RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 IQCGQ9H095 443 aaKnown RBP11.93□□□□□ -0.5
PRDM1-201ENST00000369089 CD109Q6YHK3 1445 aa11.93□□□□□ -0.5
PRDM1-201ENST00000369089 HMOX1P09601 288 aa11.93□□□□□ -0.5
PRDM1-201ENST00000369089 LACTBP83111 547 aaPredicted RBP11.93□□□□□ -0.5
PRDM1-201ENST00000369089 CRYMQ14894 314 aa11.93□□□□□ -0.5
PRDM1-201ENST00000369089 PCMTD1Q96MG8 357 aaPredicted RBP11.93□□□□□ -0.5
PRDM1-201ENST00000369089 TXNDC2Q86VQ3 553 aa11.92□□□□□ -0.5
PRDM1-201ENST00000369089 TPX2Q9ULW0 747 aaKnown RBP11.92□□□□□ -0.5
PRDM1-201ENST00000369089 CNPY2Q9Y2B0 182 aa11.92□□□□□ -0.5
PRDM1-201ENST00000369089 RPGRIP1LQ68CZ1 1315 aa11.92□□□□□ -0.5
PRDM1-201ENST00000369089 STX6O43752 255 aa11.92□□□□□ -0.5
PRDM1-201ENST00000369089 NBPF10Q6P3W6 841 aaKnown RBP11.92□□□□□ -0.5
PRDM1-201ENST00000369089 SYNE3Q6ZMZ3 975 aa11.92□□□□□ -0.5
PRDM1-201ENST00000369089 SPATA24Q86W54 205 aa11.92□□□□□ -0.5
PRDM1-201ENST00000369089 TMX3Q96JJ7 454 aa11.92□□□□□ -0.5
PRDM1-201ENST00000369089 PDE11AQ9HCR9 933 aa11.92□□□□□ -0.5
PRDM1-201ENST00000369089 ZNF330Q9Y3S2 320 aaPredicted RBP11.92□□□□□ -0.5
PRDM1-201ENST00000369089 GPT2Q8TD30 523 aa11.92□□□□□ -0.5
PRDM1-201ENST00000369089 MPHOSPH8Q99549 860 aa11.92□□□□□ -0.5
PRDM1-201ENST00000369089 FAM184BQ9ULE4 1060 aa11.92□□□□□ -0.5
PRDM1-201ENST00000369089 RHOXF2BP0C7M4 288 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 ME1P48163 572 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 E2F5Q15329 346 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 INF2Q27J81 1249 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 SPECC1Q5M775 1068 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 MFSD4BQ5TF39 518 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 RHOXF2Q9BQY4 288 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 RPRD2Q5VT52 1461 aaKnown RBP11.91□□□□□ -0.5
PRDM1-201ENST00000369089 PPFIA3O75145 1194 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 CDKL5O76039 1030 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 SEC31AO94979 1220 aaKnown RBP11.91□□□□□ -0.5
PRDM1-201ENST00000369089 SNUPNO95149 360 aaKnown RBP11.91□□□□□ -0.5
PRDM1-201ENST00000369089 CHMP4BP1P59074 171 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 ATP2B2Q01814 1243 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 CEBPZQ03701 1054 aaKnown RBP11.91□□□□□ -0.5
PRDM1-201ENST00000369089 LRMPQ12912 555 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 GBP7Q8N8V2 638 aaPredicted RBP11.91□□□□□ -0.5
PRDM1-201ENST00000369089 ST7Q9NRC1 585 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 ATP10BO94823 1461 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 NUP153P49790 1475 aaKnown RBP11.91□□□□□ -0.5
PRDM1-201ENST00000369089 WDHD1O75717 1129 aaPredicted RBP11.91□□□□□ -0.5
PRDM1-201ENST00000369089 ZSCAN22P10073 491 aaPredicted RBP11.91□□□□□ -0.5
PRDM1-201ENST00000369089 SCP2P22307 547 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 SLMAPQ14BN4 828 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 CCDC6Q16204 474 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 ATF7IPQ6VMQ6 1270 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 DNAJC25Q9H1X3 360 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 ZMYM3Q14202 1370 aa11.91□□□□□ -0.5
PRDM1-201ENST00000369089 TPD52L2O43399 206 aaKnown RBP11.9□□□□□ -0.5
PRDM1-201ENST00000369089 PSMA5P28066 241 aa11.9□□□□□ -0.5
PRDM1-201ENST00000369089 ZGPATQ8N5A5 531 aaKnown RBP11.9□□□□□ -0.5
PRDM1-201ENST00000369089 PUF60Q9UHX1 559 aaKnown RBP11.9□□□□□ -0.5
PRDM1-201ENST00000369089 RABEP2Q9H5N1 569 aa11.9□□□□□ -0.5
PRDM1-201ENST00000369089 PRPHP41219 470 aa11.9□□□□□ -0.5
PRDM1-201ENST00000369089 PSME1Q06323 249 aa11.9□□□□□ -0.5
PRDM1-201ENST00000369089 CCDC40Q4G0X9 1142 aa11.9□□□□□ -0.5
PRDM1-201ENST00000369089 CAPRIN2Q6IMN6 1127 aaKnown RBP11.9□□□□□ -0.5
PRDM1-201ENST00000369089 BATF3Q9NR55 127 aa11.9□□□□□ -0.5
PRDM1-201ENST00000369089 DACH1Q9UI36 760 aa11.9□□□□□ -0.5
PRDM1-201ENST00000369089 SYT1P21579 422 aa11.9□□□□□ -0.51
PRDM1-201ENST00000369089 CORO7P57737 925 aa11.9□□□□□ -0.51
PRDM1-201ENST00000369089 TUBB2AQ13885 445 aa11.9□□□□□ -0.51
PRDM1-201ENST00000369089 TSNAXIP1Q2TAA8 658 aa11.9□□□□□ -0.51
PRDM1-201ENST00000369089 KLHL10Q6JEL2 608 aa11.9□□□□□ -0.51
PRDM1-201ENST00000369089 SMARCC2Q8TAQ2 1214 aa11.9□□□□□ -0.51
PRDM1-201ENST00000369089 TUBB2BQ9BVA1 445 aa11.9□□□□□ -0.51
PRDM1-201ENST00000369089 RMI1Q9H9A7 625 aa11.9□□□□□ -0.51
PRDM1-201ENST00000369089 PCDHB15Q9Y5E8 787 aa11.9□□□□□ -0.51
PRDM1-201ENST00000369089 UGGT2Q9NYU1 1516 aa11.9□□□□□ -0.51
PRDM1-201ENST00000369089 CKAP4Q07065 602 aaKnown RBP11.89□□□□□ -0.51
PRDM1-201ENST00000369089 TEFQ10587 303 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 MAP7D1Q3KQU3 841 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 PNMA8AQ86V59 439 aaPredicted RBP11.89□□□□□ -0.51
PRDM1-201ENST00000369089 DTNBP1Q96EV8 351 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 YIPF3Q9GZM5 350 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 VCX3BQ9H321 246 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 VCX3AQ9NNX9 186 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 ADGRL1O94910 1474 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 FAM204AQ9H8W3 233 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 ATP11AP98196 1134 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 DYNC1I2Q13409 638 aaKnown RBP11.89□□□□□ -0.51
PRDM1-201ENST00000369089 NAA30Q147X3 362 aaPredicted RBP11.89□□□□□ -0.51
PRDM1-201ENST00000369089 PPP1R12CQ9BZL4 782 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 FAN1Q9Y2M0 1017 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 SLC30A9Q6PML9 568 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 CABP1Q9NZU7 370 aa11.89□□□□□ -0.51
PRDM1-201ENST00000369089 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.89□□□□□ -0.51
PRDM1-201ENST00000369089 ATAD2Q6PL18 1390 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 CTAGE9A4FU28 777 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 ABCD1P33897 745 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 SESN3P58005 492 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 STK38Q15208 465 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 CPLX4Q7Z7G2 160 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 ITFG2Q969R8 447 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 OSBPL9Q96SU4 736 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 RARSP54136 660 aaKnown RBP11.88□□□□□ -0.51
PRDM1-201ENST00000369089 GNGT1P63211 74 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 ZBTB17Q13105 803 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 STIM1Q13586 685 aa11.88□□□□□ -0.51
PRDM1-201ENST00000369089 MAP7Q14244 749 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms