RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CCDC57Q2TAC2 916 aa29.42■■■□□ 2.3
SNX3-203ENST00000368979 BICDL1Q6ZP65 573 aa29.42■■■□□ 2.3
SNX3-203ENST00000368979 SETDB2Q96T68 719 aa29.42■■■□□ 2.3
SNX3-203ENST00000368979 STAP2Q9UGK3 403 aa29.42■■■□□ 2.3
SNX3-203ENST00000368979 NUTM1Q86Y26 1132 aa29.41■■■□□ 2.3
SNX3-203ENST00000368979 CLASRPQ8N2M8 674 aaKnown RBP29.41■■■□□ 2.3
SNX3-203ENST00000368979 LRP5O75197 1615 aa29.41■■■□□ 2.3
SNX3-203ENST00000368979 HCLS1P14317 486 aaPredicted RBP29.4■■■□□ 2.3
SNX3-203ENST00000368979 GSPT1P15170 499 aaKnown RBP29.4■■■□□ 2.3
SNX3-203ENST00000368979 GREM2Q9H772 168 aa29.4■■■□□ 2.3
SNX3-203ENST00000368979 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.4■■■□□ 2.3
SNX3-203ENST00000368979 AOX1Q06278 1338 aa29.4■■■□□ 2.3
SNX3-203ENST00000368979 CIAO1O76071 339 aa29.4■■■□□ 2.3
SNX3-203ENST00000368979 IFIT5Q13325 482 aaKnown RBP29.4■■■□□ 2.3
SNX3-203ENST00000368979 CCDC85AQ96PX6 553 aaPredicted RBP29.4■■■□□ 2.3
SNX3-203ENST00000368979 NYXQ9GZU5 481 aa29.4■■■□□ 2.3
SNX3-203ENST00000368979 FBXO3Q9UK99 471 aa29.4■■■□□ 2.3
SNX3-203ENST00000368979 ATG9AQ7Z3C6 839 aa29.39■■■□□ 2.3
SNX3-203ENST00000368979 ZNF594Q96JF6 807 aaPredicted RBP29.39■■■□□ 2.3
SNX3-203ENST00000368979 CASZ1Q86V15 1759 aa29.39■■■□□ 2.29
SNX3-203ENST00000368979 EYA2O00167 538 aa29.38■■■□□ 2.29
SNX3-203ENST00000368979 GYS1P13807 737 aa29.38■■■□□ 2.29
SNX3-203ENST00000368979 ITGA6P23229 1130 aa29.38■■■□□ 2.29
SNX3-203ENST00000368979 ERFEQ4G0M1 354 aa29.38■■■□□ 2.29
SNX3-203ENST00000368979 CAMKK2Q96RR4 588 aa29.38■■■□□ 2.29
SNX3-203ENST00000368979 RTL9Q8NET4 1388 aa29.37■■■□□ 2.29
SNX3-203ENST00000368979 CARMIL3Q8ND23 1372 aa29.37■■■□□ 2.29
SNX3-203ENST00000368979 ANKRD18BA2A2Z9 1011 aa29.36■■■□□ 2.29
SNX3-203ENST00000368979 IL15P40933 162 aaPredicted RBP29.36■■■□□ 2.29
SNX3-203ENST00000368979 UPF1Q92900 1129 aaKnown RBP eCLIP29.36■■■□□ 2.29
SNX3-203ENST00000368979 TFCP2L1Q9NZI6 479 aa29.36■■■□□ 2.29
SNX3-203ENST00000368979 ABCC12Q96J65 1359 aa29.36■■■□□ 2.29
SNX3-203ENST00000368979 NFIXQ14938 502 aa29.35■■■□□ 2.29
SNX3-203ENST00000368979 SLC10A5Q5PT55 438 aa29.35■■■□□ 2.29
SNX3-203ENST00000368979 TFCP2Q12800 502 aa29.35■■■□□ 2.29
SNX3-203ENST00000368979 EZH2Q15910 746 aaKnown RBP29.35■■■□□ 2.29
SNX3-203ENST00000368979 LRRC24Q50LG9 513 aa29.35■■■□□ 2.29
SNX3-203ENST00000368979 AACSQ86V21 672 aa29.35■■■□□ 2.29
SNX3-203ENST00000368979 NBPF5PQ86XG9 351 aaPredicted RBP29.35■■■□□ 2.29
SNX3-203ENST00000368979 EAF2Q96CJ1 260 aaPredicted RBP29.35■■■□□ 2.29
SNX3-203ENST00000368979 RBM19Q9Y4C8 960 aaKnown RBP29.35■■■□□ 2.29
SNX3-203ENST00000368979 EN1Q05925 392 aaPredicted RBP29.34■■■□□ 2.29
SNX3-203ENST00000368979 TSHZ3Q63HK5 1081 aa29.34■■■□□ 2.29
SNX3-203ENST00000368979 PUS3Q9BZE2 481 aaKnown RBP29.34■■■□□ 2.29
SNX3-203ENST00000368979 IFIT2P09913 472 aaKnown RBP29.33■■■□□ 2.29
SNX3-203ENST00000368979 CCDC152Q4G0S7 254 aa29.33■■■□□ 2.29
SNX3-203ENST00000368979 TAF7LQ5H9L4 462 aa29.33■■■□□ 2.29
SNX3-203ENST00000368979 TTC41PQ6P2S7 1318 aa29.32■■■□□ 2.28
SNX3-203ENST00000368979 TPTE2Q6XPS3 522 aa29.32■■■□□ 2.28
SNX3-203ENST00000368979 FLAD1Q8NFF5 587 aa29.32■■■□□ 2.28
SNX3-203ENST00000368979 TNNI3KQ59H18 835 aa29.31■■■□□ 2.28
SNX3-203ENST00000368979 PI4K2BQ8TCG2 481 aa29.31■■■□□ 2.28
SNX3-203ENST00000368979 FPGT-TNNI3KV9GXZ4 949 aa29.31■■■□□ 2.28
SNX3-203ENST00000368979 GTF2E1P29083 439 aaPredicted RBP29.3■■■□□ 2.28
SNX3-203ENST00000368979 SF3B3Q15393 1217 aaKnown RBP29.3■■■□□ 2.28
SNX3-203ENST00000368979 COL23A1Q86Y22 540 aaPredicted RBP29.3■■■□□ 2.28
SNX3-203ENST00000368979 GPR108Q9NPR9 543 aa29.3■■■□□ 2.28
SNX3-203ENST00000368979 RIC1Q4ADV7 1423 aa29.3■■■□□ 2.28
SNX3-203ENST00000368979 QSER1Q2KHR3 1735 aa29.3■■■□□ 2.28
SNX3-203ENST00000368979 TM4SF1P30408 202 aa29.3■■■□□ 2.28
SNX3-203ENST00000368979 TNRC6CQ9HCJ0 1690 aaKnown RBP29.29■■■□□ 2.28
SNX3-203ENST00000368979 SDSP20132 328 aa29.29■■■□□ 2.28
SNX3-203ENST00000368979 BAG6P46379 1132 aa29.29■■■□□ 2.28
SNX3-203ENST00000368979 SF3B2Q13435 895 aaKnown RBP29.29■■■□□ 2.28
SNX3-203ENST00000368979 ZNF609O15014 1411 aa29.29■■■□□ 2.28
SNX3-203ENST00000368979 C3orf67Q6ZVT6 689 aa29.28■■■□□ 2.28
SNX3-203ENST00000368979 CCDC8Q9H0W5 538 aaPredicted RBP29.28■■■□□ 2.28
SNX3-203ENST00000368979 ECHDC1Q9NTX5 307 aa29.28■■■□□ 2.28
SNX3-203ENST00000368979 TLR7Q9NYK1 1049 aaKnown RBP29.28■■■□□ 2.28
SNX3-203ENST00000368979 RIPOR2Q9Y4F9 1068 aa29.28■■■□□ 2.28
SNX3-203ENST00000368979 PNPLA7Q6ZV29 1317 aa29.28■■■□□ 2.28
SNX3-203ENST00000368979 LDHAL6AQ6ZMR3 332 aa29.27■■■□□ 2.28
SNX3-203ENST00000368979 GPATCH3Q96I76 525 aa29.27■■■□□ 2.28
SNX3-203ENST00000368979 ANO8Q9HCE9 1232 aaPredicted RBP29.26■■■□□ 2.27
SNX3-203ENST00000368979 SEC31BQ9NQW1 1179 aa29.26■■■□□ 2.27
SNX3-203ENST00000368979 COL4A1P02462 1669 aa29.25■■■□□ 2.27
SNX3-203ENST00000368979 ERC2O15083 957 aa29.25■■■□□ 2.27
SNX3-203ENST00000368979 CDC45O75419 566 aa29.25■■■□□ 2.27
SNX3-203ENST00000368979 GLRX3O76003 335 aaKnown RBP29.25■■■□□ 2.27
SNX3-203ENST00000368979 CNBD1Q8NA66 436 aa29.25■■■□□ 2.27
SNX3-203ENST00000368979 CEP126Q9P2H0 1117 aa29.25■■■□□ 2.27
SNX3-203ENST00000368979 DBNLQ9UJU6 430 aaKnown RBP29.25■■■□□ 2.27
SNX3-203ENST00000368979 SPEF2Q9C093 1822 aa29.24■■■□□ 2.27
SNX3-203ENST00000368979 SEC24BO95487 1268 aa29.24■■■□□ 2.27
SNX3-203ENST00000368979 NLRP3Q96P20 1036 aa29.24■■■□□ 2.27
SNX3-203ENST00000368979 CNNM1Q9NRU3 951 aa29.24■■■□□ 2.27
SNX3-203ENST00000368979 DDR1Q08345 913 aa29.23■■■□□ 2.27
SNX3-203ENST00000368979 SLC15A2Q16348 729 aa29.23■■■□□ 2.27
SNX3-203ENST00000368979 SERPINB2P05120 415 aa29.22■■■□□ 2.27
SNX3-203ENST00000368979 PRR5LQ6MZQ0 368 aa29.22■■■□□ 2.27
SNX3-203ENST00000368979 TBC1D9Q6ZT07 1266 aa29.22■■■□□ 2.27
SNX3-203ENST00000368979 DEFB132Q7Z7B7 95 aa29.22■■■□□ 2.27
SNX3-203ENST00000368979 NRXN2Q9P2S2 1712 aa29.22■■■□□ 2.27
SNX3-203ENST00000368979 POLRMTO00411 1230 aaKnown RBP29.21■■■□□ 2.27
SNX3-203ENST00000368979 NLGN1Q8N2Q7 840 aa29.21■■■□□ 2.27
SNX3-203ENST00000368979 CCDC24Q8N4L8 307 aa29.21■■■□□ 2.27
SNX3-203ENST00000368979 VGLL2Q8N8G2 317 aa29.21■■■□□ 2.27
SNX3-203ENST00000368979 DBNDD2Q9BQY9 259 aa29.21■■■□□ 2.27
SNX3-203ENST00000368979 STK32BQ9NY57 414 aa29.21■■■□□ 2.27
SNX3-203ENST00000368979 MSH5O43196 834 aa29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms