 132 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 SYKP43405 635 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 TRIM47Q96LD4 638 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 WDR97A6NE52 1622 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 SDCCAG8Q86SQ7 713 aaPredicted RBP13.61□□□□□ -0.23
GFRA1-203ENST00000369236 LRRD1A4D1F6 860 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 GJB2P29033 226 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 CDCA7LQ96GN5 454 aa13.61□□□□□ -0.23
GFRA1-203ENST00000369236 ARL1P40616 181 aaPredicted RBP13.61□□□□□ -0.23
GFRA1-203ENST00000369236 SLC4A2P04920 1241 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 EXOSC9Q06265 439 aaKnown RBP13.6□□□□□ -0.23
GFRA1-203ENST00000369236 SRGAP3O43295 1099 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 FHOD3Q2V2M9 1422 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 ACTN4O43707 911 aaKnown RBP13.6□□□□□ -0.23
GFRA1-203ENST00000369236 CSRNP2Q9H175 543 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 ERICH3Q5RHP9 1530 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 PHACTR2O75167 634 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 CALCOCO2Q13137 446 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 TBC1D32Q96NH3 1257 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 BCAR3O75815 825 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
GFRA1-203ENST00000369236 MINK1Q8N4C8 1332 aaPredicted RBP13.6□□□□□ -0.23
GFRA1-203ENST00000369236 GOLGA6BA6NDN3 693 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 PPP2R1AP30153 589 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 CHMP4BP1P59074 171 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 FAF1Q9UNN5 650 aaPredicted RBP13.6□□□□□ -0.23
GFRA1-203ENST00000369236 CCDC194A0A1B0GVG4 234 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 BICDL2A1A5D9 508 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 CEP104O60308 925 aa13.6□□□□□ -0.23
GFRA1-203ENST00000369236 TPX2Q9ULW0 747 aaKnown RBP13.6□□□□□ -0.23
GFRA1-203ENST00000369236 PPP1R7Q15435 360 aa13.59□□□□□ -0.23
GFRA1-203ENST00000369236 SMARCC2Q8TAQ2 1214 aa13.59□□□□□ -0.23
GFRA1-203ENST00000369236 PSMD1Q99460 953 aa13.59□□□□□ -0.23
GFRA1-203ENST00000369236 RNF41Q9H4P4 317 aaPredicted RBP13.59□□□□□ -0.23
GFRA1-203ENST00000369236 GOLGA8BA8MQT2 603 aa13.59□□□□□ -0.23
GFRA1-203ENST00000369236 LRRC23Q53EV4 343 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms