RNA–Protein interactions for RNA: ENST00000368902.1

SCNM1-201, Transcript of sodium channel modifier 1, humanhuman

TSL 2 BASIC

Gene SCNM1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-201ENST00000368902 STK31Q9BXU1 1019 aa11.28□□□□□ -0.6
SCNM1-201ENST00000368902 MYH16Q9H6N6 1097 aa11.28□□□□□ -0.6
SCNM1-201ENST00000368902 PHAXQ9H814 394 aaKnown RBP11.28□□□□□ -0.6
SCNM1-201ENST00000368902 SPINK5Q9NQ38 1064 aaPredicted RBP11.28□□□□□ -0.6
SCNM1-201ENST00000368902 WBP1LQ9NX94 342 aa11.28□□□□□ -0.6
SCNM1-201ENST00000368902 ABT1Q9ULW3 272 aaKnown RBP11.28□□□□□ -0.6
SCNM1-201ENST00000368902 LTBP1Q14766 1721 aa11.28□□□□□ -0.6
SCNM1-201ENST00000368902 FANCIQ9NVI1 1328 aa11.28□□□□□ -0.6
SCNM1-201ENST00000368902 RIC1Q4ADV7 1423 aa11.27□□□□□ -0.6
SCNM1-201ENST00000368902 ATP5J2-PTCD1G3V325 749 aa11.27□□□□□ -0.61
SCNM1-201ENST00000368902 FZD9O00144 591 aa11.27□□□□□ -0.61
SCNM1-201ENST00000368902 VAMP4O75379 141 aa11.27□□□□□ -0.61
SCNM1-201ENST00000368902 DDX58O95786 925 aaKnown RBP11.27□□□□□ -0.61
SCNM1-201ENST00000368902 HSPA8P11142 646 aaKnown RBP11.27□□□□□ -0.61
SCNM1-201ENST00000368902 EXOSC9Q06265 439 aaKnown RBP11.27□□□□□ -0.61
SCNM1-201ENST00000368902 SLC10A5Q5PT55 438 aa11.27□□□□□ -0.61
SCNM1-201ENST00000368902 NLRP3Q96P20 1036 aa11.27□□□□□ -0.61
SCNM1-201ENST00000368902 PSMD1Q99460 953 aa11.27□□□□□ -0.61
SCNM1-201ENST00000368902 ISCA1Q9BUE6 129 aa11.27□□□□□ -0.61
SCNM1-201ENST00000368902 TRMT112Q9UI30 125 aaKnown RBP11.27□□□□□ -0.61
SCNM1-201ENST00000368902 IBTKQ9P2D0 1353 aaPredicted RBP11.27□□□□□ -0.61
SCNM1-201ENST00000368902 SLC4A2P04920 1241 aa11.26□□□□□ -0.61
SCNM1-201ENST00000368902 TRIM28Q13263 835 aaKnown RBP11.26□□□□□ -0.61
SCNM1-201ENST00000368902 CRY2Q49AN0 593 aa11.26□□□□□ -0.61
SCNM1-201ENST00000368902 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
SCNM1-201ENST00000368902 CNTROBQ8N137 903 aa11.26□□□□□ -0.61
SCNM1-201ENST00000368902 SYNE4Q8N205 404 aa11.26□□□□□ -0.61
SCNM1-201ENST00000368902 JDP2Q8WYK2 163 aa11.26□□□□□ -0.61
SCNM1-201ENST00000368902 LMOD1P29536 600 aaPredicted RBP11.25□□□□□ -0.61
SCNM1-201ENST00000368902 HOXA10P31260 410 aaPredicted RBP11.25□□□□□ -0.61
SCNM1-201ENST00000368902 MAP2K1Q02750 393 aaPredicted RBP11.25□□□□□ -0.61
SCNM1-201ENST00000368902 DEFB115Q30KQ5 88 aa11.25□□□□□ -0.61
SCNM1-201ENST00000368902 MIER1Q8N108 512 aa11.25□□□□□ -0.61
SCNM1-201ENST00000368902 RPGRQ92834 1020 aaKnown RBP11.25□□□□□ -0.61
SCNM1-201ENST00000368902 ZNF428Q96B54 188 aa11.25□□□□□ -0.61
SCNM1-201ENST00000368902 ABHD8Q96I13 439 aa11.25□□□□□ -0.61
SCNM1-201ENST00000368902 RBM17Q96I25 401 aaKnown RBP11.25□□□□□ -0.61
SCNM1-201ENST00000368902 GJA3Q9Y6H8 435 aa11.25□□□□□ -0.61
SCNM1-201ENST00000368902 WDR33Q9C0J8 1336 aaKnown RBP11.25□□□□□ -0.61
SCNM1-201ENST00000368902 HCLS1P14317 486 aaPredicted RBP11.24□□□□□ -0.61
SCNM1-201ENST00000368902 EIF6P56537 245 aaKnown RBP11.24□□□□□ -0.61
SCNM1-201ENST00000368902 FAM161AQ3B820 660 aa11.24□□□□□ -0.61
SCNM1-201ENST00000368902 KSR2Q6VAB6 950 aa11.24□□□□□ -0.61
SCNM1-201ENST00000368902 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
SCNM1-201ENST00000368902 MYD88Q99836 296 aa11.24□□□□□ -0.61
SCNM1-201ENST00000368902 METTL22Q9BUU2 404 aaPredicted RBP11.24□□□□□ -0.61
SCNM1-201ENST00000368902 SH3TC1Q8TE82 1336 aa11.24□□□□□ -0.61
SCNM1-201ENST00000368902 ZNF521Q96K83 1311 aa11.24□□□□□ -0.61
SCNM1-201ENST00000368902 PI4KAP2A4QPH2 592 aa11.23□□□□□ -0.61
SCNM1-201ENST00000368902 SCNN1DP51172 638 aa11.23□□□□□ -0.61
SCNM1-201ENST00000368902 GRM1Q13255 1194 aa11.23□□□□□ -0.61
SCNM1-201ENST00000368902 G2E3Q7L622 706 aa11.23□□□□□ -0.61
SCNM1-201ENST00000368902 PI4KAP1Q8N8J0 262 aa11.23□□□□□ -0.61
SCNM1-201ENST00000368902 FAM89AQ96GI7 184 aa11.23□□□□□ -0.61
SCNM1-201ENST00000368902 CRAMP1Q96RY5 1269 aa11.23□□□□□ -0.61
SCNM1-201ENST00000368902 VPS33BQ9H267 617 aa11.23□□□□□ -0.61
SCNM1-201ENST00000368902 MAP3K2Q9Y2U5 619 aa11.23□□□□□ -0.61
SCNM1-201ENST00000368902 E9PSI1 815 aa11.22□□□□□ -0.61
SCNM1-201ENST00000368902 PPEF1O14829 653 aaPredicted RBP11.22□□□□□ -0.61
SCNM1-201ENST00000368902 ECE1P42892 770 aa11.22□□□□□ -0.61
SCNM1-201ENST00000368902 LARGE2Q8N3Y3 721 aa11.22□□□□□ -0.61
SCNM1-201ENST00000368902 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
SCNM1-201ENST00000368902 CAPNS2Q96L46 248 aa11.22□□□□□ -0.61
SCNM1-201ENST00000368902 TRPM7Q96QT4 1865 aa11.22□□□□□ -0.61
SCNM1-201ENST00000368902 BEGAINQ9BUH8 593 aa11.22□□□□□ -0.61
SCNM1-201ENST00000368902 TMX4Q9H1E5 349 aaPredicted RBP11.22□□□□□ -0.61
SCNM1-201ENST00000368902 IRS4O14654 1257 aaPredicted RBP11.21□□□□□ -0.61
SCNM1-201ENST00000368902 SLC34A2O95436 690 aa11.21□□□□□ -0.61
SCNM1-201ENST00000368902 SLFN5Q08AF3 891 aa11.21□□□□□ -0.61
SCNM1-201ENST00000368902 NEXNQ0ZGT2 675 aa11.21□□□□□ -0.61
SCNM1-201ENST00000368902 FLIIQ13045 1269 aa11.21□□□□□ -0.61
SCNM1-201ENST00000368902 RTL5Q5HYW3 569 aaPredicted RBP11.21□□□□□ -0.61
SCNM1-201ENST00000368902 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
SCNM1-201ENST00000368902 SLC51AQ86UW1 340 aa11.21□□□□□ -0.61
SCNM1-201ENST00000368902 NIM1KQ8IY84 436 aa11.21□□□□□ -0.61
SCNM1-201ENST00000368902 ZBTB38Q8NAP3 1195 aaPredicted RBP11.21□□□□□ -0.61
SCNM1-201ENST00000368902 CWC25Q9NXE8 425 aaPredicted RBP11.21□□□□□ -0.61
SCNM1-201ENST00000368902 TRAF5O00463 557 aa11.2□□□□□ -0.62
SCNM1-201ENST00000368902 BBOX1O75936 387 aa11.2□□□□□ -0.62
SCNM1-201ENST00000368902 HSP90B1P14625 803 aaKnown RBP11.2□□□□□ -0.62
SCNM1-201ENST00000368902 EPS15P42566 896 aa11.2□□□□□ -0.62
SCNM1-201ENST00000368902 FMR1Q06787 632 aaKnown RBP eCLIP11.2□□□□□ -0.62
SCNM1-201ENST00000368902 FKBP5Q13451 457 aaPredicted RBP11.2□□□□□ -0.62
SCNM1-201ENST00000368902 CYP4F22Q6NT55 531 aa11.2□□□□□ -0.62
SCNM1-201ENST00000368902 USP50Q70EL3 339 aaPredicted RBP11.2□□□□□ -0.62
SCNM1-201ENST00000368902 ANKRD36CQ5JPF3 1778 aa11.19□□□□□ -0.62
SCNM1-201ENST00000368902 PPIP5K2O43314 1243 aa11.19□□□□□ -0.62
SCNM1-201ENST00000368902 PCCAP05165 728 aaPredicted RBP11.19□□□□□ -0.62
SCNM1-201ENST00000368902 IGKV5-2P06315 115 aa11.19□□□□□ -0.62
SCNM1-201ENST00000368902 SF3B3Q15393 1217 aaKnown RBP11.19□□□□□ -0.62
SCNM1-201ENST00000368902 SUPT20HQ8NEM7 779 aa11.19□□□□□ -0.62
SCNM1-201ENST00000368902 DNAAF4Q8WXU2 420 aa11.19□□□□□ -0.62
SCNM1-201ENST00000368902 JARID2Q92833 1246 aaPredicted RBP11.19□□□□□ -0.62
SCNM1-201ENST00000368902 CDCA7LQ96GN5 454 aa11.19□□□□□ -0.62
SCNM1-201ENST00000368902 TLL2Q9Y6L7 1015 aa11.19□□□□□ -0.62
SCNM1-201ENST00000368902 CCDC85CA6NKD9 419 aa11.18□□□□□ -0.62
SCNM1-201ENST00000368902 GRAPQ13588 217 aa11.18□□□□□ -0.62
SCNM1-201ENST00000368902 GRAPLQ8TC17 118 aaPredicted RBP11.18□□□□□ -0.62
SCNM1-201ENST00000368902 GPR101Q96P66 508 aaPredicted RBP11.18□□□□□ -0.62
SCNM1-201ENST00000368902 TSKSQ9UJT2 592 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms